CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM252667

Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep1

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
334.9 100.0 306.8 At5g63660 836486 PDF2.5 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. O.I. C.G. H.G.
72.6 99.9 1361.5 At4g39200 830075 40S ribosomal protein S25 (RPS25E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MFPOA O.I. C.G. H.G.
71.2 99.9 238.6 At3g06320 819806 ribosomal protein L33 family protein F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF O.I. C.G. H.G.
56.1 99.8 68.3 At5g48110 834863 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO O.I. C.G. H.G.
52.3 99.8 142.3 At1g16000 838170 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
44.2 99.8 154.7 At1g05205 839266 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.4 99.7 33.0 At5g57980 835909 RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C) NRPB5-like protein of unknown function; homologous to budding yeast RPB5 O.I. C.G. H.G.
35.4 99.7 30.5 At5g05680 830452 nuclear pore complex protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBA O.I. C.G. H.G.
35.2 99.7 519.2 At5g64140 836535 RPS28 (RIBOSOMAL PROTEIN S28) Encodes a putative ribosomal protein S28. O.I. C.G. H.G.
34.6 99.7 48.7 At1g46264 841110 AT-HSFB4 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
34.2 99.7 31.1 At3g15240 820755 - - O.I. C.G. H.G.
32.4 99.7 138.8 At3g52040 824367 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
30.5 99.7 58.8 At5g02550 831052 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
30.4 99.7 877.5 At1g77940 844129 60S ribosomal protein L30 (RPL30B) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit;MOAFPB O.I. C.G. H.G.
29.5 99.7 334.2 At4g15910 827273 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants. O.I. C.G. H.G.
29.5 99.7 160.7 At5g15320 831384 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
29.2 99.7 123.7 At1g07070 837218 60S ribosomal protein L35a (RPL35aA) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA O.I. C.G. H.G.
29.2 99.7 53.1 At3g54770 824642 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
28.5 99.7 433.2 At2g25210 817059 60S ribosomal protein L39 (RPL39A) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP O.I. C.G. H.G.
28.1 99.7 764.8 At4g29390 829060 40S ribosomal protein S30 (RPS30B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, nucleolus;MOFPAV O.I. C.G. H.G.
27.4 99.7 13.6 At5g57080 835812 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.5 99.7 43.9 At3g02120 821311 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;P O.I. C.G. H.G.
23.7 99.6 991.4 At3g52590 824425 UBQ1 (UBIQUITIN EXTENSION PROTEIN 1) Ubiquitin extension protein O.I. C.G. H.G.
22.9 99.6 639.7 At3g09500 820107 60S ribosomal protein L35 (RPL35A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOBAFP O.I. C.G. H.G.
22.5 99.6 449.5 At4g31985 829329 60S ribosomal protein L39 (RPL39C) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP O.I. C.G. H.G.
22.4 99.6 26.8 At2g42110 818811 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
22.3 99.6 228.6 At5g02610 831853 60S ribosomal protein L35 (RPL35D) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, plasma membrane;MOBAFP O.I. C.G. H.G.
20.8 99.6 50.8 At1g21700 838774 ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C) a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003). O.I. C.G. H.G.
20.6 99.6 253.2 At4g29735 829095 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO O.I. C.G. H.G.
20.2 99.6 199.5 At2g40360 818629 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:rRNA processing;C:nucleus;BMOFPVA O.I. C.G. H.G.
20.2 99.6 43.7 At1g70350 843371 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
20.1 99.6 64.2 At5g57090 835813 EIR1 (ETHYLENE INSENSITIVE ROOT 1) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity. O.I. C.G. H.G.
20.1 99.6 11.6 At4g00530 827975 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
19.3 99.6 51.7 At3g55170 824683 60S ribosomal protein L35 (RPL35C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOBAFP O.I. C.G. H.G.
19.1 99.6 30.5 At3g23470 821928 cyclopropane-fatty-acyl-phospholipid synthase F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM O.I. C.G. H.G.
18.9 99.5 56.6 At1g57540 842129 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
18.4 99.5 283.0 At5g66680 836801 DGL1 Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins. O.I. C.G. H.G.
18.0 99.5 772.8 At1g41880 840799 60S ribosomal protein L35a (RPL35aB) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, membrane;MOFPA O.I. C.G. H.G.
17.6 99.5 20.2 At1g26660 839206 c-myc binding protein, putative / prefoldin, putative F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOPAB O.I. C.G. H.G.
16.9 99.5 12.2 At2g20480 816568 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
16.8 99.5 84.3 At5g20660 832189 24 kDa vacuolar protein, putative F:peptidase activity;P:proteolysis;C:unknown;MBFOPA O.I. C.G. H.G.
16.6 99.5 384.4 At3g45980 823741 HTB9 Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition. O.I. C.G. H.G.
16.3 99.5 70.0 At4g16170 827309 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;PO O.I. C.G. H.G.
16.3 99.5 7.7 At2g16230 816120 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
16.2 99.5 64.5 At2g37975 818375 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
16.0 99.5 60.6 At5g20400 832162 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. O.I. C.G. H.G.
15.9 99.5 56.0 At5g27400 832799 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
15.9 99.5 15.1 At4g28820 829003 zinc finger (HIT type) family protein F:unknown;P:biological_process unknown;C:unknown;MFOPB O.I. C.G. H.G.
15.9 99.5 5.2 At5g27170 832775 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast O.I. C.G. H.G.
15.6 99.5 1099.5 At3g60245 825195 60S ribosomal protein L37a (RPL37aC) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP O.I. C.G. H.G.
15.5 99.5 10.6 At3g49630 824125 2-oxoacid-dependent oxidase, putative F:oxidoreductase activity, iron ion binding;P:aging, cellular response to starvation;C:endomembrane system;POBFM O.I. C.G. H.G.
14.9 99.4 86.0 At4g34555 829607 40S ribosomal protein S25, putative F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome;MFPOA O.I. C.G. H.G.
14.6 99.4 529.1 At3g16080 820853 60S ribosomal protein L37 (RPL37C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP O.I. C.G. H.G.
14.6 99.4 16.0 At3g62050 825378 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM O.I. C.G. H.G.
14.5 99.4 9.4 At1g26700 839211 MLO14 (MILDEW RESISTANCE LOCUS O 14) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO14 belongs to the clade I, with AtMLO4 and AtMLO11. The gene is expressed during early seedling growth, in developing primary root, and particularly in root tips of 10-day old seedlings; it was not expressed in leaves or flowers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
14.4 99.4 103.5 At1g49410 841365 TOM6 (translocase of the outer mitochondrial membrane 6) F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
14.4 99.4 36.0 At1g17560 838332 HLL (HUELLENLOS) Mutant shows abnormal ovule development O.I. C.G. H.G.
14.3 99.4 421.7 At1g74050 843744 60S ribosomal protein L6 (RPL6C) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, intracellular, plasma membrane, membrane;MOFPA O.I. C.G. H.G.
14.3 99.4 82.4 At4g31120 829240 SKB1 (SHK1 BINDING PROTEIN 1) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification. O.I. C.G. H.G.
14.2 99.4 21.4 At4g33100 829447 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
14.0 99.4 322.4 At4g29410 829062 60S ribosomal protein L28 (RPL28C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MPFO O.I. C.G. H.G.
13.9 99.4 47.1 At5g51620 835236 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.9 99.4 22.6 At1g08220 837343 - F:molecular_function unknown;P:mitochondrial proton-transporting ATP synthase complex assembly;C:mitochondrial inner membrane;FPOAM O.I. C.G. H.G.
13.7 99.4 719.8 At2g19730 816492 60S ribosomal protein L28 (RPL28A) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:in 6 components;MPFO O.I. C.G. H.G.
13.7 99.4 132.7 At2g28020 817346 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.7 99.4 40.3 At2g35190 818086 NPSN11 (NOVEL PLANT SNARE 11) plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate. O.I. C.G. H.G.
13.6 99.4 696.9 At1g15930 838163 40S ribosomal protein S12 (RPS12A) F:structural constituent of ribosome;P:response to cadmium ion, response to salt stress, translation;C:cytosolic small ribosomal subunit, cytosolic ribosome;MAOFP O.I. C.G. H.G.
13.6 99.4 356.5 At3g14600 820688 60S ribosomal protein L18A (RPL18aC) F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, membrane;MOFP O.I. C.G. H.G.
13.3 99.4 140.2 At3g47836 823939 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.3 99.4 19.2 At4g01730 826911 zinc ion binding F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP O.I. C.G. H.G.
13.3 99.4 3.5 At2g04380 814977 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.1 99.4 63.7 At1g63050 842608 membrane bound O-acyl transferase (MBOAT) family protein F:acyltransferase activity;P:biological_process unknown;C:endomembrane system, membrane;MFOBP O.I. C.G. H.G.
13.1 99.4 14.3 At2g04500 814991 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;POM O.I. C.G. H.G.
13.0 99.4 11.9 At1g64220 842727 TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2) F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;P O.I. C.G. H.G.
12.9 99.3 190.4 At2g31490 817707 unknown protein F:molecular_function unknown;P:photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I;P O.I. C.G. H.G.
12.9 99.3 91.2 At3g19910 821529 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBVA O.I. C.G. H.G.
12.7 99.3 577.9 At5g27850 832848 60S ribosomal protein L18 (RPL18C) F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane;MOFPA O.I. C.G. H.G.
12.7 99.3 7.2 At3g49020 824063 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:nucleus;PM O.I. C.G. H.G.
12.4 99.3 42.9 At4g15640 827241 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
12.0 99.3 51.8 At3g52420 824407 OEP7 (OUTER ENVELOPE MEMBRANE PROTEIN 7) encodes a 7 kDa chloroplast outer envelope membrane protein. O.I. C.G. H.G.
12.0 99.3 6.3 At2g18970 816414 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
11.8 99.3 434.6 At4g09800 826569 RPS18C (S18 RIBOSOMAL PROTEIN) encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex O.I. C.G. H.G.
11.7 99.3 321.0 At5g02450 831907 60S ribosomal protein L36 (RPL36C) F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MOFP O.I. C.G. H.G.
11.7 99.3 30.7 At4g10620 826654 - F:unknown;P:biological_process unknown;C:chloroplast;BMFOPA O.I. C.G. H.G.
11.7 99.3 16.2 At2g30340 817584 LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13) F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFVBA O.I. C.G. H.G.
11.7 99.3 3.3 At4g09930 826582 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:cellular_component unknown;MOBPFVA O.I. C.G. H.G.
11.6 99.3 670.3 At3g49010 824062 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1). O.I. C.G. H.G.
11.6 99.3 24.6 At4g37090 829863 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA O.I. C.G. H.G.
11.6 99.3 16.8 At1g06930 837204 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV O.I. C.G. H.G.
11.5 99.3 54.1 At5g09770 830837 ribosomal protein L17 family protein F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;BOFMP O.I. C.G. H.G.
11.5 99.3 17.0 At3g57360 824903 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP O.I. C.G. H.G.
11.5 99.3 10.4 At2g35460 818111 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein F:unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
11.2 99.2 61.2 At2g15000 815989 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
11.1 99.2 6.1 At4g21300 827878 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:unknown;C:unknown;POFMBA O.I. C.G. H.G.
11.1 99.2 4.6 At1g44740 841038 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
11.1 99.2 3.7 At5g56070 835705 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
11.0 99.2 40.6 At2g19670 816486 PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A) F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA O.I. C.G. H.G.
11.0 99.2 12.2 At5g03770 831727 3-deoxy-D-manno-octulosonic acid transferase-related F:transferase activity, transferring glycosyl groups;P:biosynthetic process, carbohydrate metabolic process;C:mitochondrion;OBP O.I. C.G. H.G.
10.8 99.2 436.5 At3g56340 824801 40S ribosomal protein S26 (RPS26C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MFOPA O.I. C.G. H.G.
10.6 99.2 136.0 At1g80830 844422 NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1) Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
334.9	100.0	306.8	At5g63660	836486	PDF2.5	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.	O.I.	C.G.	H.G.
72.6	99.9	1361.5	At4g39200	830075	40S ribosomal protein S25 (RPS25E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MFPOA	O.I.	C.G.	H.G.
71.2	99.9	238.6	At3g06320	819806	ribosomal protein L33 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF	O.I.	C.G.	H.G.
56.1	99.8	68.3	At5g48110	834863	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO	O.I.	C.G.	H.G.
52.3	99.8	142.3	At1g16000	838170	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
44.2	99.8	154.7	At1g05205	839266	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.4	99.7	33.0	At5g57980	835909	RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C)	NRPB5-like protein of unknown function; homologous to budding yeast RPB5	O.I.	C.G.	H.G.
35.4	99.7	30.5	At5g05680	830452	nuclear pore complex protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBA	O.I.	C.G.	H.G.
35.2	99.7	519.2	At5g64140	836535	RPS28 (RIBOSOMAL PROTEIN S28)	Encodes a putative ribosomal protein S28.	O.I.	C.G.	H.G.
34.6	99.7	48.7	At1g46264	841110	AT-HSFB4	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
34.2	99.7	31.1	At3g15240	820755	-	-	O.I.	C.G.	H.G.
32.4	99.7	138.8	At3g52040	824367	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
30.5	99.7	58.8	At5g02550	831052	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.4	99.7	877.5	At1g77940	844129	60S ribosomal protein L30 (RPL30B)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit;MOAFPB	O.I.	C.G.	H.G.
29.5	99.7	334.2	At4g15910	827273	ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)	encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.	O.I.	C.G.	H.G.
29.5	99.7	160.7	At5g15320	831384	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
29.2	99.7	123.7	At1g07070	837218	60S ribosomal protein L35a (RPL35aA)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOFPA	O.I.	C.G.	H.G.
29.2	99.7	53.1	At3g54770	824642	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
28.5	99.7	433.2	At2g25210	817059	60S ribosomal protein L39 (RPL39A)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP	O.I.	C.G.	H.G.
28.1	99.7	764.8	At4g29390	829060	40S ribosomal protein S30 (RPS30B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, nucleolus;MOFPAV	O.I.	C.G.	H.G.
27.4	99.7	13.6	At5g57080	835812	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.5	99.7	43.9	At3g02120	821311	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:response to cyclopentenone;C:cellular_component unknown;P	O.I.	C.G.	H.G.
23.7	99.6	991.4	At3g52590	824425	UBQ1 (UBIQUITIN EXTENSION PROTEIN 1)	Ubiquitin extension protein	O.I.	C.G.	H.G.
22.9	99.6	639.7	At3g09500	820107	60S ribosomal protein L35 (RPL35A)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, nucleolus;MOBAFP	O.I.	C.G.	H.G.
22.5	99.6	449.5	At4g31985	829329	60S ribosomal protein L39 (RPL39C)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome;MAFOP	O.I.	C.G.	H.G.
22.4	99.6	26.8	At2g42110	818811	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
22.3	99.6	228.6	At5g02610	831853	60S ribosomal protein L35 (RPL35D)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, plasma membrane;MOBAFP	O.I.	C.G.	H.G.
20.8	99.6	50.8	At1g21700	838774	ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C)	a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).	O.I.	C.G.	H.G.
20.6	99.6	253.2	At4g29735	829095	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPO	O.I.	C.G.	H.G.
20.2	99.6	199.5	At2g40360	818629	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:rRNA processing;C:nucleus;BMOFPVA	O.I.	C.G.	H.G.
20.2	99.6	43.7	At1g70350	843371	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
20.1	99.6	64.2	At5g57090	835813	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.	O.I.	C.G.	H.G.
20.1	99.6	11.6	At4g00530	827975	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
19.3	99.6	51.7	At3g55170	824683	60S ribosomal protein L35 (RPL35C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MOBAFP	O.I.	C.G.	H.G.
19.1	99.6	30.5	At3g23470	821928	cyclopropane-fatty-acyl-phospholipid synthase	F:cyclopropane-fatty-acyl-phospholipid synthase activity;P:lipid biosynthetic process;C:endomembrane system;OBFPAM	O.I.	C.G.	H.G.
18.9	99.5	56.6	At1g57540	842129	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
18.4	99.5	283.0	At5g66680	836801	DGL1	Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.	O.I.	C.G.	H.G.
18.0	99.5	772.8	At1g41880	840799	60S ribosomal protein L35a (RPL35aB)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, membrane;MOFPA	O.I.	C.G.	H.G.
17.6	99.5	20.2	At1g26660	839206	c-myc binding protein, putative / prefoldin, putative	F:unfolded protein binding;P:protein folding;C:prefoldin complex;MFOPAB	O.I.	C.G.	H.G.
16.9	99.5	12.2	At2g20480	816568	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.8	99.5	84.3	At5g20660	832189	24 kDa vacuolar protein, putative	F:peptidase activity;P:proteolysis;C:unknown;MBFOPA	O.I.	C.G.	H.G.
16.6	99.5	384.4	At3g45980	823741	HTB9	Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.	O.I.	C.G.	H.G.
16.3	99.5	70.0	At4g16170	827309	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;PO	O.I.	C.G.	H.G.
16.3	99.5	7.7	At2g16230	816120	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
16.2	99.5	64.5	At2g37975	818375	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
16.0	99.5	60.6	At5g20400	832162	oxidoreductase, 2OG-Fe(II) oxygenase family protein	encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.	O.I.	C.G.	H.G.
15.9	99.5	56.0	At5g27400	832799	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
15.9	99.5	15.1	At4g28820	829003	zinc finger (HIT type) family protein	F:unknown;P:biological_process unknown;C:unknown;MFOPB	O.I.	C.G.	H.G.
15.9	99.5	5.2	At5g27170	832775	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast	O.I.	C.G.	H.G.
15.6	99.5	1099.5	At3g60245	825195	60S ribosomal protein L37a (RPL37aC)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP	O.I.	C.G.	H.G.
15.5	99.5	10.6	At3g49630	824125	2-oxoacid-dependent oxidase, putative	F:oxidoreductase activity, iron ion binding;P:aging, cellular response to starvation;C:endomembrane system;POBFM	O.I.	C.G.	H.G.
14.9	99.4	86.0	At4g34555	829607	40S ribosomal protein S25, putative	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome;MFPOA	O.I.	C.G.	H.G.
14.6	99.4	529.1	At3g16080	820853	60S ribosomal protein L37 (RPL37C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP	O.I.	C.G.	H.G.
14.6	99.4	16.0	At3g62050	825378	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFM	O.I.	C.G.	H.G.
14.5	99.4	9.4	At1g26700	839211	MLO14 (MILDEW RESISTANCE LOCUS O 14)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO14 belongs to the clade I, with AtMLO4 and AtMLO11. The gene is expressed during early seedling growth, in developing primary root, and particularly in root tips of 10-day old seedlings; it was not expressed in leaves or flowers, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
14.4	99.4	103.5	At1g49410	841365	TOM6 (translocase of the outer mitochondrial membrane 6)	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
14.4	99.4	36.0	At1g17560	838332	HLL (HUELLENLOS)	Mutant shows abnormal ovule development	O.I.	C.G.	H.G.
14.3	99.4	421.7	At1g74050	843744	60S ribosomal protein L6 (RPL6C)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, intracellular, plasma membrane, membrane;MOFPA	O.I.	C.G.	H.G.
14.3	99.4	82.4	At4g31120	829240	SKB1 (SHK1 BINDING PROTEIN 1)	Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.	O.I.	C.G.	H.G.
14.2	99.4	21.4	At4g33100	829447	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
14.0	99.4	322.4	At4g29410	829062	60S ribosomal protein L28 (RPL28C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MPFO	O.I.	C.G.	H.G.
13.9	99.4	47.1	At5g51620	835236	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.9	99.4	22.6	At1g08220	837343	-	F:molecular_function unknown;P:mitochondrial proton-transporting ATP synthase complex assembly;C:mitochondrial inner membrane;FPOAM	O.I.	C.G.	H.G.
13.7	99.4	719.8	At2g19730	816492	60S ribosomal protein L28 (RPL28A)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:in 6 components;MPFO	O.I.	C.G.	H.G.
13.7	99.4	132.7	At2g28020	817346	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.7	99.4	40.3	At2g35190	818086	NPSN11 (NOVEL PLANT SNARE 11)	plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.	O.I.	C.G.	H.G.
13.6	99.4	696.9	At1g15930	838163	40S ribosomal protein S12 (RPS12A)	F:structural constituent of ribosome;P:response to cadmium ion, response to salt stress, translation;C:cytosolic small ribosomal subunit, cytosolic ribosome;MAOFP	O.I.	C.G.	H.G.
13.6	99.4	356.5	At3g14600	820688	60S ribosomal protein L18A (RPL18aC)	F:structural constituent of ribosome;P:N-terminal protein myristoylation, translation, ribosome biogenesis;C:cytosolic ribosome, cytosolic large ribosomal subunit, ribosome, membrane;MOFP	O.I.	C.G.	H.G.
13.3	99.4	140.2	At3g47836	823939	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.3	99.4	19.2	At4g01730	826911	zinc ion binding	F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP	O.I.	C.G.	H.G.
13.3	99.4	3.5	At2g04380	814977	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.1	99.4	63.7	At1g63050	842608	membrane bound O-acyl transferase (MBOAT) family protein	F:acyltransferase activity;P:biological_process unknown;C:endomembrane system, membrane;MFOBP	O.I.	C.G.	H.G.
13.1	99.4	14.3	At2g04500	814991	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;POM	O.I.	C.G.	H.G.
13.0	99.4	11.9	At1g64220	842727	TOM7-2 (TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2)	F:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:intracellular protein transport;C:mitochondrial outer membrane;P	O.I.	C.G.	H.G.
12.9	99.3	190.4	At2g31490	817707	unknown protein	F:molecular_function unknown;P:photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I;P	O.I.	C.G.	H.G.
12.9	99.3	91.2	At3g19910	821529	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
12.7	99.3	577.9	At5g27850	832848	60S ribosomal protein L18 (RPL18C)	F:structural constituent of ribosome;P:translation;C:cytosolic ribosome, cytosolic large ribosomal subunit, vacuole, large ribosomal subunit, membrane;MOFPA	O.I.	C.G.	H.G.
12.7	99.3	7.2	At3g49020	824063	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:nucleus;PM	O.I.	C.G.	H.G.
12.4	99.3	42.9	At4g15640	827241	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
12.0	99.3	51.8	At3g52420	824407	OEP7 (OUTER ENVELOPE MEMBRANE PROTEIN 7)	encodes a 7 kDa chloroplast outer envelope membrane protein.	O.I.	C.G.	H.G.
12.0	99.3	6.3	At2g18970	816414	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
11.8	99.3	434.6	At4g09800	826569	RPS18C (S18 RIBOSOMAL PROTEIN)	encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex	O.I.	C.G.	H.G.
11.7	99.3	321.0	At5g02450	831907	60S ribosomal protein L36 (RPL36C)	F:structural constituent of ribosome;P:translation;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MOFP	O.I.	C.G.	H.G.
11.7	99.3	30.7	At4g10620	826654	-	F:unknown;P:biological_process unknown;C:chloroplast;BMFOPA	O.I.	C.G.	H.G.
11.7	99.3	16.2	At2g30340	817584	LBD13 (LOB DOMAIN-CONTAINING PROTEIN 13)	F:molecular_function unknown;P:biological_process unknown;C:membrane;PMOFVBA	O.I.	C.G.	H.G.
11.7	99.3	3.3	At4g09930	826582	avirulence-responsive family protein / avirulence induced gene (AIG1) family protein	F:GTP binding;P:response to bacterium;C:cellular_component unknown;MOBPFVA	O.I.	C.G.	H.G.
11.6	99.3	670.3	At3g49010	824062	ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)	Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).	O.I.	C.G.	H.G.
11.6	99.3	24.6	At4g37090	829863	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA	O.I.	C.G.	H.G.
11.6	99.3	16.8	At1g06930	837204	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBV	O.I.	C.G.	H.G.
11.5	99.3	54.1	At5g09770	830837	ribosomal protein L17 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular;BOFMP	O.I.	C.G.	H.G.
11.5	99.3	17.0	At3g57360	824903	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MP	O.I.	C.G.	H.G.
11.5	99.3	10.4	At2g35460	818111	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	F:unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.2	99.2	61.2	At2g15000	815989	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
11.1	99.2	6.1	At4g21300	827878	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:unknown;C:unknown;POFMBA	O.I.	C.G.	H.G.
11.1	99.2	4.6	At1g44740	841038	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
11.1	99.2	3.7	At5g56070	835705	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
11.0	99.2	40.6	At2g19670	816486	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA	O.I.	C.G.	H.G.
11.0	99.2	12.2	At5g03770	831727	3-deoxy-D-manno-octulosonic acid transferase-related	F:transferase activity, transferring glycosyl groups;P:biosynthetic process, carbohydrate metabolic process;C:mitochondrion;OBP	O.I.	C.G.	H.G.
10.8	99.2	436.5	At3g56340	824801	40S ribosomal protein S26 (RPS26C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, membrane;MFOPA	O.I.	C.G.	H.G.
10.6	99.2	136.0	At1g80830	844422	NRAMP1 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1)	Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.	O.I.	C.G.	H.G.

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GSM ID	GSM252667
Assay name	Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep1
GSE experiment	GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Microarray experiments to specifically-expressed genes

GSM ID GSM252667 Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep1 GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

GSM ID GSM252667

Assay name Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 0 hrs Taking 70 mm of Stump (4dpg) rep1

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity