CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM253160

Assay name 6h into an extended night

GSE experiment GSE10016: Expression data of Arabidopsis thaliana rosettes in an extended night

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
240.4 100.0 98.6 At3g62950 825470 glutaredoxin family protein F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMBFO O.I. C.G. H.G.
74.5 99.9 283.7 At1g03090 838362 MCCA MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. O.I. C.G. H.G.
65.6 99.8 78.3 At2g43400 818941 ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase) Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods. O.I. C.G. H.G.
52.9 99.8 33.7 At4g15690 827246 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB O.I. C.G. H.G.
45.0 99.8 87.0 At1g76410 843974 ATL8 F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV O.I. C.G. H.G.
44.8 99.8 288.5 At2g29670 817517 binding F:binding;P:unknown;C:chloroplast;PBOAM O.I. C.G. H.G.
44.7 99.8 71.7 At1g79700 844309 ovule development protein, putative F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POB O.I. C.G. H.G.
43.0 99.8 148.7 At3g13450 820547 DIN4 (DARK INDUCIBLE 4) branched chain alpha-keto acid dehydrogenase E1 beta O.I. C.G. H.G.
41.9 99.8 103.5 At1g21400 838739 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
38.6 99.8 203.2 At1g10070 837543 ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2) Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. O.I. C.G. H.G.
38.3 99.8 217.6 At1g06570 837168 PDS1 (PHYTOENE DESATURATION 1) Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants. O.I. C.G. H.G.
37.5 99.7 153.8 At1g72060 843537 serine-type endopeptidase inhibitor F:serine-type endopeptidase inhibitor activity;P:response to oxidative stress;C:endomembrane system;P O.I. C.G. H.G.
36.1 99.7 428.4 At3g47340 823888 ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1) encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. C.G. H.G.
34.8 99.7 209.2 At5g54080 835494 HGO (HOMOGENTISATE 1,2-DIOXYGENASE) homogentisate 1,2-dioxygenase O.I. C.G. H.G.
32.6 99.7 77.0 At1g54740 841915 - F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBF O.I. C.G. H.G.
31.7 99.7 189.4 At5g21170 832243 5'-AMP-activated protein kinase beta-2 subunit, putative F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB O.I. C.G. H.G.
30.7 99.7 140.1 At3g45300 823668 IVD (ISOVALERYL-COA-DEHYDROGENASE) Encodes isovaleryl-coenzyme a dehydrogenase. O.I. C.G. H.G.
29.5 99.7 111.0 At5g53970 835480 aminotransferase, putative encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment O.I. C.G. H.G.
29.2 99.7 134.7 At5g16340 831495 AMP-binding protein, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
29.0 99.7 23.5 At4g15700 827247 glutaredoxin family protein F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB O.I. C.G. H.G.
28.4 99.7 138.3 At5g18170 831935 GDH1 (GLUTAMATE DEHYDROGENASE 1) Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells. O.I. C.G. H.G.
28.2 99.7 372.6 At3g13750 820584 BGAL1 (Beta galactosidase 1) beta-galactosidase, glycosyl hydrolase family 35 O.I. C.G. H.G.
27.8 99.7 38.0 At5g55700 835664 BAM4 (BETA-AMYLASE 4) In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role. O.I. C.G. H.G.
27.3 99.7 159.0 At3g06850 819869 BCE2 dihydrolipoamide branched chain acyltransferase O.I. C.G. H.G.
26.7 99.7 52.4 At3g61210 825293 embryo-abundant protein-related F:unknown;P:unknown;C:cellular_component unknown;BPFOMA O.I. C.G. H.G.
26.1 99.7 111.1 At1g03610 838961 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
25.8 99.7 140.8 At1g58180 842185 carbonic anhydrase family protein / carbonate dehydratase family protein F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:mitochondrion;BOPFMA O.I. C.G. H.G.
25.6 99.7 104.8 At4g03510 825654 RMA1 RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. O.I. C.G. H.G.
24.4 99.6 110.1 At4g36730 829826 GBF1 member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box O.I. C.G. H.G.
