CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM252676

Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
97.1 99.9 108.8 At1g54890 841928 late embryogenesis abundant protein-related / LEA protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
90.3 99.9 183.6 At1g73620 843696 thaumatin-like protein, putative / pathogenesis-related protein, putative F:unknown;P:response to other organism;C:membrane;PMFBO O.I. C.G. H.G.
57.5 99.8 91.8 At1g74500 843791 bHLH family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
37.7 99.7 85.1 At3g04320 819587 endopeptidase inhibitor F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
37.5 99.7 96.6 At5g35940 833584 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM O.I. C.G. H.G.
34.8 99.7 159.9 At2g25980 817139 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
33.2 99.7 134.1 At1g05205 839266 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
30.9 99.7 68.6 At4g17190 827430 FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2) Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers. O.I. C.G. H.G.
28.2 99.7 64.4 At2g20515 816573 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
27.7 99.7 62.5 At1g13590 837920 ATPSK1 (PHYTOSULFOKINE 1 PRECURSOR) Encodes a phytosulfokine-alpha (PSK) precursor, a unique plant peptide growth factor first described in Asparagus. O.I. C.G. H.G.
25.2 99.6 37.1 At3g19200 821454 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
24.0 99.6 248.4 At2g43610 818963 glycoside hydrolase family 19 protein F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:plasma membrane;PBFOVM O.I. C.G. H.G.
22.6 99.6 30.9 At3g18510 821381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
22.5 99.6 48.1 At4g31320 829259 auxin-responsive protein, putative / small auxin up RNA (SAUR_C) F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
21.5 99.6 42.3 At5g48110 834863 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO O.I. C.G. H.G.
19.1 99.6 10.7 At3g59850 825155 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
19.0 99.5 30.4 At3g23470 821928 cyclopropane-fatty-acyl-phospholipid synthase F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM O.I. C.G. H.G.
18.5 99.5 98.4 At1g07070 837218 60S ribosomal protein L35a (RPL35aA) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA O.I. C.G. H.G.
18.5 99.5 58.7 At3g62810 825456 complex 1 family protein / LVR family protein F:catalytic activity;P:unknown;C:unknown;MFPO O.I. C.G. H.G.
18.5 99.5 18.6 At2g23050 816835 NPY4 (NAKED PINS IN YUC MUTANTS 4) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. O.I. C.G. H.G.
18.4 99.5 263.6 At4g15910 827273 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants. O.I. C.G. H.G.
18.0 99.5 110.1 At2g41800 818779 - F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;P O.I. C.G. H.G.
17.7 99.5 15.2 At1g73160 843647 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPM O.I. C.G. H.G.
17.5 99.5 110.4 At1g17490 838322 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
17.5 99.5 81.5 At5g60950 836216 COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR) F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
17.3 99.5 184.8 At2g40360 818629 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:rRNA processing;C:nucleus;BMOFPVA O.I. C.G. H.G.
17.0 99.5 80.5 At4g17460 827457 HAT1 Encodes homeobox protein HAT1. O.I. C.G. H.G.
15.3 99.4 317.5 At2g25210 817059 60S ribosomal protein L39 (RPL39A) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP O.I. C.G. H.G.
15.3 99.4 39.1 At2g19385 816457 zinc ion binding F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPB O.I. C.G. H.G.
15.2 99.4 246.4 At3g06680 819853 60S ribosomal protein L29 (RPL29B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOPF O.I. C.G. H.G.
15.2 99.4 26.0 At5g51500 835224 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
15.1 99.4 21.1 At1g56680 842124 glycoside hydrolase family 19 protein F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBOMFV O.I. C.G. H.G.
14.9 99.4 109.0 At3g06320 819806 ribosomal protein L33 family protein F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF O.I. C.G. H.G.
14.7 99.4 136.7 At1g16740 838245 ribosomal protein L20 family protein F:structural constituent of ribosome, RNA binding;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOPM O.I. C.G. H.G.
