Microarray experiments to specifically-expressed genes

GSM ID GSM245918
Assay name wild type dark replicate 3
GSE experiment GSE9728: COP9 signalosome (csn) mutant analysis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
54.599.8184.6At5g02020831782unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
47.599.8443.4At1g60740842368peroxiredoxin type 2, putativeF:oxidoreductase activity, antioxidant activity;P:cell redox homeostasis;C:plasma membrane;OBFPMAO.I.C.G.H.G.
45.699.8239.5At5g54080835494HGO (HOMOGENTISATE 1,2-DIOXYGENASE)homogentisate 1,2-dioxygenaseO.I.C.G.H.G.
40.199.8303.5At1g19530838540unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PO.I.C.G.H.G.
36.199.750.1At5g02580831095unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
34.299.7213.3At3g60140825184DIN2 (DARK INDUCIBLE 2)Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
26.999.7181.0At1g09570837483PHYA (PHYTOCHROME A)Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.O.I.C.G.H.G.
24.899.6183.2At1g73120843643unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:unknown;PO.I.C.G.H.G.
24.699.6160.3At1g12080837760unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
23.499.6102.8At1g26665839207-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
22.599.661.4At1g76410843974ATL8F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVO.I.C.G.H.G.
21.699.6201.9At5g03240831899UBQ3 (POLYUBIQUITIN 3)encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.O.I.C.G.H.G.
20.499.6147.2At2g18280816344AtTLP2 (TUBBY LIKE PROTEIN 2)Member of TLP familyO.I.C.G.H.G.
20.299.6108.9At2g22860816817ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.O.I.C.G.H.G.
19.999.6189.3At2g37750818352unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
19.399.698.2At1g67910843119unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
18.799.557.0At1g02340839300HFR1 (LONG HYPOCOTYL IN FAR-RED)Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1.O.I.C.G.H.G.
18.699.521.9At1g67110843031CYP735A2member of CYP709AO.I.C.G.H.G.
18.399.5229.9At2g39310818516JAL22 (JACALIN-RELATED LECTIN 22)F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
18.199.5194.2At5g18650831983zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;MPOFAO.I.C.G.H.G.
17.899.5262.0At4g14130827051XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)xyloglucan endotransglycosylase-related protein (XTR7)O.I.C.G.H.G.
17.299.585.7At2g18050816317HIS1-3 (HISTONE H1-3)encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.O.I.C.G.H.G.
16.699.5212.2At1g28330839729DYL1 (DORMANCY-ASSOCIATED PROTEIN-LIKE 1)dormancy-associated protein (DRM1)O.I.C.G.H.G.
16.699.5133.4At1g10070837543ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2)Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.O.I.C.G.H.G.
16.699.565.1At1g214008387392-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putativeF:oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor, 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity;P:metabolic process;C:unknown;BOMFPAO.I.C.G.H.G.
16.299.5797.2At2g38530818435LTP2 (LIPID TRANSFER PROTEIN 2)Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.O.I.C.G.H.G.
15.999.5140.1At1g06570837168PDS1 (PHYTOENE DESATURATION 1)Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.O.I.C.G.H.G.
15.999.5103.0At5g43580834378serine-type endopeptidase inhibitorPredicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.O.I.C.G.H.G.
15.999.523.7At1g72070843538DNAJ heat shock N-terminal domain-containing proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMPFAVO.I.C.G.H.G.
15.899.533.2At4g23870828486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
15.799.5198.6At3g01520821122universal stress protein (USP) family proteinF:molecular_function unknown;P:N-terminal protein myristoylation, response to stress;C:plasma membrane;BPAMOFO.I.C.G.H.G.
15.799.5130.2At1g03090838362MCCAMCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.O.I.C.G.H.G.
15.599.560.6At4g04620825794ATG8B (autophagy 8b)F:microtubule binding;P:autophagy;C:unknown;MOPFVO.I.C.G.H.G.
15.399.4165.6At3g49780824140ATPSK4 (PHYTOSULFOKINE 4 PRECURSOR)Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.O.I.C.G.H.G.
15.299.4198.4At1g58030842170CAT2 (CATIONIC AMINO ACID TRANSPORTER 2)Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.O.I.C.G.H.G.
15.299.4135.2At5g49450835005AtbZIP1 (Arabidopsis thaliana basic leucine-zipper 1)F:transcription factor activity, protein heterodimerization activity, DNA binding;P:anther dehiscence, regulation of transcription, DNA-dependent;C:nucleus, chloroplast;PMOO.I.C.G.H.G.
15.199.444.4At2g39705818554RTFL8 (ROTUNDIFOLIA LIKE 8)F:molecular_function unknown;P:shoot development;C:chloroplast;PO.I.C.G.H.G.
14.399.4122.8At4g33150829452lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymeF:unknown;P:unknown;C:unknown;OBFMPAO.I.C.G.H.G.
13.899.4105.9At5g06370830525NC domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PBMOO.I.C.G.H.G.
13.699.4625.2At5g15230831375GASA4 (GAST1 PROTEIN HOMOLOG 4)gibberellin-regulated (GASA4)O.I.C.G.H.G.
13.699.4445.7At4g35770829730SEN1 (SENESCENCE 1)Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.O.I.C.G.H.G.
13.599.438.8At3g20340821578-Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.O.I.C.G.H.G.
13.499.4293.0At2g37130818289peroxidase 21 (PER21) (P21) (PRXR5)F:electron carrier activity, peroxidase activity, heme binding;P:defense response to fungus;C:endomembrane system;PFOO.I.C.G.H.G.
12.999.392.4At4g17730827494SYP23 (SYNTAXIN OF PLANTS 23)member of SYP2 Gene FamilyO.I.C.G.H.G.
12.599.372.1At1g80160844356lactoylglutathione lyase family protein / glyoxalase I family proteinF:lactoylglutathione lyase activity;P:carbohydrate metabolic process;C:unknown;BPOO.I.C.G.H.G.
12.299.3249.3At3g47340823888ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.O.I.C.G.H.G.
12.199.359.8At2g42890818890AML2 (ARABIDOPSIS-MEI2-LIKE 2)A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.O.I.C.G.H.G.
12.099.3394.2At3g16770820929ATEBP (ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN)Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.O.I.C.G.H.G.
12.099.3108.1At4g34030829549MCCB (3-METHYLCROTONYL-COA CARBOXYLASE)MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not.O.I.C.G.H.G.
11.899.360.8At2g45620819170nucleotidyltransferase family proteinF:nucleotidyltransferase activity;P:biological_process unknown;C:cellular_component unknown;MOFPBO.I.C.G.H.G.
11.799.372.5At4g11190826721disease resistance-responsive family protein / dirigent family proteinF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;PO.I.C.G.H.G.
11.799.311.6At3g29370822596unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.699.3191.1At1g12780837834UGE1 (UDP-D-glucose/UDP-D-galactose 4-epimerase 1)Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.O.I.C.G.H.G.
11.699.328.8At1g23120838920major latex protein-related / MLP-relatedF:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
11.599.330.4At5g04080830287unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFO.I.C.G.H.G.
11.399.3118.8At2g38400818421AGT3 (ALANINE:GLYOXYLATE AMINOTRANSFERASE 3)alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,O.I.C.G.H.G.
11.299.2658.0At1g31812840069ACBP6 (acyl-CoA-binding protein 6)Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.O.I.C.G.H.G.
11.299.2572.9At2g33830817950dormancy/auxin associated family proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
11.299.2285.7At2g05540815103glycine-rich proteinF:unknown;P:unknown;C:endomembrane system;MPBOFVAO.I.C.G.H.G.
11.299.2128.7At1g21770838781-F:molecular_function unknown;P:biological_process unknown;C:peroxisome;BPOAMO.I.C.G.H.G.
11.099.2117.6At4g09830826572-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
10.999.2180.0At4g37300829885MEE59 (maternal effect embryo arrest 59)F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:cellular_component unknown;PO.I.C.G.H.G.
10.899.223.6At4g29380829059protein kinase family protein / WD-40 repeat family proteinF:protein serine/threonine kinase activity, binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:CUL4 RING ubiquitin ligase complex;MOFPBVAO.I.C.G.H.G.
10.799.2264.0At4g11650826770ATOSM34 (osmotin 34)osmotin-like proteinO.I.C.G.H.G.
10.799.2185.2At5g63600836480FLS5 (FLAVONOL SYNTHASE 5)encodes a protein whose sequence is similar to flavonol synthaseO.I.C.G.H.G.
10.799.2172.2At3g62650825439unknown proteinF:unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
10.699.2263.7At4g12550826868AIR1isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.O.I.C.G.H.G.
10.699.225.4At5g57240835830ORP4C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 4C)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOPO.I.C.G.H.G.
10.499.210.1At3g55790824745unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPBOFVO.I.C.G.H.G.
10.399.2276.2At3g55770824743LIM domain-containing proteinF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.C.G.H.G.
10.399.2173.8At3g01470821138ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.O.I.C.G.H.G.
10.399.2130.5At5g63190836440MA3 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
10.399.270.6At1g10140837551-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POO.I.C.G.H.G.
10.399.244.2At3g04350819590unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMBOO.I.C.G.H.G.
10.299.2187.3At5g16110831468unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
10.299.217.1At1g54680841909unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBOO.I.C.G.H.G.
10.199.2137.2At1g16240838193SYP51 (SYNTAXIN OF PLANTS 51)Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed.O.I.C.G.H.G.
10.199.2114.8At1g29970839876RPL18AA (60S RIBOSOMAL PROTEIN L18A-1)F:unknown;P:unknown;C:unknown;PO.I.C.G.H.G.
10.199.231.8At1g05890837099zinc finger protein-relatedF:protein binding, zinc ion binding, nucleic acid binding;P:unknown;C:unknown;MOFPVO.I.C.G.H.G.
10.199.28.5At2g46990819313IAA20 (INDOLE-3-ACETIC ACID INDUCIBLE 20)Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA20 lacks the conserved degron (domain II) found in many family members, and IAA20 fusion proteins are stable in Arabidopsis seedlings. IAA20 transcripts are induced by auxin treatment, and overexpression of IAA20 leads to defects in gravitropism, root development, root meristem maintenance, etiolation, and cotyledon vascular development.O.I.C.G.H.G.
10.099.228.3At5g05710830455pleckstrin homology (PH) domain-containing proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;MOPFVO.I.C.G.H.G.
9.899.1227.3At2g01530814682MLP329 (MLP-LIKE PROTEIN 329)F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
9.599.1340.9At3g16390820886NSP3 (NITRILE SPECIFIER PROTEIN 3)Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.O.I.C.G.H.G.
9.599.148.5At1g78290844164--O.I.C.G.H.G.
9.499.1288.2At3g16450820893jacalin lectin family proteinF:molecular_function unknown;P:response to cold;C:nucleus;POO.I.C.G.H.G.
9.499.178.8At1g64660842774ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.O.I.C.G.H.G.
9.399.1404.4At5g41700834173UBC8 (UBIQUITIN CONJUGATING ENZYME 8)One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2O.I.C.G.H.G.
9.399.1274.0At5g49360834996BXL1 (BETA-XYLOSIDASE 1)Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.O.I.C.G.H.G.
9.399.143.1At1g23870838998ATTPS9Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.O.I.C.G.H.G.
9.199.171.6At1g07040837215unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;BOPO.I.C.G.H.G.
9.199.149.5At3g24100821996-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPFOO.I.C.G.H.G.
9.099.1229.5At3g48740824035nodulin MtN3 family proteinF:unknown;P:biological_process unknown;C:endomembrane system, integral to membrane, membrane;PMOBO.I.C.G.H.G.
8.999.0153.4At2g36320818205zinc finger (AN1-like) family proteinF:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVFO.I.C.G.H.G.
8.999.021.8At4g35720829724unknown proteinF:unknown;P:unknown;C:unknown;POO.I.C.G.H.G.
8.899.0257.4At3g29240822579unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid lumen, chloroplast;BOPO.I.C.G.H.G.
8.899.0158.3At1g80440844383kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPBOFAO.I.C.G.H.G.
8.899.025.1At5g18640831982lipase class 3 family proteinF:triacylglycerol lipase activity;P:lipid metabolic process;C:endomembrane system;POFBMVO.I.C.G.H.G.
8.799.0130.8At4g32150829347ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711)AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.O.I.C.G.H.G.
8.799.0126.3At4g39675830122unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
8.799.0118.1At1g28580839758GDSL-motif lipase, putativeF:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuole;PBOFMO.I.C.G.H.G.



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