24.2 99.6 322.6 At3g57520 824919 AtSIP2 (Arabidopsis thaliana seed imbibition 2) F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:unknown;C:cellular_component unknown;PFBAO O.I. C.G. H.G.
23.9 99.6 117.0 At3g59060 825075 PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6) Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B. O.I. C.G. H.G.
23.7 99.6 60.5 At3g06080 819781 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
22.9 99.6 134.6 At2g30600 817610 BTB/POZ domain-containing protein F:protein binding;P:cell adhesion;C:cellular_component unknown;MPOVF O.I. C.G. H.G.
22.4 99.6 20.3 At4g12690 826881 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
21.4 99.6 363.8 At3g30775 822833 ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5) Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element. O.I. C.G. H.G.
21.1 99.6 184.0 At1g12240 837777 ATBETAFRUCT4 F:hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole, plant-type cell wall;BPFOMA O.I. C.G. H.G.
20.7 99.6 141.9 At4g34030 829549 MCCB (3-METHYLCROTONYL-COA CARBOXYLASE) MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. O.I. C.G. H.G.
20.6 99.6 142.7 At4g19160 827654 unknown protein F:unknown;P:biological_process unknown;C:unknown;BPOM O.I. C.G. H.G.
20.4 99.6 546.1 At4g35770 829730 SEN1 (SENESCENCE 1) Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant. O.I. C.G. H.G.
20.3 99.6 32.1 At5g22390 832300 unknown protein F:unknown;P:unknown;C:unknown;PMOF O.I. C.G. H.G.
20.0 99.6 243.7 At2g39570 818542 ACT domain-containing protein F:amino acid binding;P:metabolic process;C:unknown;POB O.I. C.G. H.G.
19.2 99.6 132.9 At5g06980 830589 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
19.1 99.6 104.1 At1g07040 837215 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;BOP O.I. C.G. H.G.
19.0 99.5 153.4 At2g25900 817131 ATCTH putative Cys3His zinc finger protein (ATCTH) mRNA, complete O.I. C.G. H.G.
19.0 99.5 56.7 At3g21870 821742 CYCP2 F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPB O.I. C.G. H.G.
19.0 99.5 39.1 At1g68020 843130 ATTPS6 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme. O.I. C.G. H.G.
18.6 99.5 40.5 At4g34138 829561 UGT73B1 (UDP-glucosyl transferase 73B1) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
18.2 99.5 229.3 At2g14170 815903 ALDH6B2 Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase O.I. C.G. H.G.
18.1 99.5 173.9 At2g31810 817738 acetolactate synthase small subunit, putative F:acetolactate synthase activity, amino acid binding;P:branched chain family amino acid biosynthetic process;C:chloroplast;OBFAP O.I. C.G. H.G.
18.1 99.5 82.1 At4g39660 830120 AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA, O.I. C.G. H.G.
18.1 99.5 53.5 At4g01330 828117 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
17.7 99.5 64.4 At2g40420 818635 amino acid transporter family protein Encodes a putative amino acid transporter. O.I. C.G. H.G.
17.5 99.5 45.9 At3g02340 821090 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVAB O.I. C.G. H.G.
17.2 99.5 243.6 At3g48360 823994 BT2 (BTB AND TAZ DOMAIN PROTEIN 2) encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. O.I. C.G. H.G.
16.6 99.5 228.5 At1g12780 837834 UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1) Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress. O.I. C.G. H.G.
16.3 99.5 103.7 At1g64660 842774 ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE) Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis. O.I. C.G. H.G.
16.3 99.5 49.4 At5g64240 836545 AtMC3 (metacaspase 3) F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;BFOPA O.I. C.G. H.G.
16.2 99.5 89.7 At3g52840 824450 BGAL2 (beta-galactosidase 2) F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:apoplast;PBMFOA O.I. C.G. H.G.
16.2 99.5 28.9 At1g68190 843148 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM O.I. C.G. H.G.
16.1 99.5 48.3 At1g18620 838443 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBV O.I. C.G. H.G.
16.0 99.5 44.0 At4g16780 827384 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2) Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. O.I. C.G. H.G.
15.4 99.5 48.9 At5g17300 831595 myb family transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;PMOFVB O.I. C.G. H.G.