14.5 99.4 333.0 At5g64140 836535 RPS28 (RIBOSOMAL PROTEIN S28) Encodes a putative ribosomal protein S28. O.I. C.G. H.G.
14.5 99.4 136.5 At2g03870 814913 small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative F:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFAOP O.I. C.G. H.G.
14.5 99.4 80.4 At5g16060 831463 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOM O.I. C.G. H.G.
14.5 99.4 66.8 At1g73940 843731 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.1 99.4 339.5 At3g06700 819855 60S ribosomal protein L29 (RPL29A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOPF O.I. C.G. H.G.
14.1 99.4 44.2 At3g55170 824683 60S ribosomal protein L35 (RPL35C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOBAFP O.I. C.G. H.G.
14.0 99.4 73.7 At1g16000 838170 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.0 99.4 39.7 At1g23750 838985 DNA-binding protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PAO O.I. C.G. H.G.
13.9 99.4 205.6 At3g10090 820170 40S ribosomal protein S28 (RPS28A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall;MOAPF O.I. C.G. H.G.
13.9 99.4 65.1 At1g64750 842783 ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I)) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
13.7 99.4 369.9 At2g22170 816751 lipid-associated family protein F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast, membrane;PMO O.I. C.G. H.G.
13.7 99.4 94.1 At2g30000 817551 - F:unknown;P:unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
13.7 99.4 51.5 At1g62810 842580 copper amine oxidase, putative F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
13.7 99.4 23.8 At1g02430 839242 ATARFD1B (ADP-ribosylation factor D1B) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. O.I. C.G. H.G.
13.7 99.4 13.4 At1g50520 841474 CYP705A27 member of CYP705A O.I. C.G. H.G.
13.6 99.4 167.8 At2g39390 818524 60S ribosomal protein L35 (RPL35B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOBAFP O.I. C.G. H.G.
13.3 99.4 11.3 At2g31725 817729 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
13.2 99.4 291.2 At1g66270 842944 BGLU21 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA O.I. C.G. H.G.
13.0 99.4 520.9 At4g29390 829060 40S ribosomal protein S30 (RPS30B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, nucleolus;MOFPAV O.I. C.G. H.G.
13.0 99.4 313.3 At4g10480 826640 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV O.I. C.G. H.G.
12.9 99.3 53.3 At1g08780 837400 AIP3 (ABI3-INTERACTING PROTEIN 3) F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOPA O.I. C.G. H.G.
12.7 99.3 126.2 At3g54960 824661 ATPDIL1-3 (PDI-LIKE 1-3) Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. O.I. C.G. H.G.
12.6 99.3 205.2 At3g57150 824882 NAP57 (Arabidopsis thaliana homologue of NAP57) Encodes a putative pseudouridine synthase (NAP57). O.I. C.G. H.G.
12.6 99.3 77.5 At4g31120 829240 SKB1 (SHK1 BINDING PROTEIN 1) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification. O.I. C.G. H.G.
12.6 99.3 53.8 At5g20400 832162 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. O.I. C.G. H.G.
12.5 99.3 139.3 At1g54690 841910 GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX) Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10�20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin. O.I. C.G. H.G.
12.5 99.3 13.2 At3g06840 819868 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.4 99.3 117.2 At1g17180 838289 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
12.4 99.3 95.0 At5g58590 835973 RANBP1 (RAN BINDING PROTEIN 1) Encodes a Ran-binding protein 1 homolog (RanBP1). O.I. C.G. H.G.
12.3 99.3 48.0 At2g07340 815304 prefoldin-related KE2 family protein F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFAPO O.I. C.G. H.G.
12.3 99.3 21.1 At4g29430 829064 rps15ae (ribosomal protein S15A E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF O.I. C.G. H.G.
