CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM252665

Assay name Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
93.8 99.9 39.3 At1g31760 840063 SWIB complex BAF60b domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOFMV O.I. C.G. H.G.
78.9 99.9 112.4 At1g14330 837994 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA O.I. C.G. H.G.
72.2 99.9 77.5 At5g48110 834863 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO O.I. C.G. H.G.
72.2 99.9 19.3 At3g27473 822369 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO O.I. C.G. H.G.
63.6 99.8 52.6 At1g33750 840266 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO O.I. C.G. H.G.
57.0 99.8 454.5 At3g03920 821062 Gar1 RNA-binding region family protein F:RNA binding, rRNA binding;P:rRNA processing;C:chloroplast thylakoid membrane, nucleolus;MPBOFVA O.I. C.G. H.G.
52.6 99.8 7.0 At2g22710 816801 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
48.7 99.8 30.1 At2g23050 816835 NPY4 (NAKED PINS IN YUC MUTANTS 4) A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. O.I. C.G. H.G.
40.8 99.8 92.4 At5g19520 832072 MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9) F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV O.I. C.G. H.G.
39.6 99.8 547.7 At4g10480 826640 nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV O.I. C.G. H.G.
38.9 99.8 41.7 At4g23750 828475 CRF2 (CYTOKININ RESPONSE FACTOR 2) encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
38.5 99.8 319.0 At3g16780 820931 60S ribosomal protein L19 (RPL19B) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MAOFP O.I. C.G. H.G.
38.0 99.8 97.1 At5g35940 833584 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM O.I. C.G. H.G.
37.1 99.7 211.6 At3g20000 821538 TOM40 Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore. O.I. C.G. H.G.
34.6 99.7 90.8 At1g31860 840076 AT-IE encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities. O.I. C.G. H.G.
33.6 99.7 128.9 At3g07030 3768790 nucleic acid binding F:nucleic acid binding;P:unknown;C:unknown O.I. C.G. H.G.
33.4 99.7 18.5 At5g01080 831873 beta-galactosidase F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P O.I. C.G. H.G.
33.0 99.7 40.9 At5g14690 831321 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PVM O.I. C.G. H.G.
32.5 99.7 257.6 At4g15770 827257 RNA binding / protein binding F:protein binding, RNA binding;P:ribosome assembly, ribosome biogenesis;C:nucleus;MFOPA O.I. C.G. H.G.
32.3 99.7 86.3 At5g20400 832162 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. O.I. C.G. H.G.
32.1 99.7 27.8 At4g00200 828162 DNA binding F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMBO O.I. C.G. H.G.
30.2 99.7 44.7 At3g12860 820468 nucleolar protein Nop56, putative F:unknown;P:biological_process unknown;C:unknown;MOFPBAV O.I. C.G. H.G.
29.8 99.7 169.4 At1g12910 837849 ATAN11 (ANTHOCYANIN11) Encodes a protein with similarity to the petunia WD repeat protein an11. O.I. C.G. H.G.
29.7 99.7 29.4 At5g57980 835909 RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C) NRPB5-like protein of unknown function; homologous to budding yeast RPB5 O.I. C.G. H.G.
29.3 99.7 35.9 At5g61880 836309 signaling molecule-related F:unknown;P:biological_process unknown;C:endomembrane system;MFPO O.I. C.G. H.G.
28.8 99.7 742.1 At3g16080 820853 60S ribosomal protein L37 (RPL37C) F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP O.I. C.G. H.G.
28.3 99.7 157.4 At5g16070 831464 chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
28.2 99.7 165.3 At1g52930 841726 brix domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
26.9 99.7 25.3 At5g60730 836194 anion-transporting ATPase family protein F:ATP binding;P:cellular metal ion homeostasis, anion transport;C:membrane;BOAMFP O.I. C.G. H.G.
26.7 99.7 27.5 At3g15240 820755 - - O.I. C.G. H.G.
26.5 99.7 33.4 At5g48940 834952 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
26.1 99.7 21.4 At1g15480 838118 DNA binding F:DNA binding;P:biological_process unknown;C:unknown;PMOFAB O.I. C.G. H.G.
26.0 99.7 12.2 At5g52170 835293 HDG7 (HOMEODOMAIN GLABROUS 7) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. O.I. C.G. H.G.
25.7 99.7 75.8 At5g14440 831295 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA O.I. C.G. H.G.
25.7 99.7 59.4 At3g12270 820407 PRMT3 (PROTEIN ARGININE METHYLTRANSFERASE 3) F:methyltransferase activity, zinc ion binding;P:metabolic process;C:intracellular;MBOFPA O.I. C.G. H.G.
25.1 99.6 308.0 At4g15910 827273 ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21) encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants. O.I. C.G. H.G.
25.1 99.6 71.4 At1g79150 844256 binding F:binding;P:biological_process unknown;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
25.0 99.6 289.0 At3g57150 824882 NAP57 (Arabidopsis thaliana homologue of NAP57) Encodes a putative pseudouridine synthase (NAP57). O.I. C.G. H.G.
25.0 99.6 229.4 At3g10610 820230 40S ribosomal protein S17 (RPS17C) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MOAFP O.I. C.G. H.G.
24.8 99.6 151.9 At5g54900 835581 ATRBP45A (RNA-binding protein 45A) F:RNA binding;P:unknown;C:unknown;MPFOBA O.I. C.G. H.G.
24.7 99.6 2.1 At1g56530 842106 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
24.1 99.6 783.5 At4g39200 830075 40S ribosomal protein S25 (RPS25E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MFPOA O.I. C.G. H.G.
23.8 99.6 9.0 At5g40320 834030 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;POM O.I. C.G. H.G.
22.6 99.6 28.6 At4g29430 829064 rps15ae (ribosomal protein S15A E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF O.I. C.G. H.G.
22.4 99.6 66.5 At5g27400 832799 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB O.I. C.G. H.G.
21.9 99.6 13.4 At1g03840 839396 MGP (Magpie) MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations. O.I. C.G. H.G.
21.5 99.6 90.6 At2g21060 816641 ATGRP2B (GLYCINE-RICH PROTEIN 2B) glycine-rich protein (AtGRP2b) O.I. C.G. H.G.
21.2 99.6 183.6 At1g02840 839262 SR1 SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF. O.I. C.G. H.G.
20.8 99.6 166.7 At1g52050 841634 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO O.I. C.G. H.G.
20.5 99.6 53.7 At5g12080 831081 MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10) F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:plasma membrane, membrane;BOFAP O.I. C.G. H.G.
20.4 99.6 40.7 At1g74490 843790 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
20.3 99.6 37.8 At3g26410 822245 methyltransferase/ nucleic acid binding F:methyltransferase activity, nucleic acid binding;P:methylation;C:endomembrane system;MAFOPB O.I. C.G. H.G.
20.3 99.6 28.9 At5g14750 831327 ATMYB66 (MYB DOMAIN PROTEIN 66) Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC). O.I. C.G. H.G.
20.2 99.6 23.5 At1g03760 839119 prefoldin subunit family protein F:unfolded protein binding;P:protein folding;C:prefoldin complex;MOPAFBV O.I. C.G. H.G.
20.0 99.6 128.5 At5g62340 836355 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
19.9 99.6 10.7 At5g15725 831428 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
19.7 99.6 31.0 At5g19300 832050 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBAV O.I. C.G. H.G.
19.3 99.6 538.4 At5g52470 835323 FIB1 (FIBRILLARIN 1) encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. O.I. C.G. H.G.
19.3 99.6 83.6 At2g18400 816355 ribosomal protein L6 family protein F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOFPMA O.I. C.G. H.G.
19.1 99.6 44.0 At3g21110 821663 PUR7 (PURIN 7) 5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone. O.I. C.G. H.G.
19.0 99.5 272.2 At1g24510 839066 T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:plasma membrane;BOMFPA O.I. C.G. H.G.
19.0 99.5 16.0 At4g10640 826656 IQD16 (IQ-domain 16) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
18.8 99.5 17.5 At3g62760 825451 ATGSTF13 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
18.4 99.5 28.9 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family O.I. C.G. H.G.
18.3 99.5 501.1 At1g48830 841305 40S ribosomal protein S7 (RPS7A) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast;MPOF O.I. C.G. H.G.
18.2 99.5 81.7 At1g72820 843613 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
17.9 99.5 73.4 At4g32910 829427 - F:unknown;P:biological_process unknown;C:cellular_component unknown;MPFO O.I. C.G. H.G.
17.8 99.5 3.3 At1g32000 840091 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
17.6 99.5 113.7 At2g25980 817139 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
17.6 99.5 41.9 At2g19385 816457 zinc ion binding F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPB O.I. C.G. H.G.
17.5 99.5 46.6 At1g63470 842653 DNA-binding family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFBO O.I. C.G. H.G.
17.4 99.5 40.2 At2g28450 817393 zinc finger (CCCH-type) family protein F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV O.I. C.G. H.G.
17.4 99.5 36.4 At1g03110 839572 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MBFOPA O.I. C.G. H.G.
17.2 99.5 29.6 At3g03170 821064 unknown protein F:unknown;P:unknown;C:cellular_component unknown;P O.I. C.G. H.G.
16.9 99.5 36.5 At1g72730 843605 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:cytosol, plasma membrane, plant-type cell wall;BOMFPAV O.I. C.G. H.G.
16.8 99.5 24.6 At1g14060 837966 - F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOPFBV O.I. C.G. H.G.
16.6 99.5 87.3 At2g40430 818636 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB O.I. C.G. H.G.
16.6 99.5 58.4 At5g57090 835813 EIR1 (ETHYLENE INSENSITIVE ROOT 1) Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity. O.I. C.G. H.G.
16.4 99.5 136.0 At4g38680 830024 GRP2 (GLYCINE RICH PROTEIN 2) Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development. O.I. C.G. H.G.
16.3 99.5 443.0 At1g48630 841284 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B) Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C. O.I. C.G. H.G.
16.3 99.5 25.0 At1g69600 843296 ZFHD1 (ZINC FINGER HOMEODOMAIN 1) Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid. O.I. C.G. H.G.
16.0 99.5 34.5 At4g28830 829004 methyltransferase/ nucleic acid binding F:methyltransferase activity, nucleic acid binding;P:methylation;C:cellular_component unknown;BOAMPF O.I. C.G. H.G.
15.9 99.5 32.2 At3g11520 820325 CYCB1 Encodes a B-type mitotic cyclin. O.I. C.G. H.G.
15.8 99.5 30.2 At3g43240 823399 ARID/BRIGHT DNA-binding domain-containing protein F:protein binding, DNA binding, zinc ion binding;P:unknown;C:intracellular;PMFO O.I. C.G. H.G.
15.7 99.5 25.8 At1g62150 842511 mitochondrial transcription termination factor-related / mTERF-related F:molecular_function unknown;P:unknown;C:unknown;POM O.I. C.G. H.G.
15.6 99.5 48.8 At5g45600 834599 GAS41 The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man. O.I. C.G. H.G.
15.4 99.5 47.9 At2g19670 816486 PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A) F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA O.I. C.G. H.G.
15.3 99.4 85.4 At4g31120 829240 SKB1 (SHK1 BINDING PROTEIN 1) Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification. O.I. C.G. H.G.
15.2 99.4 46.8 At2g43780 818981 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
14.9 99.4 21.6 At3g02320 820451 RNA binding / tRNA (guanine-N2-)-methyltransferase F:RNA binding, tRNA (guanine-N2-)-methyltransferase activity;P:tRNA processing;C:cellular_component unknown;OMAFBP O.I. C.G. H.G.
14.7 99.4 160.6 At1g52070 841636 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB O.I. C.G. H.G.
14.7 99.4 21.3 At1g80370 844377 CYCA2 F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus, chloroplast;MPOFVB O.I. C.G. H.G.
14.6 99.4 168.6 At1g49760 841399 PAB8 (POLY(A) BINDING PROTEIN 8) polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family. O.I. C.G. H.G.
14.5 99.4 154.5 At5g35620 833534 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection. O.I. C.G. H.G.
14.5 99.4 34.2 At4g10620 826654 - F:unknown;P:biological_process unknown;C:chloroplast;BMFOPA O.I. C.G. H.G.
14.4 99.4 332.3 At5g64140 836535 RPS28 (RIBOSOMAL PROTEIN S28) Encodes a putative ribosomal protein S28. O.I. C.G. H.G.
14.4 99.4 81.8 At4g34265 829576 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
14.1 99.4 134.6 At2g28020 817346 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
14.1 99.4 10.3 At1g72840 843615 ATP binding / protein binding / transmembrane receptor F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA O.I. C.G. H.G.
14.0 99.4 45.7 At5g57120 835816 - F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOBFPVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
93.8	99.9	39.3	At1g31760	840063	SWIB complex BAF60b domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOFMV	O.I.	C.G.	H.G.
78.9	99.9	112.4	At1g14330	837994	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA	O.I.	C.G.	H.G.
72.2	99.9	77.5	At5g48110	834863	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PMO	O.I.	C.G.	H.G.
72.2	99.9	19.3	At3g27473	822369	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO	O.I.	C.G.	H.G.
63.6	99.8	52.6	At1g33750	840266	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PO	O.I.	C.G.	H.G.
57.0	99.8	454.5	At3g03920	821062	Gar1 RNA-binding region family protein	F:RNA binding, rRNA binding;P:rRNA processing;C:chloroplast thylakoid membrane, nucleolus;MPBOFVA	O.I.	C.G.	H.G.
52.6	99.8	7.0	At2g22710	816801	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
48.7	99.8	30.1	At2g23050	816835	NPY4 (NAKED PINS IN YUC MUTANTS 4)	A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.	O.I.	C.G.	H.G.
40.8	99.8	92.4	At5g19520	832072	MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9)	F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV	O.I.	C.G.	H.G.
39.6	99.8	547.7	At4g10480	826640	nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putative	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPABV	O.I.	C.G.	H.G.
38.9	99.8	41.7	At4g23750	828475	CRF2 (CYTOKININ RESPONSE FACTOR 2)	encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
38.5	99.8	319.0	At3g16780	820931	60S ribosomal protein L19 (RPL19B)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome, plasma membrane;MAOFP	O.I.	C.G.	H.G.
38.0	99.8	97.1	At5g35940	833584	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBM	O.I.	C.G.	H.G.
37.1	99.7	211.6	At3g20000	821538	TOM40	Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore.	O.I.	C.G.	H.G.
34.6	99.7	90.8	At1g31860	840076	AT-IE	encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.	O.I.	C.G.	H.G.
33.6	99.7	128.9	At3g07030	3768790	nucleic acid binding	F:nucleic acid binding;P:unknown;C:unknown	O.I.	C.G.	H.G.
33.4	99.7	18.5	At5g01080	831873	beta-galactosidase	F:beta-galactosidase activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;P	O.I.	C.G.	H.G.
33.0	99.7	40.9	At5g14690	831321	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PVM	O.I.	C.G.	H.G.
32.5	99.7	257.6	At4g15770	827257	RNA binding / protein binding	F:protein binding, RNA binding;P:ribosome assembly, ribosome biogenesis;C:nucleus;MFOPA	O.I.	C.G.	H.G.
32.3	99.7	86.3	At5g20400	832162	oxidoreductase, 2OG-Fe(II) oxygenase family protein	encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.	O.I.	C.G.	H.G.
32.1	99.7	27.8	At4g00200	828162	DNA binding	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMBO	O.I.	C.G.	H.G.
30.2	99.7	44.7	At3g12860	820468	nucleolar protein Nop56, putative	F:unknown;P:biological_process unknown;C:unknown;MOFPBAV	O.I.	C.G.	H.G.
29.8	99.7	169.4	At1g12910	837849	ATAN11 (ANTHOCYANIN11)	Encodes a protein with similarity to the petunia WD repeat protein an11.	O.I.	C.G.	H.G.
29.7	99.7	29.4	At5g57980	835909	RPB5C (RNA POLYMERASE II FIFTH LARGEST SUBUNIT, C)	NRPB5-like protein of unknown function; homologous to budding yeast RPB5	O.I.	C.G.	H.G.
29.3	99.7	35.9	At5g61880	836309	signaling molecule-related	F:unknown;P:biological_process unknown;C:endomembrane system;MFPO	O.I.	C.G.	H.G.
28.8	99.7	742.1	At3g16080	820853	60S ribosomal protein L37 (RPL37C)	F:structural constituent of ribosome;P:translation, ribosome biogenesis;C:cytosolic large ribosomal subunit, ribosome;MAOFP	O.I.	C.G.	H.G.
28.3	99.7	157.4	At5g16070	831464	chaperonin, putative	F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
28.2	99.7	165.3	At1g52930	841726	brix domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
26.9	99.7	25.3	At5g60730	836194	anion-transporting ATPase family protein	F:ATP binding;P:cellular metal ion homeostasis, anion transport;C:membrane;BOAMFP	O.I.	C.G.	H.G.
26.7	99.7	27.5	At3g15240	820755	-	-	O.I.	C.G.	H.G.
26.5	99.7	33.4	At5g48940	834952	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
26.1	99.7	21.4	At1g15480	838118	DNA binding	F:DNA binding;P:biological_process unknown;C:unknown;PMOFAB	O.I.	C.G.	H.G.
26.0	99.7	12.2	At5g52170	835293	HDG7 (HOMEODOMAIN GLABROUS 7)	Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.	O.I.	C.G.	H.G.
25.7	99.7	75.8	At5g14440	831295	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA	O.I.	C.G.	H.G.
25.7	99.7	59.4	At3g12270	820407	PRMT3 (PROTEIN ARGININE METHYLTRANSFERASE 3)	F:methyltransferase activity, zinc ion binding;P:metabolic process;C:intracellular;MBOFPA	O.I.	C.G.	H.G.
25.1	99.6	308.0	At4g15910	827273	ATDI21 (ARABIDOPSIS THALIANA DROUGHT-INDUCED 21)	encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.	O.I.	C.G.	H.G.
25.1	99.6	71.4	At1g79150	844256	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
25.0	99.6	289.0	At3g57150	824882	NAP57 (Arabidopsis thaliana homologue of NAP57)	Encodes a putative pseudouridine synthase (NAP57).	O.I.	C.G.	H.G.
25.0	99.6	229.4	At3g10610	820230	40S ribosomal protein S17 (RPS17C)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MOAFP	O.I.	C.G.	H.G.
24.8	99.6	151.9	At5g54900	835581	ATRBP45A (RNA-binding protein 45A)	F:RNA binding;P:unknown;C:unknown;MPFOBA	O.I.	C.G.	H.G.
24.7	99.6	2.1	At1g56530	842106	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
24.1	99.6	783.5	At4g39200	830075	40S ribosomal protein S25 (RPS25E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome;MFPOA	O.I.	C.G.	H.G.
23.8	99.6	9.0	At5g40320	834030	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
22.6	99.6	28.6	At4g29430	829064	rps15ae (ribosomal protein S15A E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF	O.I.	C.G.	H.G.
22.4	99.6	66.5	At5g27400	832799	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOB	O.I.	C.G.	H.G.
21.9	99.6	13.4	At1g03840	839396	MGP (Magpie)	MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.	O.I.	C.G.	H.G.
21.5	99.6	90.6	At2g21060	816641	ATGRP2B (GLYCINE-RICH PROTEIN 2B)	glycine-rich protein (AtGRP2b)	O.I.	C.G.	H.G.
21.2	99.6	183.6	At1g02840	839262	SR1	SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF.	O.I.	C.G.	H.G.
20.8	99.6	166.7	At1g52050	841634	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO	O.I.	C.G.	H.G.
20.5	99.6	53.7	At5g12080	831081	MSL10 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10)	F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:plasma membrane, membrane;BOFAP	O.I.	C.G.	H.G.
20.4	99.6	40.7	At1g74490	843790	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
20.3	99.6	37.8	At3g26410	822245	methyltransferase/ nucleic acid binding	F:methyltransferase activity, nucleic acid binding;P:methylation;C:endomembrane system;MAFOPB	O.I.	C.G.	H.G.
20.3	99.6	28.9	At5g14750	831327	ATMYB66 (MYB DOMAIN PROTEIN 66)	Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC).	O.I.	C.G.	H.G.
20.2	99.6	23.5	At1g03760	839119	prefoldin subunit family protein	F:unfolded protein binding;P:protein folding;C:prefoldin complex;MOPAFBV	O.I.	C.G.	H.G.
20.0	99.6	128.5	At5g62340	836355	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
19.9	99.6	10.7	At5g15725	831428	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
19.7	99.6	31.0	At5g19300	832050	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBAV	O.I.	C.G.	H.G.
19.3	99.6	538.4	At5g52470	835323	FIB1 (FIBRILLARIN 1)	encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.	O.I.	C.G.	H.G.
19.3	99.6	83.6	At2g18400	816355	ribosomal protein L6 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOFPMA	O.I.	C.G.	H.G.
19.1	99.6	44.0	At3g21110	821663	PUR7 (PURIN 7)	5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.	O.I.	C.G.	H.G.
19.0	99.5	272.2	At1g24510	839066	T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putative	F:unfolded protein binding, protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:plasma membrane;BOMFPA	O.I.	C.G.	H.G.
19.0	99.5	16.0	At4g10640	826656	IQD16 (IQ-domain 16)	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
18.8	99.5	17.5	At3g62760	825451	ATGSTF13	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
18.4	99.5	28.9	At2g14100	815896	CYP705A13	a member of the cytochrome P450 family	O.I.	C.G.	H.G.
18.3	99.5	501.1	At1g48830	841305	40S ribosomal protein S7 (RPS7A)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, cell wall, plasma membrane, chloroplast;MPOF	O.I.	C.G.	H.G.
18.2	99.5	81.7	At1g72820	843613	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
17.9	99.5	73.4	At4g32910	829427	-	F:unknown;P:biological_process unknown;C:cellular_component unknown;MPFO	O.I.	C.G.	H.G.
17.8	99.5	3.3	At1g32000	840091	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
17.6	99.5	113.7	At2g25980	817139	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
17.6	99.5	41.9	At2g19385	816457	zinc ion binding	F:zinc ion binding;P:biological_process unknown;C:intracellular;MOFPB	O.I.	C.G.	H.G.
17.5	99.5	46.6	At1g63470	842653	DNA-binding family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;PMFBO	O.I.	C.G.	H.G.
17.4	99.5	40.2	At2g28450	817393	zinc finger (CCCH-type) family protein	F:methyltransferase activity, zinc ion binding, RNA methyltransferase activity, nucleic acid binding;P:acetate biosynthetic process from carbon monoxide, methanol oxidation, RNA processing;C:cellular_component unknown;BOMFAPV	O.I.	C.G.	H.G.
17.4	99.5	36.4	At1g03110	839572	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:cellular_component unknown;MBFOPA	O.I.	C.G.	H.G.
17.2	99.5	29.6	At3g03170	821064	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
16.9	99.5	36.5	At1g72730	843605	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative	F:helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding;P:biological_process unknown;C:cytosol, plasma membrane, plant-type cell wall;BOMFPAV	O.I.	C.G.	H.G.
16.8	99.5	24.6	At1g14060	837966	-	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOPFBV	O.I.	C.G.	H.G.
16.6	99.5	87.3	At2g40430	818636	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB	O.I.	C.G.	H.G.
16.6	99.5	58.4	At5g57090	835813	EIR1 (ETHYLENE INSENSITIVE ROOT 1)	Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.	O.I.	C.G.	H.G.
16.4	99.5	136.0	At4g38680	830024	GRP2 (GLYCINE RICH PROTEIN 2)	Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.	O.I.	C.G.	H.G.
16.3	99.5	443.0	At1g48630	841284	RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)	Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.	O.I.	C.G.	H.G.
16.3	99.5	25.0	At1g69600	843296	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.	O.I.	C.G.	H.G.
16.0	99.5	34.5	At4g28830	829004	methyltransferase/ nucleic acid binding	F:methyltransferase activity, nucleic acid binding;P:methylation;C:cellular_component unknown;BOAMPF	O.I.	C.G.	H.G.
15.9	99.5	32.2	At3g11520	820325	CYCB1	Encodes a B-type mitotic cyclin.	O.I.	C.G.	H.G.
15.8	99.5	30.2	At3g43240	823399	ARID/BRIGHT DNA-binding domain-containing protein	F:protein binding, DNA binding, zinc ion binding;P:unknown;C:intracellular;PMFO	O.I.	C.G.	H.G.
15.7	99.5	25.8	At1g62150	842511	mitochondrial transcription termination factor-related / mTERF-related	F:molecular_function unknown;P:unknown;C:unknown;POM	O.I.	C.G.	H.G.
15.6	99.5	48.8	At5g45600	834599	GAS41	The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. In addition to Arabidopsis, GSA41 is found in Drosophila, C.elegans, yeast and man.	O.I.	C.G.	H.G.
15.4	99.5	47.9	At2g19670	816486	PRMT1A (PROTEIN ARGININE METHYLTRANSFERASE 1A)	F:protein-arginine N-methyltransferase activity;P:unknown;C:unknown;MBOPFA	O.I.	C.G.	H.G.
15.3	99.4	85.4	At4g31120	829240	SKB1 (SHK1 BINDING PROTEIN 1)	Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.	O.I.	C.G.	H.G.
15.2	99.4	46.8	At2g43780	818981	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
14.9	99.4	21.6	At3g02320	820451	RNA binding / tRNA (guanine-N2-)-methyltransferase	F:RNA binding, tRNA (guanine-N2-)-methyltransferase activity;P:tRNA processing;C:cellular_component unknown;OMAFBP	O.I.	C.G.	H.G.
14.7	99.4	160.6	At1g52070	841636	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB	O.I.	C.G.	H.G.
14.7	99.4	21.3	At1g80370	844377	CYCA2	F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus, chloroplast;MPOFVB	O.I.	C.G.	H.G.
14.6	99.4	168.6	At1g49760	841399	PAB8 (POLY(A) BINDING PROTEIN 8)	polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.	O.I.	C.G.	H.G.
14.5	99.4	154.5	At5g35620	833534	LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)	Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.	O.I.	C.G.	H.G.
14.5	99.4	34.2	At4g10620	826654	-	F:unknown;P:biological_process unknown;C:chloroplast;BMFOPA	O.I.	C.G.	H.G.
14.4	99.4	332.3	At5g64140	836535	RPS28 (RIBOSOMAL PROTEIN S28)	Encodes a putative ribosomal protein S28.	O.I.	C.G.	H.G.
14.4	99.4	81.8	At4g34265	829576	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
14.1	99.4	134.6	At2g28020	817346	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.1	99.4	10.3	At1g72840	843615	ATP binding / protein binding / transmembrane receptor	F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA	O.I.	C.G.	H.G.
14.0	99.4	45.7	At5g57120	835816	-	F:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOBFPVA	O.I.	C.G.	H.G.

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GSM ID	GSM252665
Assay name	Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3
GSE experiment	GSE9996: Organ regeneration in plants is independent of stem cell niche activity

Microarray experiments to specifically-expressed genes

GSM ID GSM252665 Assay name Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3 GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity

GSM ID GSM252665

Assay name Arabidopsis Root from tip to 130 mm proximal to tip (cut 4dpg) rep3

GSE experiment GSE9996: Organ regeneration in plants is independent of stem cell niche activity