15.3 99.4 273.7 At5g56870 835789 BGAL4 (beta-galactosidase 4) F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA O.I. C.G. H.G.
15.2 99.4 267.4 At5g19120 832032 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PF O.I. C.G. H.G.
14.7 99.4 344.0 At5g49360 834996 BXL1 (BETA-XYLOSIDASE 1) Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members. O.I. C.G. H.G.
14.2 99.4 101.0 At4g38470 830003 protein kinase family protein F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation, metabolic process;C:cytosol;MPOBFVA O.I. C.G. H.G.
14.1 99.4 50.4 At2g17880 816298 DNAJ heat shock protein, putative F:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAV O.I. C.G. H.G.
14.0 99.4 125.0 At5g57655 835871 xylose isomerase family protein F:xylose isomerase activity;P:carbohydrate metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPMF O.I. C.G. H.G.
13.9 99.4 61.1 At1g55510 841998 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT) branched-chain alpha-keto acid decarboxylase E1 beta O.I. C.G. H.G.
13.4 99.4 51.7 At5g18140 831932 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV O.I. C.G. H.G.
13.3 99.4 164.9 At2g18700 816385 ATTPS11 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. O.I. C.G. H.G.
13.3 99.4 54.3 At1g35670 840471 ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2) Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. O.I. C.G. H.G.
13.2 99.4 60.3 At3g17100 820967 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PM O.I. C.G. H.G.
13.1 99.4 126.5 At1g09570 837483 PHYA (PHYTOCHROME A) Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation. O.I. C.G. H.G.
12.9 99.3 76.7 At2g22980 816829 serine-type carboxypeptidase F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
12.9 99.3 35.6 At1g15180 838084 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
12.8 99.3 50.1 At1g33050 840200 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFP O.I. C.G. H.G.
12.7 99.3 47.0 At5g04040 830283 SDP1 (SUGAR-DEPENDENT1) Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type. O.I. C.G. H.G.
12.7 99.3 26.9 At4g18740 827608 transcription termination factor F:transcription termination factor activity;P:transcription termination;C:unknown;MPOBVF O.I. C.G. H.G.
12.5 99.3 34.1 At5g02150 831805 binding F:binding;P:unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
12.4 99.3 201.4 At5g57660 835872 zinc finger (B-box type) family protein F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;PO O.I. C.G. H.G.
12.4 99.3 66.9 At1g42550 840860 PMI1 (PLASTID MOVEMENT IMPAIRED1) Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms. O.I. C.G. H.G.
12.4 99.3 56.6 At1g77210 844057 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BFMPOA O.I. C.G. H.G.
12.3 99.3 187.3 At1g80440 844383 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFA O.I. C.G. H.G.
12.3 99.3 51.1 At2g35800 818153 mitochondrial substrate carrier family protein F:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, chloroplast envelope;MFPO O.I. C.G. H.G.
12.3 99.3 36.8 At2g43330 818934 INT1 (INOSITOL TRANSPORTER 1) Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium. O.I. C.G. H.G.
12.1 99.3 316.5 At1g62480 842545 vacuolar calcium-binding protein-related F:unknown;P:response to cadmium ion, response to salt stress;C:cellular_component unknown;OMBFPVA O.I. C.G. H.G.
12.1 99.3 59.9 At5g41080 834110 glycerophosphoryl diester phosphodiesterase family protein F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
12.0 99.3 65.4 At4g19530 827695 disease resistance protein (TIR-NBS-LRR class), putative Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death. O.I. C.G. H.G.
11.9 99.3 139.3 At3g61060 825278 AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13) F:carbohydrate binding;P:N-terminal protein myristoylation, response to wounding;C:unknown;P O.I. C.G. H.G.
11.8 99.3 68.7 At2g42580 818858 TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3) Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. O.I. C.G. H.G.
11.7 99.3 137.1 At1g53580 841793 GLY3 (GLYOXALASE II 3) F:hydrolase activity, hydroxyacylglutathione hydrolase activity;P:response to salt stress, methylglyoxal catabolic process to D-lactate;C:unknown;BOMAFP O.I. C.G. H.G.
11.7 99.3 29.3 At1g28260 839720 - F:unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
11.5 99.3 48.0 At2g38820 818464 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
11.5 99.3 11.4 At2g29680 817518 CDC6 (CELL DIVISION CONTROL 6) Encodes cell division control protein 6 (CDC6). O.I. C.G. H.G.
11.4 99.3 22.7 At2g42870 818887 PAR1 (PHY RAPIDLY REGULATED 1) Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510). O.I. C.G. H.G.
11.3 99.3 270.0 At5g22920 832356 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBA O.I. C.G. H.G.
11.3 99.3 73.9 At4g28260 828941 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
11.3 99.3 55.2 At1g55810 842031 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative F:uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding;P:biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
11.3 99.3 52.6 At5g16650 831527 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
240.4	100.0	98.6	At3g62950	825470	glutaredoxin family protein	F:electron carrier activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMBFO	O.I.	C.G.	H.G.
74.5	99.9	283.7	At1g03090	838362	MCCA	MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.	O.I.	C.G.	H.G.
65.6	99.8	78.3	At2g43400	818941	ETFQO (electron-transfer flavoprotein:ubiquinone oxidoreductase)	Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.	O.I.	C.G.	H.G.
52.9	99.8	33.7	At4g15690	827246	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
45.0	99.8	87.0	At1g76410	843974	ATL8	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV	O.I.	C.G.	H.G.
44.8	99.8	288.5	At2g29670	817517	binding	F:binding;P:unknown;C:chloroplast;PBOAM	O.I.	C.G.	H.G.
44.7	99.8	71.7	At1g79700	844309	ovule development protein, putative	F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POB	O.I.	C.G.	H.G.
43.0	99.8	148.7	At3g13450	820547	DIN4 (DARK INDUCIBLE 4)	branched chain alpha-keto acid dehydrogenase E1 beta	O.I.	C.G.	H.G.
41.9	99.8	103.5	At1g21400	838739	2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative	F:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
38.6	99.8	203.2	At1g10070	837543	ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2)	Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.	O.I.	C.G.	H.G.
38.3	99.8	217.6	At1g06570	837168	PDS1 (PHYTOENE DESATURATION 1)	Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.	O.I.	C.G.	H.G.
37.5	99.7	153.8	At1g72060	843537	serine-type endopeptidase inhibitor	F:serine-type endopeptidase inhibitor activity;P:response to oxidative stress;C:endomembrane system;P	O.I.	C.G.	H.G.
36.1	99.7	428.4	At3g47340	823888	ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)	encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.	O.I.	C.G.	H.G.
34.8	99.7	209.2	At5g54080	835494	HGO (HOMOGENTISATE 1,2-DIOXYGENASE)	homogentisate 1,2-dioxygenase	O.I.	C.G.	H.G.
32.6	99.7	77.0	At1g54740	841915	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBF	O.I.	C.G.	H.G.
31.7	99.7	189.4	At5g21170	832243	5'-AMP-activated protein kinase beta-2 subunit, putative	F:AMP-activated protein kinase activity;P:N-terminal protein myristoylation;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
30.7	99.7	140.1	At3g45300	823668	IVD (ISOVALERYL-COA-DEHYDROGENASE)	Encodes isovaleryl-coenzyme a dehydrogenase.	O.I.	C.G.	H.G.
29.5	99.7	111.0	At5g53970	835480	aminotransferase, putative	encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment	O.I.	C.G.	H.G.
29.2	99.7	134.7	At5g16340	831495	AMP-binding protein, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
29.0	99.7	23.5	At4g15700	827247	glutaredoxin family protein	F:electron carrier activity, arsenate reductase (glutaredoxin) activity, protein disulfide oxidoreductase activity;P:cell redox homeostasis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
28.4	99.7	138.3	At5g18170	831935	GDH1 (GLUTAMATE DEHYDROGENASE 1)	Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.	O.I.	C.G.	H.G.
28.2	99.7	372.6	At3g13750	820584	BGAL1 (Beta galactosidase 1)	beta-galactosidase, glycosyl hydrolase family 35	O.I.	C.G.	H.G.
27.8	99.7	38.0	At5g55700	835664	BAM4 (BETA-AMYLASE 4)	In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role.	O.I.	C.G.	H.G.
27.3	99.7	159.0	At3g06850	819869	BCE2	dihydrolipoamide branched chain acyltransferase	O.I.	C.G.	H.G.
26.7	99.7	52.4	At3g61210	825293	embryo-abundant protein-related	F:unknown;P:unknown;C:cellular_component unknown;BPFOMA	O.I.	C.G.	H.G.
26.1	99.7	111.1	At1g03610	838961	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
25.8	99.7	140.8	At1g58180	842185	carbonic anhydrase family protein / carbonate dehydratase family protein	F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:mitochondrion;BOPFMA	O.I.	C.G.	H.G.
25.6	99.7	104.8	At4g03510	825654	RMA1	RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway.	O.I.	C.G.	H.G.
24.4	99.6	110.1	At4g36730	829826	GBF1	member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box	O.I.	C.G.	H.G.
24.2	99.6	322.6	At3g57520	824919	AtSIP2 (Arabidopsis thaliana seed imbibition 2)	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:unknown;C:cellular_component unknown;PFBAO	O.I.	C.G.	H.G.
23.9	99.6	117.0	At3g59060	825075	PIL6 (PHYTOCHROME INTERACTING FACTOR 3-LIKE 6)	Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B.	O.I.	C.G.	H.G.
23.7	99.6	60.5	At3g06080	819781	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
22.9	99.6	134.6	At2g30600	817610	BTB/POZ domain-containing protein	F:protein binding;P:cell adhesion;C:cellular_component unknown;MPOVF	O.I.	C.G.	H.G.
22.4	99.6	20.3	At4g12690	826881	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
21.4	99.6	363.8	At3g30775	822833	ERD5 (EARLY RESPONSIVE TO DEHYDRATION 5)	Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.	O.I.	C.G.	H.G.
21.1	99.6	184.0	At1g12240	837777	ATBETAFRUCT4	F:hydrolase activity, hydrolyzing O-glycosyl compounds, beta-fructofuranosidase activity;P:sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process;C:vacuole, plant-type cell wall;BPFOMA	O.I.	C.G.	H.G.
20.7	99.6	141.9	At4g34030	829549	MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)	MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.	O.I.	C.G.	H.G.
20.6	99.6	142.7	At4g19160	827654	unknown protein	F:unknown;P:biological_process unknown;C:unknown;BPOM	O.I.	C.G.	H.G.
20.4	99.6	546.1	At4g35770	829730	SEN1 (SENESCENCE 1)	Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.	O.I.	C.G.	H.G.
20.3	99.6	32.1	At5g22390	832300	unknown protein	F:unknown;P:unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
20.0	99.6	243.7	At2g39570	818542	ACT domain-containing protein	F:amino acid binding;P:metabolic process;C:unknown;POB	O.I.	C.G.	H.G.
19.2	99.6	132.9	At5g06980	830589	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
19.1	99.6	104.1	At1g07040	837215	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;BOP	O.I.	C.G.	H.G.
19.0	99.5	153.4	At2g25900	817131	ATCTH	putative Cys3His zinc finger protein (ATCTH) mRNA, complete	O.I.	C.G.	H.G.
19.0	99.5	56.7	At3g21870	821742	CYCP2	F:cyclin-dependent protein kinase activity;P:regulation of cell cycle;C:unknown;FOMPB	O.I.	C.G.	H.G.
19.0	99.5	39.1	At1g68020	843130	ATTPS6	Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.	O.I.	C.G.	H.G.
18.6	99.5	40.5	At4g34138	829561	UGT73B1 (UDP-glucosyl transferase 73B1)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, abscisic acid glucosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
18.2	99.5	229.3	At2g14170	815903	ALDH6B2	Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase	O.I.	C.G.	H.G.
18.1	99.5	173.9	At2g31810	817738	acetolactate synthase small subunit, putative	F:acetolactate synthase activity, amino acid binding;P:branched chain family amino acid biosynthetic process;C:chloroplast;OBFAP	O.I.	C.G.	H.G.
18.1	99.5	82.1	At4g39660	830120	AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)	alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,	O.I.	C.G.	H.G.
18.1	99.5	53.5	At4g01330	828117	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
17.7	99.5	64.4	At2g40420	818635	amino acid transporter family protein	Encodes a putative amino acid transporter.	O.I.	C.G.	H.G.
17.5	99.5	45.9	At3g02340	821090	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVAB	O.I.	C.G.	H.G.
17.2	99.5	243.6	At3g48360	823994	BT2 (BTB AND TAZ DOMAIN PROTEIN 2)	encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development.	O.I.	C.G.	H.G.
16.6	99.5	228.5	At1g12780	837834	UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1)	Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.	O.I.	C.G.	H.G.
16.3	99.5	103.7	At1g64660	842774	ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)	Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.	O.I.	C.G.	H.G.
16.3	99.5	49.4	At5g64240	836545	AtMC3 (metacaspase 3)	F:cysteine-type endopeptidase activity;P:proteolysis;C:unknown;BFOPA	O.I.	C.G.	H.G.
16.2	99.5	89.7	At3g52840	824450	BGAL2 (beta-galactosidase 2)	F:cation binding, beta-galactosidase activity, catalytic activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:apoplast;PBMFOA	O.I.	C.G.	H.G.
16.2	99.5	28.9	At1g68190	843148	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:endomembrane system, intracellular;POM	O.I.	C.G.	H.G.
16.1	99.5	48.3	At1g18620	838443	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBV	O.I.	C.G.	H.G.
16.0	99.5	44.0	At4g16780	827384	ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2)	Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.	O.I.	C.G.	H.G.
15.4	99.5	48.9	At5g17300	831595	myb family transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;PMOFVB	O.I.	C.G.	H.G.
15.3	99.4	273.7	At5g56870	835789	BGAL4 (beta-galactosidase 4)	F:beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;PBMFOA	O.I.	C.G.	H.G.
15.2	99.4	267.4	At5g19120	832032	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PF	O.I.	C.G.	H.G.
14.7	99.4	344.0	At5g49360	834996	BXL1 (BETA-XYLOSIDASE 1)	Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.	O.I.	C.G.	H.G.
14.2	99.4	101.0	At4g38470	830003	protein kinase family protein	F:protein serine/threonine/tyrosine kinase activity, protein kinase activity;P:protein amino acid phosphorylation, metabolic process;C:cytosol;MPOBFVA	O.I.	C.G.	H.G.
14.1	99.4	50.4	At2g17880	816298	DNAJ heat shock protein, putative	F:heat shock protein binding;P:protein folding;C:chloroplast;BOMFPAV	O.I.	C.G.	H.G.
14.0	99.4	125.0	At5g57655	835871	xylose isomerase family protein	F:xylose isomerase activity;P:carbohydrate metabolic process;C:endoplasmic reticulum, plasma membrane, vacuole;BOPMF	O.I.	C.G.	H.G.
13.9	99.4	61.1	At1g55510	841998	BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT)	branched-chain alpha-keto acid decarboxylase E1 beta	O.I.	C.G.	H.G.
13.4	99.4	51.7	At5g18140	831932	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
13.3	99.4	164.9	At2g18700	816385	ATTPS11	Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.	O.I.	C.G.	H.G.
13.3	99.4	54.3	At1g35670	840471	ATCDPK2 (CALCIUM-DEPENDENT PROTEIN KINASE 2)	Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.	O.I.	C.G.	H.G.
13.2	99.4	60.3	At3g17100	820967	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus, chloroplast;PM	O.I.	C.G.	H.G.
13.1	99.4	126.5	At1g09570	837483	PHYA (PHYTOCHROME A)	Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.	O.I.	C.G.	H.G.
12.9	99.3	76.7	At2g22980	816829	serine-type carboxypeptidase	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
12.9	99.3	35.6	At1g15180	838084	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
12.8	99.3	50.1	At1g33050	840200	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMFP	O.I.	C.G.	H.G.
12.7	99.3	47.0	At5g04040	830283	SDP1 (SUGAR-DEPENDENT1)	Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.	O.I.	C.G.	H.G.
12.7	99.3	26.9	At4g18740	827608	transcription termination factor	F:transcription termination factor activity;P:transcription termination;C:unknown;MPOBVF	O.I.	C.G.	H.G.
12.5	99.3	34.1	At5g02150	831805	binding	F:binding;P:unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
12.4	99.3	201.4	At5g57660	835872	zinc finger (B-box type) family protein	F:transcription factor activity, zinc ion binding;P:regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.
12.4	99.3	66.9	At1g42550	840860	PMI1 (PLASTID MOVEMENT IMPAIRED1)	Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms.	O.I.	C.G.	H.G.
12.4	99.3	56.6	At1g77210	844057	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BFMPOA	O.I.	C.G.	H.G.
12.3	99.3	187.3	At1g80440	844383	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFA	O.I.	C.G.	H.G.
12.3	99.3	51.1	At2g35800	818153	mitochondrial substrate carrier family protein	F:binding, calcium ion binding;P:transport;C:mitochondrial inner membrane, chloroplast envelope;MFPO	O.I.	C.G.	H.G.
12.3	99.3	36.8	At2g43330	818934	INT1 (INOSITOL TRANSPORTER 1)	Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium.	O.I.	C.G.	H.G.
12.1	99.3	316.5	At1g62480	842545	vacuolar calcium-binding protein-related	F:unknown;P:response to cadmium ion, response to salt stress;C:cellular_component unknown;OMBFPVA	O.I.	C.G.	H.G.
12.1	99.3	59.9	At5g41080	834110	glycerophosphoryl diester phosphodiesterase family protein	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
12.0	99.3	65.4	At4g19530	827695	disease resistance protein (TIR-NBS-LRR class), putative	Encodes a TIR-NB-LRR resistance protein. Transient expression in tobacco induces cell death.	O.I.	C.G.	H.G.
11.9	99.3	139.3	At3g61060	825278	AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)	F:carbohydrate binding;P:N-terminal protein myristoylation, response to wounding;C:unknown;P	O.I.	C.G.	H.G.
11.8	99.3	68.7	At2g42580	818858	TTL3 (TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3)	Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling.	O.I.	C.G.	H.G.
11.7	99.3	137.1	At1g53580	841793	GLY3 (GLYOXALASE II 3)	F:hydrolase activity, hydroxyacylglutathione hydrolase activity;P:response to salt stress, methylglyoxal catabolic process to D-lactate;C:unknown;BOMAFP	O.I.	C.G.	H.G.
11.7	99.3	29.3	At1g28260	839720	-	F:unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
11.5	99.3	48.0	At2g38820	818464	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
11.5	99.3	11.4	At2g29680	817518	CDC6 (CELL DIVISION CONTROL 6)	Encodes cell division control protein 6 (CDC6).	O.I.	C.G.	H.G.
11.4	99.3	22.7	At2g42870	818887	PAR1 (PHY RAPIDLY REGULATED 1)	Encodes PHYTOCHROME RAPIDLY REGULATED1 (PAR1), an atypical basic helix-loop-helix (bHLP) protein. Closely related to PAR2 (At3g58850). Up regulated after simulated shade perception. Acts in the nucleus to control plant development and as a negative regulator of shade avoidance response. Functions as transcriptional repressor of auxin-responsive genes SAUR15 (AT4G38850) and SAUR68 (AT1G29510).	O.I.	C.G.	H.G.
11.3	99.3	270.0	At5g22920	832356	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFBA	O.I.	C.G.	H.G.
11.3	99.3	73.9	At4g28260	828941	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.3	99.3	55.2	At1g55810	842031	uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative	F:uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding;P:biosynthetic process, metabolic process;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
11.3	99.3	52.6	At5g16650	831527	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.

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GSM ID	GSM253160
Assay name	6h into an extended night
GSE experiment	GSE10016: Expression data of Arabidopsis thaliana rosettes in an extended night

Microarray experiments to specifically-expressed genes

GSM ID GSM253160 Assay name 6h into an extended night GSE experiment GSE10016: Expression data of Arabidopsis thaliana rosettes in an extended night

GSM ID GSM253160

Assay name 6h into an extended night

GSE experiment GSE10016: Expression data of Arabidopsis thaliana rosettes in an extended night