12.1 99.3 46.1 At1g23410 838949 ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) F:protein binding, structural constituent of ribosome;P:protein ubiquitination during ubiquitin-dependent protein catabolic process, protein modification process, translation;C:cytosolic small ribosomal subunit, plasma membrane;MPOFVAB O.I. C.G. H.G.
11.7 99.3 25.1 At2g41810 818780 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB O.I. C.G. H.G.
11.6 99.3 56.6 At4g22930 828392 PYR4 (PYRIMIDIN 4) Encodes dihydroorotase (PYR4). O.I. C.G. H.G.
11.6 99.3 35.4 At5g39800 833976 60S ribosomal protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;MFPO O.I. C.G. H.G.
11.5 99.3 153.7 At1g61570 842453 TIM13 (TRANSLOCASE OF THE INNER MITOCHONDRIAL MEMBRANE 13) Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space. O.I. C.G. H.G.
11.4 99.3 257.4 At5g67510 836887 60S ribosomal protein L26 (RPL26B) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit;MAOFPB O.I. C.G. H.G.
11.4 99.3 136.1 At5g14800 831332 P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE) Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis. O.I. C.G. H.G.
11.4 99.3 21.0 At1g23100 838918 10 kDa chaperonin, putative F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV O.I. C.G. H.G.
11.3 99.3 42.7 At3g17300 820993 - F:unknown;P:unknown;C:unknown;PO O.I. C.G. H.G.
11.2 99.2 292.1 At3g12390 820418 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative F:unknown;P:response to salt stress;C:cytosolic ribosome;MOFBPVA O.I. C.G. H.G.
11.1 99.2 65.2 At3g01740 821088 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO O.I. C.G. H.G.
11.0 99.2 314.3 At4g31985 829329 60S ribosomal protein L39 (RPL39C) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP O.I. C.G. H.G.
11.0 99.2 25.6 At1g31950 840085 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO O.I. C.G. H.G.
10.9 99.2 110.9 At4g00585 828026 unknown protein F:molecular_function unknown;P:photorespiration;C:mitochondrial membrane, respiratory chain complex I;PFMO O.I. C.G. H.G.
10.9 99.2 90.1 At1g01210 839481 DNA-directed RNA polymerase III family protein F:in 6 functions;P:RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription;C:nucleus;MOFAP O.I. C.G. H.G.
10.9 99.2 45.6 At4g29520 829073 - F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;OMPFA O.I. C.G. H.G.
10.9 99.2 41.9 At3g50900 824254 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
10.9 99.2 7.6 At5g59070 836024 glycosyl transferase family 1 protein F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;BOAPMF O.I. C.G. H.G.
10.8 99.2 121.1 At4g25890 828695 60S acidic ribosomal protein P3 (RPP3A) F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome, nucleus, plasma membrane;MPFOB O.I. C.G. H.G.
10.8 99.2 90.4 At1g72170 843548 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPO O.I. C.G. H.G.
10.8 99.2 39.7 At5g44710 834500 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMO O.I. C.G. H.G.
10.6 99.2 349.6 At2g43460 818947 60S ribosomal protein L38 (RPL38A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOFPA O.I. C.G. H.G.
10.6 99.2 103.6 At3g02190 820350 60S ribosomal protein L39 (RPL39B) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAOFP O.I. C.G. H.G.
10.6 99.2 74.0 At1g04870 839393 PRMT10 Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts. O.I. C.G. H.G.
10.6 99.2 27.2 At3g03420 821258 Ku70-binding family protein F:binding;P:unknown;C:cellular_component unknown;FMOP O.I. C.G. H.G.
10.5 99.2 99.0 At5g54900 835581 ATRBP45A (RNA-binding protein 45A) F:RNA binding;P:unknown;C:unknown;MPFOBA O.I. C.G. H.G.
10.5 99.2 38.8 At2g43780 818981 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
10.4 99.2 445.5 At3g16080 820853 60S ribosomal protein L37 (RPL37C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP O.I. C.G. H.G.
10.4 99.2 158.3 At1g74270 843767 60S ribosomal protein L35a (RPL35aC) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA O.I. C.G. H.G.
10.3 99.2 54.9 At5g61220 836243 complex 1 family protein / LVR family protein F:catalytic activity;P:unknown;C:unknown;MFPO O.I. C.G. H.G.
10.3 99.2 46.4 At3g50660 824229 DWF4 (DWARF 4) Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate. O.I. C.G. H.G.
10.2 99.2 496.4 At1g09590 837486 60S ribosomal protein L21 (RPL21A) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, nucleolus, chloroplast;MOAFP O.I. C.G. H.G.
10.2 99.2 29.8 At2g14460 815934 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
10.1 99.2 169.8 At3g58700 825039 60S ribosomal protein L11 (RPL11B) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, vacuole;BOAMPF O.I. C.G. H.G.
10.1 99.2 96.9 At2g46390 819247 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
97.1	99.9	108.8	At1g54890	841928	late embryogenesis abundant protein-related / LEA protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
90.3	99.9	183.6	At1g73620	843696	thaumatin-like protein, putative / pathogenesis-related protein, putative	F:unknown;P:response to other organism;C:membrane;PMFBO	O.I.	C.G.	H.G.
57.5	99.8	91.8	At1g74500	843791	bHLH family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
37.7	99.7	85.1	At3g04320	819587	endopeptidase inhibitor	F:endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
37.5	99.7	96.6	At5g35940	833584	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM	O.I.	C.G.	H.G.
34.8	99.7	159.9	At2g25980	817139	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
33.2	99.7	134.1	At1g05205	839266	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.9	99.7	68.6	At4g17190	827430	FPS2 (FARNESYL DIPHOSPHATE SYNTHASE 2)	Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.	O.I.	C.G.	H.G.
28.2	99.7	64.4	At2g20515	816573	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
27.7	99.7	62.5	At1g13590	837920	ATPSK1 (PHYTOSULFOKINE 1 PRECURSOR)	Encodes a phytosulfokine-alpha (PSK) precursor, a unique plant peptide growth factor first described in Asparagus.	O.I.	C.G.	H.G.
25.2	99.6	37.1	At3g19200	821454	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
24.0	99.6	248.4	At2g43610	818963	glycoside hydrolase family 19 protein	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:plasma membrane;PBFOVM	O.I.	C.G.	H.G.
22.6	99.6	30.9	At3g18510	821381	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
22.5	99.6	48.1	At4g31320	829259	auxin-responsive protein, putative / small auxin up RNA (SAUR_C)	F:calmodulin binding;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
21.5	99.6	42.3	At5g48110	834863	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO	O.I.	C.G.	H.G.
19.1	99.6	10.7	At3g59850	825155	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
19.0	99.5	30.4	At3g23470	821928	cyclopropane-fatty-acyl-phospholipid synthase	F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM	O.I.	C.G.	H.G.
18.5	99.5	98.4	At1g07070	837218	60S ribosomal protein L35a (RPL35aA)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA	O.I.	C.G.	H.G.
18.5	99.5	58.7	At3g62810	825456	complex 1 family protein / LVR family protein	F:catalytic activity;P:unknown;C:unknown;MFPO	O.I.	C.G.	H.G.
18.5	99.5	18.6	At2g23050	816835	NPY4 (NAKED PINS IN YUC MUTANTS 4)	A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.	O.I.	C.G.	H.G.
18.4	99.5	263.6	At4g15910	827273	ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)	encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.	O.I.	C.G.	H.G.
18.0	99.5	110.1	At2g41800	818779	-	F:molecular_function unknown;P:biological_process unknown;C:cell wall, plant-type cell wall;P	O.I.	C.G.	H.G.
17.7	99.5	15.2	At1g73160	843647	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:unknown;BOAFPM	O.I.	C.G.	H.G.
17.5	99.5	110.4	At1g17490	838322	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
17.5	99.5	81.5	At5g60950	836216	COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
17.3	99.5	184.8	At2g40360	818629	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:rRNA processing;C:nucleus;BMOFPVA	O.I.	C.G.	H.G.
17.0	99.5	80.5	At4g17460	827457	HAT1	Encodes homeobox protein HAT1.	O.I.	C.G.	H.G.
15.3	99.4	317.5	At2g25210	817059	60S ribosomal protein L39 (RPL39A)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP	O.I.	C.G.	H.G.
15.3	99.4	39.1	At2g19385	816457	zinc ion binding	F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPB	O.I.	C.G.	H.G.
15.2	99.4	246.4	At3g06680	819853	60S ribosomal protein L29 (RPL29B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOPF	O.I.	C.G.	H.G.
15.2	99.4	26.0	At5g51500	835224	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
15.1	99.4	21.1	At1g56680	842124	glycoside hydrolase family 19 protein	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBOMFV	O.I.	C.G.	H.G.
14.9	99.4	109.0	At3g06320	819806	ribosomal protein L33 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF	O.I.	C.G.	H.G.
14.7	99.4	136.7	At1g16740	838245	ribosomal protein L20 family protein	F:structural constituent of ribosome, RNA binding;P:translation, ribosome biogenesis;C:ribosome, intracellular;BOPM	O.I.	C.G.	H.G.
14.5	99.4	333.0	At5g64140	836535	RPS28 (RIBOSOMAL PROTEIN S28)	Encodes a putative ribosomal protein S28.	O.I.	C.G.	H.G.
14.5	99.4	136.5	At2g03870	814913	small nuclear ribonucleoprotein, putative / snRNP, putative / Sm protein, putative	F:molecular_function unknown;P:unknown;C:small nucleolar ribonucleoprotein complex, nucleus;MFAOP	O.I.	C.G.	H.G.
14.5	99.4	80.4	At5g16060	831463	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
14.5	99.4	66.8	At1g73940	843731	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.1	99.4	339.5	At3g06700	819855	60S ribosomal protein L29 (RPL29A)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOPF	O.I.	C.G.	H.G.
14.1	99.4	44.2	At3g55170	824683	60S ribosomal protein L35 (RPL35C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOBAFP	O.I.	C.G.	H.G.
14.0	99.4	73.7	At1g16000	838170	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.0	99.4	39.7	At1g23750	838985	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PAO	O.I.	C.G.	H.G.
13.9	99.4	205.6	At3g10090	820170	40S ribosomal protein S28 (RPS28A)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, cell wall;MOAPF	O.I.	C.G.	H.G.
13.9	99.4	65.1	At1g64750	842783	ATDSS1(I) (ARABIDOPSIS THALIANA DELETION OF SUV3 SUPRESSOR 1(I))	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
13.7	99.4	369.9	At2g22170	816751	lipid-associated family protein	F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast, membrane;PMO	O.I.	C.G.	H.G.
13.7	99.4	94.1	At2g30000	817551	-	F:unknown;P:unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
13.7	99.4	51.5	At1g62810	842580	copper amine oxidase, putative	F:amine oxidase activity, quinone binding, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
13.7	99.4	23.8	At1g02430	839242	ATARFD1B (ADP-ribosylation factor D1B)	A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins.	O.I.	C.G.	H.G.
13.7	99.4	13.4	At1g50520	841474	CYP705A27	member of CYP705A	O.I.	C.G.	H.G.
13.6	99.4	167.8	At2g39390	818524	60S ribosomal protein L35 (RPL35B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOBAFP	O.I.	C.G.	H.G.
13.3	99.4	11.3	At2g31725	817729	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
13.2	99.4	291.2	At1g66270	842944	BGLU21	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA	O.I.	C.G.	H.G.
13.0	99.4	520.9	At4g29390	829060	40S ribosomal protein S30 (RPS30B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, nucleolus;MOFPAV	O.I.	C.G.	H.G.
13.0	99.4	313.3	At4g10480	826640	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV	O.I.	C.G.	H.G.
12.9	99.3	53.3	At1g08780	837400	AIP3 (ABI3-INTERACTING PROTEIN 3)	F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOPA	O.I.	C.G.	H.G.
12.7	99.3	126.2	At3g54960	824661	ATPDIL1-3 (PDI-LIKE 1-3)	Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.	O.I.	C.G.	H.G.
12.6	99.3	205.2	At3g57150	824882	NAP57 (Arabidopsis thaliana homologue of NAP57)	Encodes a putative pseudouridine synthase (NAP57).	O.I.	C.G.	H.G.
12.6	99.3	77.5	At4g31120	829240	SKB1 (SHK1 BINDING PROTEIN 1)	Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.	O.I.	C.G.	H.G.
12.6	99.3	53.8	At5g20400	832162	oxidoreductase, 2OG-Fe(II) oxygenase family protein	encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.	O.I.	C.G.	H.G.
12.5	99.3	139.3	At1g54690	841910	GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX)	Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (γ-H2AX) occurs around the break site. H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse γ-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no γ-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of γ-H2AX to a maximum of >50 diffuse foci. The level of γH2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10�20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.	O.I.	C.G.	H.G.
12.5	99.3	13.2	At3g06840	819868	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.4	99.3	117.2	At1g17180	838289	ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
12.4	99.3	95.0	At5g58590	835973	RANBP1 (RAN BINDING PROTEIN 1)	Encodes a Ran-binding protein 1 homolog (RanBP1).	O.I.	C.G.	H.G.
12.3	99.3	48.0	At2g07340	815304	prefoldin-related KE2 family protein	F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFAPO	O.I.	C.G.	H.G.
12.3	99.3	21.1	At4g29430	829064	rps15ae (ribosomal protein S15A E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF	O.I.	C.G.	H.G.
12.1	99.3	46.1	At1g23410	838949	ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA)	F:protein binding, structural constituent of ribosome;P:protein ubiquitination during ubiquitin-dependent protein catabolic process, protein modification process, translation;C:cytosolic small ribosomal subunit, plasma membrane;MPOFVAB	O.I.	C.G.	H.G.
11.7	99.3	25.1	At2g41810	818780	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
11.6	99.3	56.6	At4g22930	828392	PYR4 (PYRIMIDIN 4)	Encodes dihydroorotase (PYR4).	O.I.	C.G.	H.G.
11.6	99.3	35.4	At5g39800	833976	60S ribosomal protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;MFPO	O.I.	C.G.	H.G.
11.5	99.3	153.7	At1g61570	842453	TIM13 (TRANSLOCASE OF THE INNER MITOCHONDRIAL MEMBRANE 13)	Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.	O.I.	C.G.	H.G.
11.4	99.3	257.4	At5g67510	836887	60S ribosomal protein L26 (RPL26B)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, large ribosomal subunit;MAOFPB	O.I.	C.G.	H.G.
11.4	99.3	136.1	At5g14800	831332	P5CR (PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE)	Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.	O.I.	C.G.	H.G.
11.4	99.3	21.0	At1g23100	838918	10 kDa chaperonin, putative	F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV	O.I.	C.G.	H.G.
11.3	99.3	42.7	At3g17300	820993	-	F:unknown;P:unknown;C:unknown;PO	O.I.	C.G.	H.G.
11.2	99.2	292.1	At3g12390	820418	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	F:unknown;P:response to salt stress;C:cytosolic ribosome;MOFBPVA	O.I.	C.G.	H.G.
11.1	99.2	65.2	At3g01740	821088	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO	O.I.	C.G.	H.G.
11.0	99.2	314.3	At4g31985	829329	60S ribosomal protein L39 (RPL39C)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP	O.I.	C.G.	H.G.
11.0	99.2	25.6	At1g31950	840085	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:membrane;PO	O.I.	C.G.	H.G.
10.9	99.2	110.9	At4g00585	828026	unknown protein	F:molecular_function unknown;P:photorespiration;C:mitochondrial membrane, respiratory chain complex I;PFMO	O.I.	C.G.	H.G.
10.9	99.2	90.1	At1g01210	839481	DNA-directed RNA polymerase III family protein	F:in 6 functions;P:RNA elongation, regulation of transcription, DNA-dependent, transcription, regulation of transcription;C:nucleus;MOFAP	O.I.	C.G.	H.G.
10.9	99.2	45.6	At4g29520	829073	-	F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;OMPFA	O.I.	C.G.	H.G.
10.9	99.2	41.9	At3g50900	824254	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
10.9	99.2	7.6	At5g59070	836024	glycosyl transferase family 1 protein	F:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;BOAPMF	O.I.	C.G.	H.G.
10.8	99.2	121.1	At4g25890	828695	60S acidic ribosomal protein P3 (RPP3A)	F:structural constituent of ribosome;P:translational elongation;C:cytosolic ribosome, ribosome, nucleus, plasma membrane;MPFOB	O.I.	C.G.	H.G.
10.8	99.2	90.4	At1g72170	843548	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MPO	O.I.	C.G.	H.G.
10.8	99.2	39.7	At5g44710	834500	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;FPMO	O.I.	C.G.	H.G.
10.6	99.2	349.6	At2g43460	818947	60S ribosomal protein L38 (RPL38A)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome;MOFPA	O.I.	C.G.	H.G.
10.6	99.2	103.6	At3g02190	820350	60S ribosomal protein L39 (RPL39B)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAOFP	O.I.	C.G.	H.G.
10.6	99.2	74.0	At1g04870	839393	PRMT10	Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.	O.I.	C.G.	H.G.
10.6	99.2	27.2	At3g03420	821258	Ku70-binding family protein	F:binding;P:unknown;C:cellular_component unknown;FMOP	O.I.	C.G.	H.G.
10.5	99.2	99.0	At5g54900	835581	ATRBP45A (RNA-binding protein 45A)	F:RNA binding;P:unknown;C:unknown;MPFOBA	O.I.	C.G.	H.G.
10.5	99.2	38.8	At2g43780	818981	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
10.4	99.2	445.5	At3g16080	820853	60S ribosomal protein L37 (RPL37C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP	O.I.	C.G.	H.G.
10.4	99.2	158.3	At1g74270	843767	60S ribosomal protein L35a (RPL35aC)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA	O.I.	C.G.	H.G.
10.3	99.2	54.9	At5g61220	836243	complex 1 family protein / LVR family protein	F:catalytic activity;P:unknown;C:unknown;MFPO	O.I.	C.G.	H.G.
10.3	99.2	46.4	At3g50660	824229	DWF4 (DWARF 4)	Encodes a 22α hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. CLM is an epi-allele with small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.	O.I.	C.G.	H.G.
10.2	99.2	496.4	At1g09590	837486	60S ribosomal protein L21 (RPL21A)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, nucleolus, chloroplast;MOAFP	O.I.	C.G.	H.G.
10.2	99.2	29.8	At2g14460	815934	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
10.1	99.2	169.8	At3g58700	825039	60S ribosomal protein L11 (RPL11B)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, vacuole;BOAMPF	O.I.	C.G.	H.G.
10.1	99.2	96.9	At2g46390	819247	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.

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GSM ID	GSM252676
Assay name	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2
GSE experiment	GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Microarray experiments to specifically-expressed genes

GSM ID GSM252676 Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2 GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

GSM ID GSM252676

Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 13 hrs Taking 70 mm of Stump (4dpg) rep2

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity