CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM252691

Assay name Section of Root from 270 mm to 340 mm harvested immediately rep2

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
207.5 100.0 60.7 At5g62330 836354 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
152.3 99.9 136.2 At1g54890 841928 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
108.6 99.9 70.4 At4g28650 828983 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
93.2 99.9 369.2 At2g33790 817946 AGP30 (ARABINOGALACTAN PROTEIN30) pollen Ole e 1 allergen protein containing 14.6% proline residues, similar to arabinogalactan protein (Daucus carota) GI:11322245, SP:Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family O.I. C.G. H.G.
83.9 99.9 32.5 At5g15150 831367 ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem. O.I. C.G. H.G.
76.5 99.9 85.8 At3g54770 824642 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
75.7 99.9 79.3 At5g48110 834863 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO O.I. C.G. H.G.
70.6 99.9 297.1 At3g54960 824661 ATPDIL1-3 (PDI-LIKE 1-3) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. O.I. C.G. H.G.
64.1 99.8 229.8 At5g62340 836355 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
63.1 99.8 155.2 At4g17460 827457 HAT1 Encodes homeobox protein HAT1. O.I. C.G. H.G.
56.1 99.8 52.3 At3g23470 821928 cyclopropane-fatty-acyl-phospholipid synthase F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM O.I. C.G. H.G.
54.1 99.8 51.5 At5g19340 832054 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBV O.I. C.G. H.G.
52.6 99.8 43.8 At3g01220 821232 ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity. O.I. C.G. H.G.
45.8 99.8 30.0 At5g10720 830938 AHK5 (ARABIDOPSIS HISTIDINE KINASE 5) member of Histidine Kinase O.I. C.G. H.G.
40.8 99.8 114.7 At4g03190 828045 GRH1 (GRR1-LIKE PROTEIN 1) Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression. O.I. C.G. H.G.
37.5 99.7 19.8 At3g20110 821554 CYP705A20 member of CYP705A O.I. C.G. H.G.
37.4 99.7 171.2 At2g18980 816415 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
36.4 99.7 45.2 At1g05650 837072 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
35.8 99.7 149.4 At2g34560 818020 katanin, putative F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:unknown;OBMFPAV O.I. C.G. H.G.
35.5 99.7 27.8 At3g62280 825401 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
34.2 99.7 14.3 At3g59850 825155 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
34.1 99.7 38.9 At5g51500 835224 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
33.9 99.7 40.3 At3g50640 824227 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
33.8 99.7 22.9 At2g26360 817176 binding F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
32.0 99.7 126.3 At5g56360 835736 calmodulin-binding protein F:calmodulin binding;P:unknown;C:endomembrane system;MOBFPVA O.I. C.G. H.G.
30.8 99.7 20.9 At5g43030 834318 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO O.I. C.G. H.G.
28.9 99.7 335.4 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
27.4 99.7 72.8 At1g62810 842580 copper amine oxidase, putative F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
27.1 99.7 21.3 At1g52250 - - O.I. C.G. H.G.
26.6 99.7 72.5 At3g52940 824460 FK (FACKEL) Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo. O.I. C.G. H.G.
26.0 99.7 39.4 At1g31950 840085 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO O.I. C.G. H.G.
25.9 99.7 54.3 At1g17430 838315 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOPMAF O.I. C.G. H.G.
24.4 99.6 36.3 At2g41810 818780 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB O.I. C.G. H.G.
23.6 99.6 27.2 At5g25830 832652 zinc finger (GATA type) family protein F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM O.I. C.G. H.G.
23.2 99.6 13.5 At2g34180 817979 CIPK13 (CBL-INTERACTING PROTEIN KINASE 13) Encodes CBL-interacting protein kinase 13 (CIPK13). O.I. C.G. H.G.
23.1 99.6 73.9 At5g56040 835702 leucine-rich repeat protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
23.0 99.6 92.5 At4g39660 830120 AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2) alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA, O.I. C.G. H.G.
22.9 99.6 39.6 At5g52280 835304 protein transport protein-related F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPAV O.I. C.G. H.G.
22.8 99.6 26.9 At1g68150 843143 WRKY9 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
22.8 99.6 19.0 At3g63470 825522 scpl40 (serine carboxypeptidase-like 40) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB O.I. C.G. H.G.
22.6 99.6 134.4 At5g39320 833928 UDP-glucose 6-dehydrogenase, putative F:in 6 functions;P:metabolic process;C:cytosol, nucleus;OBAMPFV O.I. C.G. H.G.
22.5 99.6 67.9 At5g57090 835813 EIR1 (ETHYLENE INSENSITIVE ROOT 1) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity. O.I. C.G. H.G.
21.6 99.6 107.2 At3g17780 821046 unknown protein F:molecular_function unknown;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
21.5 99.6 29.7 At4g36790 829832 transporter-related F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:biological_process unknown;C:membrane;BOMFAPV O.I. C.G. H.G.
21.5 99.6 23.7 At5g14020 831250 - F:unknown;P:N-terminal protein myristoylation;C:vacuole;P O.I. C.G. H.G.
21.3 99.6 28.6 At1g69600 843296 ZFHD1 (ZINC FINGER HOMEODOMAIN 1) Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid. O.I. C.G. H.G.
21.1 99.6 368.7 At1g66270 842944 BGLU21 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA O.I. C.G. H.G.
20.9 99.6 12.9 At5g17960 831663 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
20.7 99.6 13.7 At3g46720 823825 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
20.5 99.6 110.2 At1g75780 843911 TUB1 beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses O.I. C.G. H.G.
20.3 99.6 134.7 At3g09300 820086 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B) F:oxysterol binding;P:steroid metabolic process;C:unknown;MFOP O.I. C.G. H.G.
20.0 99.6 100.9 At2g48020 819414 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, chloroplast, vacuole, membrane;BMFPOAV O.I. C.G. H.G.
19.9 99.6 7.3 At1g60790 842373 unknown protein F:unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
19.8 99.6 184.8 At4g31340 829261 myosin heavy chain-related F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPAV O.I. C.G. H.G.
19.8 99.6 72.8 At3g18000 821324 XPL1 (XIPOTL 1) Arabidopsis thaliana N-methyltransferase-like protein mRNA. O.I. C.G. H.G.
19.6 99.6 54.6 At4g17190 827430 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers. O.I. C.G. H.G.
19.3 99.6 29.0 At1g12160 837768 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
19.1 99.6 47.6 At3g01780 821081 TPLATE Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position. O.I. C.G. H.G.
18.7 99.5 12.2 At3g10660 820235 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2) predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. O.I. C.G. H.G.
18.6 99.5 68.1 At4g29680 829089 type I phosphodiesterase/nucleotide pyrophosphatase family protein F:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:vacuole;MBOFPAV O.I. C.G. H.G.
18.6 99.5 18.4 At1g27140 839603 ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
18.5 99.5 15.6 At1g73160 843647 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPM O.I. C.G. H.G.
18.0 99.5 35.3 At1g51540 841579 - F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOPVFA O.I. C.G. H.G.
18.0 99.5 14.2 At3g24210 822007 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
17.8 99.5 38.7 At4g25360 828639 - F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
17.7 99.5 61.6 At1g71220 843462 EBS1 (EMS-mutagenized bri1 suppressor 1) F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity;P:carbohydrate biosynthetic process, protein amino acid glycosylation;C:endoplasmic reticulum;MFOBP O.I. C.G. H.G.
17.7 99.5 21.5 At5g14150 831265 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PBO O.I. C.G. H.G.
17.5 99.5 211.4 At5g60640 836185 ATPDIL1-4 (PDI-LIKE 1-4) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants. O.I. C.G. H.G.
17.3 99.5 102.1 At5g12940 831134 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA O.I. C.G. H.G.
17.3 99.5 58.2 At5g19930 832115 integral membrane family protein F:unknown;P:unknown;C:endomembrane system;OBMAFP O.I. C.G. H.G.
17.1 99.5 27.6 At1g10120 837549 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB O.I. C.G. H.G.
16.9 99.5 213.8 At2g35120 818078 glycine cleavage system H protein, mitochondrial, putative F:glycine dehydrogenase (decarboxylating) activity, ATP binding;P:glycine catabolic process;C:mitochondrion, glycine cleavage complex;BOPMFA O.I. C.G. H.G.
16.9 99.5 34.0 At2g02780 814807 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
16.7 99.5 36.5 At3g16200 820866 unknown protein F:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;OPB O.I. C.G. H.G.
16.6 99.5 14.4 At1g64920 842800 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO O.I. C.G. H.G.
16.5 99.5 126.4 At3g17940 820642 aldose 1-epimerase family protein F:isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
16.2 99.5 401.8 At2g22170 816751 lipid-associated family protein F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast, membrane;PMO O.I. C.G. H.G.
16.0 99.5 69.0 At5g41080 834110 glycerophosphoryl diester phosphodiesterase family protein F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
15.9 99.5 27.3 At5g01620 831716 unknown protein F:unknown;P:unknown;C:endomembrane system;PM O.I. C.G. H.G.
15.8 99.5 205.2 At1g04430 839522 dehydration-responsive protein-related F:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane;PBO O.I. C.G. H.G.
15.8 99.5 106.7 At1g47625 3767388 - pseudogene of seven transmembrane domain protein O.I. C.G. H.G.
15.7 99.5 96.2 At5g26740 832714 unknown protein F:unknown;P:unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
15.7 99.5 36.8 At1g76260 843959 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFPOB O.I. C.G. H.G.
15.4 99.5 43.4 At1g18640 838445 - - O.I. C.G. H.G.
15.4 99.5 14.2 At1g50520 841474 CYP705A27 member of CYP705A O.I. C.G. H.G.
15.2 99.4 117.7 At1g76090 843941 SMT3 (STEROL METHYLTRANSFERASE 3) Encodes S-adenosyl-methionine-sterol-C-methyltransferase, an enzyme in the sterol biosynthetic pathway. O.I. C.G. H.G.
15.0 99.4 106.5 At1g67330 843054 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB O.I. C.G. H.G.
15.0 99.4 64.2 At4g22930 828392 PYR4 (PYRIMIDIN 4) Encodes dihydroorotase (PYR4). O.I. C.G. H.G.
15.0 99.4 12.9 At1g50580 841480 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOF O.I. C.G. H.G.
14.9 99.4 217.4 At3g02780 820960 IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. O.I. C.G. H.G.
14.9 99.4 56.8 At1g69030 843235 - F:unknown;P:biological_process unknown;C:unknown;PMOFAB O.I. C.G. H.G.
14.9 99.4 53.3 At4g29520 829073 - F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;OMPFA O.I. C.G. H.G.
14.8 99.4 75.0 At5g60950 836216 COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR) F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
14.7 99.4 164.8 At1g20950 838689 pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related F:diphosphate-fructose-6-phosphate 1-phosphotransferase activity;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus;C:pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex;BOPAM O.I. C.G. H.G.
14.6 99.4 68.3 At5g27920 832858 F-box family protein F:ubiquitin-protein ligase activity;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. C.G. H.G.
14.5 99.4 3.7 At2g22710 816801 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
14.3 99.4 69.1 At3g44320 823557 NIT3 (NITRILASE 3) This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways. O.I. C.G. H.G.
14.2 99.4 22.8 At2g29710 817521 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
14.1 99.4 126.4 At2g42570 818857 unknown protein F:unknown;P:biological_process unknown;C:vacuole;P O.I. C.G. H.G.
14.1 99.4 67.4 At1g48160 841235 signal recognition particle 19 kDa protein, putative / SRP19, putative F:7S RNA binding;P:protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;MFAOP O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
207.5	100.0	60.7	At5g62330	836354	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
152.3	99.9	136.2	At1g54890	841928	late embryogenesis abundant protein-related / LEA protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
108.6	99.9	70.4	At4g28650	828983	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
93.2	99.9	369.2	At2g33790	817946	AGP30 (ARABINOGALACTAN PROTEIN30)	pollen Ole e 1 allergen protein containing 14.6% proline residues, similar to arabinogalactan protein (Daucus carota) GI:11322245, SP:Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family	O.I.	C.G.	H.G.
83.9	99.9	32.5	At5g15150	831367	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.	O.I.	C.G.	H.G.
76.5	99.9	85.8	At3g54770	824642	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
75.7	99.9	79.3	At5g48110	834863	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO	O.I.	C.G.	H.G.
70.6	99.9	297.1	At3g54960	824661	ATPDIL1-3 (PDI-LIKE 1-3)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.	O.I.	C.G.	H.G.
64.1	99.8	229.8	At5g62340	836355	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
63.1	99.8	155.2	At4g17460	827457	HAT1	Encodes homeobox protein HAT1.	O.I.	C.G.	H.G.
56.1	99.8	52.3	At3g23470	821928	cyclopropane-fatty-acyl-phospholipid synthase	F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM	O.I.	C.G.	H.G.
54.1	99.8	51.5	At5g19340	832054	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OPMFBV	O.I.	C.G.	H.G.
52.6	99.8	43.8	At3g01220	821232	ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity.	O.I.	C.G.	H.G.
45.8	99.8	30.0	At5g10720	830938	AHK5 (ARABIDOPSIS HISTIDINE KINASE 5)	member of Histidine Kinase	O.I.	C.G.	H.G.
40.8	99.8	114.7	At4g03190	828045	GRH1 (GRR1-LIKE PROTEIN 1)	Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.	O.I.	C.G.	H.G.
37.5	99.7	19.8	At3g20110	821554	CYP705A20	member of CYP705A	O.I.	C.G.	H.G.
37.4	99.7	171.2	At2g18980	816415	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
36.4	99.7	45.2	At1g05650	837072	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
35.8	99.7	149.4	At2g34560	818020	katanin, putative	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:protein metabolic process;C:unknown;OBMFPAV	O.I.	C.G.	H.G.
35.5	99.7	27.8	At3g62280	825401	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
34.2	99.7	14.3	At3g59850	825155	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
34.1	99.7	38.9	At5g51500	835224	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
33.9	99.7	40.3	At3g50640	824227	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
33.8	99.7	22.9	At2g26360	817176	binding	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
32.0	99.7	126.3	At5g56360	835736	calmodulin-binding protein	F:calmodulin binding;P:unknown;C:endomembrane system;MOBFPVA	O.I.	C.G.	H.G.
30.8	99.7	20.9	At5g43030	834318	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
28.9	99.7	335.4	At4g30170	829140	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
27.4	99.7	72.8	At1g62810	842580	copper amine oxidase, putative	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
27.1	99.7	21.3	At1g52250		-	-	O.I.	C.G.	H.G.
26.6	99.7	72.5	At3g52940	824460	FK (FACKEL)	Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.	O.I.	C.G.	H.G.
26.0	99.7	39.4	At1g31950	840085	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO	O.I.	C.G.	H.G.
25.9	99.7	54.3	At1g17430	838315	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:biological_process unknown;C:endomembrane system;BOPMAF	O.I.	C.G.	H.G.
24.4	99.6	36.3	At2g41810	818780	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
23.6	99.6	27.2	At5g25830	832652	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	O.I.	C.G.	H.G.
23.2	99.6	13.5	At2g34180	817979	CIPK13 (CBL-INTERACTING PROTEIN KINASE 13)	Encodes CBL-interacting protein kinase 13 (CIPK13).	O.I.	C.G.	H.G.
23.1	99.6	73.9	At5g56040	835702	leucine-rich repeat protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
23.0	99.6	92.5	At4g39660	830120	AGT2 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 2)	alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,	O.I.	C.G.	H.G.
22.9	99.6	39.6	At5g52280	835304	protein transport protein-related	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPAV	O.I.	C.G.	H.G.
22.8	99.6	26.9	At1g68150	843143	WRKY9	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
22.8	99.6	19.0	At3g63470	825522	scpl40 (serine carboxypeptidase-like 40)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PFMOB	O.I.	C.G.	H.G.
22.6	99.6	134.4	At5g39320	833928	UDP-glucose 6-dehydrogenase, putative	F:in 6 functions;P:metabolic process;C:cytosol, nucleus;OBAMPFV	O.I.	C.G.	H.G.
22.5	99.6	67.9	At5g57090	835813	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.	O.I.	C.G.	H.G.
21.6	99.6	107.2	At3g17780	821046	unknown protein	F:molecular_function unknown;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
21.5	99.6	29.7	At4g36790	829832	transporter-related	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:biological_process unknown;C:membrane;BOMFAPV	O.I.	C.G.	H.G.
21.5	99.6	23.7	At5g14020	831250	-	F:unknown;P:N-terminal protein myristoylation;C:vacuole;P	O.I.	C.G.	H.G.
21.3	99.6	28.6	At1g69600	843296	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.	O.I.	C.G.	H.G.
21.1	99.6	368.7	At1g66270	842944	BGLU21	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA	O.I.	C.G.	H.G.
20.9	99.6	12.9	At5g17960	831663	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
20.7	99.6	13.7	At3g46720	823825	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
20.5	99.6	110.2	At1g75780	843911	TUB1	beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses	O.I.	C.G.	H.G.
20.3	99.6	134.7	At3g09300	820086	ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B)	F:oxysterol binding;P:steroid metabolic process;C:unknown;MFOP	O.I.	C.G.	H.G.
20.0	99.6	100.9	At2g48020	819414	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, chloroplast, vacuole, membrane;BMFPOAV	O.I.	C.G.	H.G.
19.9	99.6	7.3	At1g60790	842373	unknown protein	F:unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
19.8	99.6	184.8	At4g31340	829261	myosin heavy chain-related	F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPAV	O.I.	C.G.	H.G.
19.8	99.6	72.8	At3g18000	821324	XPL1 (XIPOTL 1)	Arabidopsis thaliana N-methyltransferase-like protein mRNA.	O.I.	C.G.	H.G.
19.6	99.6	54.6	At4g17190	827430	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)	Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.	O.I.	C.G.	H.G.
19.3	99.6	29.0	At1g12160	837768	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
19.1	99.6	47.6	At3g01780	821081	TPLATE	Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.	O.I.	C.G.	H.G.
18.7	99.5	12.2	At3g10660	820235	CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2)	predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.	O.I.	C.G.	H.G.
18.6	99.5	68.1	At4g29680	829089	type I phosphodiesterase/nucleotide pyrophosphatase family protein	F:hydrolase activity, catalytic activity;P:metabolic process, nucleotide metabolic process;C:vacuole;MBOFPAV	O.I.	C.G.	H.G.
18.6	99.5	18.4	At1g27140	839603	ATGSTU14 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 14)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
18.5	99.5	15.6	At1g73160	843647	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPM	O.I.	C.G.	H.G.
18.0	99.5	35.3	At1g51540	841579	-	F:unknown;P:biological_process unknown;C:Golgi apparatus;MBOPVFA	O.I.	C.G.	H.G.
18.0	99.5	14.2	At3g24210	822007	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
17.8	99.5	38.7	At4g25360	828639	-	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
17.7	99.5	61.6	At1g71220	843462	EBS1 (EMS-mutagenized bri1 suppressor 1)	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups, UDP-glucose:glycoprotein glucosyltransferase activity;P:carbohydrate biosynthetic process, protein amino acid glycosylation;C:endoplasmic reticulum;MFOBP	O.I.	C.G.	H.G.
17.7	99.5	21.5	At5g14150	831265	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PBO	O.I.	C.G.	H.G.
17.5	99.5	211.4	At5g60640	836185	ATPDIL1-4 (PDI-LIKE 1-4)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.	O.I.	C.G.	H.G.
17.3	99.5	102.1	At5g12940	831134	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA	O.I.	C.G.	H.G.
17.3	99.5	58.2	At5g19930	832115	integral membrane family protein	F:unknown;P:unknown;C:endomembrane system;OBMAFP	O.I.	C.G.	H.G.
17.1	99.5	27.6	At1g10120	837549	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFOB	O.I.	C.G.	H.G.
16.9	99.5	213.8	At2g35120	818078	glycine cleavage system H protein, mitochondrial, putative	F:glycine dehydrogenase (decarboxylating) activity, ATP binding;P:glycine catabolic process;C:mitochondrion, glycine cleavage complex;BOPMFA	O.I.	C.G.	H.G.
16.9	99.5	34.0	At2g02780	814807	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
16.7	99.5	36.5	At3g16200	820866	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:Golgi apparatus;OPB	O.I.	C.G.	H.G.
16.6	99.5	14.4	At1g64920	842800	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO	O.I.	C.G.	H.G.
16.5	99.5	126.4	At3g17940	820642	aldose 1-epimerase family protein	F:isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
16.2	99.5	401.8	At2g22170	816751	lipid-associated family protein	F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast, membrane;PMO	O.I.	C.G.	H.G.
16.0	99.5	69.0	At5g41080	834110	glycerophosphoryl diester phosphodiesterase family protein	F:phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
15.9	99.5	27.3	At5g01620	831716	unknown protein	F:unknown;P:unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
15.8	99.5	205.2	At1g04430	839522	dehydration-responsive protein-related	F:unknown;P:biological_process unknown;C:Golgi apparatus, plasma membrane;PBO	O.I.	C.G.	H.G.
15.8	99.5	106.7	At1g47625	3767388	-	pseudogene of seven transmembrane domain protein	O.I.	C.G.	H.G.
15.7	99.5	96.2	At5g26740	832714	unknown protein	F:unknown;P:unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
15.7	99.5	36.8	At1g76260	843959	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFPOB	O.I.	C.G.	H.G.
15.4	99.5	43.4	At1g18640	838445	-	-	O.I.	C.G.	H.G.
15.4	99.5	14.2	At1g50520	841474	CYP705A27	member of CYP705A	O.I.	C.G.	H.G.
15.2	99.4	117.7	At1g76090	843941	SMT3 (STEROL METHYLTRANSFERASE 3)	Encodes S-adenosyl-methionine-sterol-C-methyltransferase, an enzyme in the sterol biosynthetic pathway.	O.I.	C.G.	H.G.
15.0	99.4	106.5	At1g67330	843054	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POB	O.I.	C.G.	H.G.
15.0	99.4	64.2	At4g22930	828392	PYR4 (PYRIMIDIN 4)	Encodes dihydroorotase (PYR4).	O.I.	C.G.	H.G.
15.0	99.4	12.9	At1g50580	841480	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBOF	O.I.	C.G.	H.G.
14.9	99.4	217.4	At3g02780	820960	IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2)	Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.	O.I.	C.G.	H.G.
14.9	99.4	56.8	At1g69030	843235	-	F:unknown;P:biological_process unknown;C:unknown;PMOFAB	O.I.	C.G.	H.G.
14.9	99.4	53.3	At4g29520	829073	-	F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;OMPFA	O.I.	C.G.	H.G.
14.8	99.4	75.0	At5g60950	836216	COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
14.7	99.4	164.8	At1g20950	838689	pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-related	F:diphosphate-fructose-6-phosphate 1-phosphotransferase activity;P:response to fructose stimulus, response to sucrose stimulus, response to glucose stimulus;C:pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex;BOPAM	O.I.	C.G.	H.G.
14.6	99.4	68.3	At5g27920	832858	F-box family protein	F:ubiquitin-protein ligase activity;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	C.G.	H.G.
14.5	99.4	3.7	At2g22710	816801	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
14.3	99.4	69.1	At3g44320	823557	NIT3 (NITRILASE 3)	This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.	O.I.	C.G.	H.G.
14.2	99.4	22.8	At2g29710	817521	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
14.1	99.4	126.4	At2g42570	818857	unknown protein	F:unknown;P:biological_process unknown;C:vacuole;P	O.I.	C.G.	H.G.
14.1	99.4	67.4	At1g48160	841235	signal recognition particle 19 kDa protein, putative / SRP19, putative	F:7S RNA binding;P:protein targeting, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;MFAOP	O.I.	C.G.	H.G.

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GSM ID	GSM252691
Assay name	Section of Root from 270 mm to 340 mm harvested immediately rep2
GSE experiment	GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Microarray experiments to specifically-expressed genes

GSM ID GSM252691 Assay name Section of Root from 270 mm to 340 mm harvested immediately rep2 GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

GSM ID GSM252691

Assay name Section of Root from 270 mm to 340 mm harvested immediately rep2

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity