CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM242960

Assay name Steroid day 3 (day3D2)

GSE experiment GSE9605: Target genes of AGAMOUS during early flower development in Arabidopsis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
559.9 100.0 278.6 At4g35190 829672 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAM O.I. C.G. H.G.
551.1 100.0 108.2 At5g03840 831683 TFL1 (TERMINAL FLOWER 1) Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole. O.I. C.G. H.G.
374.1 100.0 58.7 At4g31610 829288 REM1 (REPRODUCTIVE MERISTEM 1) Expressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins O.I. C.G. H.G.
351.9 100.0 212.2 At5g67110 836846 ALC (ALCATRAZ) encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce. O.I. C.G. H.G.
337.4 100.0 49.2 At3g20900 821639 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
268.3 100.0 142.6 At3g61250 825297 AtMYB17 (myb domain protein 17) Member of the R2R3 factor gene family. O.I. C.G. H.G.
242.7 100.0 53.7 At5g51870 835262 AGL71 (AGAMOUS-LIKE 71) F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBA O.I. C.G. H.G.
210.8 100.0 110.9 At1g23000 838908 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OPMFB O.I. C.G. H.G.
190.9 100.0 87.9 At2g18550 816370 HB-2 (HOMEOBOX-2) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
176.8 100.0 31.1 At2g06200 815176 AtGRF6 (GROWTH-REGULATING FACTOR 6) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower O.I. C.G. H.G.
176.4 100.0 30.3 At2g39680 - - O.I. C.G. H.G.
155.8 99.9 168.6 At3g55110 824677 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV O.I. C.G. H.G.
149.0 99.9 32.6 At3g13130 820501 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFB O.I. C.G. H.G.
137.6 99.9 267.6 At1g22160 838821 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
115.4 99.9 91.7 At1g60890 842381 phosphatidylinositol-4-phosphate 5-kinase family protein F:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:plasma membrane;OMBPF O.I. C.G. H.G.
115.3 99.9 114.1 At4g30520 829175 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
113.3 99.9 46.4 At2g02540 814784 ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21) Zinc finger homeobox protein. Expressed in vascular tissue. In a yeast one hybrid system was not able to transactivate a reporter gene. O.I. C.G. H.G.
112.7 99.9 173.6 At1g80050 844345 APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2) Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol. O.I. C.G. H.G.
107.4 99.9 143.3 At5g60910 836212 AGL8 (agamous-like 8) MADS box gene negatively regulated by APETALA1 O.I. C.G. H.G.
106.6 99.9 5.4 At2g30925 817643 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
101.8 99.9 99.7 At3g02210 821245 COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
98.6 99.9 62.2 At5g62165 836337 AGL42 (AGAMOUS LIKE 42) Encodes a MADS box transcription factor. Expressed in quiescent center. O.I. C.G. H.G.
92.5 99.9 46.2 At5g07800 830673 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA O.I. C.G. H.G.
90.9 99.9 49.0 At3g25620 822149 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:chloroplast;BOMFAPV O.I. C.G. H.G.
89.3 99.9 167.8 At1g69700 843306 ATHVA22C Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. O.I. C.G. H.G.
87.4 99.9 99.9 At4g13640 826998 UNE16 (unfertilized embryo sac 16) F:transcription factor activity;P:double fertilization forming a zygote and endosperm;C:unknown;POBM O.I. C.G. H.G.
87.1 99.9 562.9 At1g70160 843352 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
84.1 99.9 22.8 At5g20420 832164 CHR42 (chromatin remodeling 42) F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPAV O.I. C.G. H.G.
78.7 99.9 28.4 At3g59270 825096 syntaxin-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
77.3 99.9 31.4 At3g24560 822052 RSY3 (RASPBERRY 3) novel gene involved in embryogenesis O.I. C.G. H.G.
76.3 99.9 313.9 At2g26330 817173 ER (ERECTA) Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. O.I. C.G. H.G.
75.8 99.9 24.7 At2g27220 817264 BLH5 (BELL1-like homeodomain 5) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
72.8 99.9 147.4 At5g44630 834491 terpene synthase/cyclase family protein Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries. O.I. C.G. H.G.
72.3 99.9 35.2 At5g40280 834026 ERA1 (ENHANCED RESPONSE TO ABA 1) encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought. O.I. C.G. H.G.
71.2 99.9 15.8 At1g26530 839193 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
68.8 99.9 33.4 At2g01940 814725 nucleic acid binding / transcription factor/ zinc ion binding May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells. O.I. C.G. H.G.
68.0 99.9 150.2 At5g44620 834490 CYP706A3 member of CYP706A O.I. C.G. H.G.
65.0 99.8 12.2 At2g35870 - - O.I. C.G. H.G.
64.6 99.8 52.1 At4g16447 827342 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
63.7 99.8 121.3 At4g31910 829321 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:nucleus;PFBO O.I. C.G. H.G.
63.3 99.8 21.0 At3g09910 820149 ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B) F:GTP binding, transcription factor binding, ATP binding;P:protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent;C:endomembrane system, intracellular;MOFPBVA O.I. C.G. H.G.
62.0 99.8 47.9 At2g16270 816123 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVA O.I. C.G. H.G.
60.6 99.8 42.8 At3g14980 820727 PHD finger transcription factor, putative F:protein binding, DNA binding, zinc ion binding, N-acetyltransferase activity;P:regulation of transcription, DNA-dependent, metabolic process;C:nucleus;MPFOBA O.I. C.G. H.G.
57.7 99.8 168.8 At1g44760 841040 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PMO O.I. C.G. H.G.
56.9 99.8 39.7 At4g01730 826911 zinc ion binding F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP O.I. C.G. H.G.
56.7 99.8 87.0 At1g10180 837556 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
56.4 99.8 32.1 At5g48090 834861 ELP1 (EDM2-LIKE PROTEIN1) F:unknown;P:unknown;C:cellular_component unknown;MPO O.I. C.G. H.G.
55.7 99.8 32.6 At5g01200 831676 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;POMF O.I. C.G. H.G.
54.2 99.8 101.2 At1g53160 841749 SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4) Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR. O.I. C.G. H.G.
53.4 99.8 101.0 At1g10640 837607 polygalacturonase F:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMA O.I. C.G. H.G.
52.2 99.8 57.9 At5g53660 835447 AtGRF7 (GROWTH-REGULATING FACTOR 7) Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower. O.I. C.G. H.G.
50.9 99.8 32.1 At1g26260 839167 CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5) Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1. O.I. C.G. H.G.
49.9 99.8 8.3 At3g06895 819875 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
48.5 99.8 23.8 At3g58770 825046 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
48.2 99.8 96.6 At1g11280 837670 S-locus protein kinase, putative F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVA O.I. C.G. H.G.
48.1 99.8 209.7 At5g67260 836861 CYCD3 Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. O.I. C.G. H.G.
47.7 99.8 46.9 At3g25560 822143 NIK2 (NSP-INTERACTING KINASE 2) F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
44.6 99.8 24.5 At5g40210 834019 nodulin MtN21 family protein F:unknown;P:unknown;C:membrane;BPOAFM O.I. C.G. H.G.
44.1 99.8 11.9 At1g80100 844350 AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6) AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6). O.I. C.G. H.G.
43.7 99.8 69.1 At2g22420 816773 peroxidase 17 (PER17) (P17) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
43.0 99.8 94.1 At1g78170 844153 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
42.6 99.8 17.6 At4g35900 829744 FD bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia. O.I. C.G. H.G.
42.0 99.8 23.6 At1g09450 837468 haspin-related F:protein kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MFOP O.I. C.G. H.G.
41.8 99.8 17.0 At3g12890 820472 ASML2 (ACTIVATOR OF SPOMIN::LUC2) Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes. O.I. C.G. H.G.
41.8 99.8 11.4 At3g15170 820748 CUC1 (CUP-SHAPED COTYLEDON1) Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed. O.I. C.G. H.G.
41.3 99.8 21.9 At3g24340 822023 chr40 (chromatin remodeling 40) F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;BMOFPVA O.I. C.G. H.G.
40.8 99.8 59.8 At5g56590 835760 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall;PFOB O.I. C.G. H.G.
39.8 99.8 65.2 At1g05710 837078 ethylene-responsive protein, putative F:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;P O.I. C.G. H.G.
39.8 99.8 57.3 At3g62800 825455 DRB4 (DOUBLE-STRANDED-RNA-BINDING PROTEIN 4) Encodes a nuclear dsRNA-binding protein that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression. O.I. C.G. H.G.
39.7 99.8 20.6 At4g21270 827876 ATK1 (ARABIDOPSIS THALIANA KINESIN 1) Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis. O.I. C.G. H.G.
39.6 99.8 6.3 At4g01340 828062 CHP-rich zinc finger protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
38.7 99.8 57.0 At5g58600 835974 PMR5 (POWDERY MILDEW RESISTANT 5) Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. O.I. C.G. H.G.
38.7 99.8 23.5 At5g65120 836636 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF O.I. C.G. H.G.
38.6 99.8 33.5 At5g18770 831995 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
38.6 99.8 12.8 At3g26050 822202 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMBFPV O.I. C.G. H.G.
38.4 99.8 88.4 At1g62360 842534 STM (SHOOT MERISTEMLESS) Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia. O.I. C.G. H.G.
37.9 99.8 57.0 At4g18975 827633 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
37.2 99.7 26.5 At3g43920 823508 ribonuclease III family protein Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation. O.I. C.G. H.G.
37.2 99.7 7.2 At5g65580 836684 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
37.1 99.7 70.8 At1g52310 841661 protein kinase family protein / C-type lectin domain-containing protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
37.0 99.7 34.0 At3g11000 820271 - F:unknown;P:unknown;C:endomembrane system;POBFMV O.I. C.G. H.G.
36.4 99.7 32.7 At3g03360 821272 F-box family protein F:unknown;P:biological_process unknown;C:chloroplast;POF O.I. C.G. H.G.
36.3 99.7 143.5 At4g23800 828480 high mobility group (HMG1/2) family protein F:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAV O.I. C.G. H.G.
36.3 99.7 17.4 At1g11120 837653 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFB O.I. C.G. H.G.
35.8 99.7 51.7 At2g31370 817695 bZIP transcription factor (POSF21) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVA O.I. C.G. H.G.
35.7 99.7 4.7 At5g59640 3771538 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
35.6 99.7 28.4 At3g13190 820509 myosin heavy chain-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
35.4 99.7 36.9 At1g69600 843296 ZFHD1 (ZINC FINGER HOMEODOMAIN 1) Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid. O.I. C.G. H.G.
35.1 99.7 14.8 At4g14840 827141 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MOFBPAV O.I. C.G. H.G.
34.8 99.7 31.5 At1g75520 843888 SRS5 (SHI-RELATED SEQUENCE 5) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. O.I. C.G. H.G.
34.6 99.7 10.7 At2g18970 816414 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
34.3 99.7 44.2 At2g28130 817359 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
34.3 99.7 36.6 At1g78550 844191 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:unknown;C:unknown;POBFM O.I. C.G. H.G.
34.3 99.7 12.4 At3g13420 820542 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
34.2 99.7 37.1 At2g31160 817672 LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3) F:molecular_function unknown;P:biological_process unknown;C:unknown;PM O.I. C.G. H.G.
33.9 99.7 38.7 At5g56580 835759 MKK6 (MAP KINASE KINASE 6) Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. O.I. C.G. H.G.
33.8 99.7 29.9 At1g28360 839732 ERF12 (ERF DOMAIN PROTEIN 12) encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. O.I. C.G. H.G.
33.7 99.7 94.9 At3g50070 824169 CYCD3 Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development. O.I. C.G. H.G.
33.5 99.7 24.7 At2g40200 818611 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFB O.I. C.G. H.G.
33.4 99.7 17.8 At1g65810 842892 tRNA-splicing endonuclease positive effector-related F:unknown;P:biological_process unknown;C:cellular_component unknown;MBOFPAV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
559.9	100.0	278.6	At4g35190	829672	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFAM	O.I.	C.G.	H.G.
551.1	100.0	108.2	At5g03840	831683	TFL1 (TERMINAL FLOWER 1)	Controls inflorescence meristem identity. Involved in the floral initiation process. Ortholog of the Antirrhinum gene CENTRORADIALIS (CEN). Involved in protein trafficking to the protein storage vacuole.	O.I.	C.G.	H.G.
374.1	100.0	58.7	At4g31610	829288	REM1 (REPRODUCTIVE MERISTEM 1)	Expressed specifically in reproductive meristems, member of a moderately sized gene family distantly related to known plant DNA binding proteins	O.I.	C.G.	H.G.
351.9	100.0	212.2	At5g67110	836846	ALC (ALCATRAZ)	encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce.	O.I.	C.G.	H.G.
337.4	100.0	49.2	At3g20900	821639	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
268.3	100.0	142.6	At3g61250	825297	AtMYB17 (myb domain protein 17)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
242.7	100.0	53.7	At5g51870	835262	AGL71 (AGAMOUS-LIKE 71)	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBA	O.I.	C.G.	H.G.
210.8	100.0	110.9	At1g23000	838908	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OPMFB	O.I.	C.G.	H.G.
190.9	100.0	87.9	At2g18550	816370	HB-2 (HOMEOBOX-2)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
176.8	100.0	31.1	At2g06200	815176	AtGRF6 (GROWTH-REGULATING FACTOR 6)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower	O.I.	C.G.	H.G.
176.4	100.0	30.3	At2g39680		-	-	O.I.	C.G.	H.G.
155.8	99.9	168.6	At3g55110	824677	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV	O.I.	C.G.	H.G.
149.0	99.9	32.6	At3g13130	820501	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OMPFB	O.I.	C.G.	H.G.
137.6	99.9	267.6	At1g22160	838821	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
115.4	99.9	91.7	At1g60890	842381	phosphatidylinositol-4-phosphate 5-kinase family protein	F:1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity, ATP binding;P:phosphatidylinositol metabolic process;C:plasma membrane;OMBPF	O.I.	C.G.	H.G.
115.3	99.9	114.1	At4g30520	829175	leucine-rich repeat family protein / protein kinase family protein	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
113.3	99.9	46.4	At2g02540	814784	ATHB21 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 21)	Zinc finger homeobox protein. Expressed in vascular tissue. In a yeast one hybrid system was not able to transactivate a reporter gene.	O.I.	C.G.	H.G.
112.7	99.9	173.6	At1g80050	844345	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol.	O.I.	C.G.	H.G.
107.4	99.9	143.3	At5g60910	836212	AGL8 (agamous-like 8)	MADS box gene negatively regulated by APETALA1	O.I.	C.G.	H.G.
106.6	99.9	5.4	At2g30925	817643	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
101.8	99.9	99.7	At3g02210	821245	COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)	F:unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
98.6	99.9	62.2	At5g62165	836337	AGL42 (AGAMOUS LIKE 42)	Encodes a MADS box transcription factor. Expressed in quiescent center.	O.I.	C.G.	H.G.
92.5	99.9	46.2	At5g07800	830673	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPA	O.I.	C.G.	H.G.
90.9	99.9	49.0	At3g25620	822149	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:unknown;C:chloroplast;BOMFAPV	O.I.	C.G.	H.G.
89.3	99.9	167.8	At1g69700	843306	ATHVA22C	Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.	O.I.	C.G.	H.G.
87.4	99.9	99.9	At4g13640	826998	UNE16 (unfertilized embryo sac 16)	F:transcription factor activity;P:double fertilization forming a zygote and endosperm;C:unknown;POBM	O.I.	C.G.	H.G.
87.1	99.9	562.9	At1g70160	843352	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
84.1	99.9	22.8	At5g20420	832164	CHR42 (chromatin remodeling 42)	F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;MFBOPAV	O.I.	C.G.	H.G.
78.7	99.9	28.4	At3g59270	825096	syntaxin-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
77.3	99.9	31.4	At3g24560	822052	RSY3 (RASPBERRY 3)	novel gene involved in embryogenesis	O.I.	C.G.	H.G.
76.3	99.9	313.9	At2g26330	817173	ER (ERECTA)	Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.	O.I.	C.G.	H.G.
75.8	99.9	24.7	At2g27220	817264	BLH5 (BELL1-like homeodomain 5)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
72.8	99.9	147.4	At5g44630	834491	terpene synthase/cyclase family protein	Encodes a sesquiterpene synthase involved in generating all of the group B sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in intrafloral nectaries.	O.I.	C.G.	H.G.
72.3	99.9	35.2	At5g40280	834026	ERA1 (ENHANCED RESPONSE TO ABA 1)	encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.	O.I.	C.G.	H.G.
71.2	99.9	15.8	At1g26530	839193	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
68.8	99.9	33.4	At2g01940	814725	nucleic acid binding / transcription factor/ zinc ion binding	May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.	O.I.	C.G.	H.G.
68.0	99.9	150.2	At5g44620	834490	CYP706A3	member of CYP706A	O.I.	C.G.	H.G.
65.0	99.8	12.2	At2g35870		-	-	O.I.	C.G.	H.G.
64.6	99.8	52.1	At4g16447	827342	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
63.7	99.8	121.3	At4g31910	829321	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:nucleus;PFBO	O.I.	C.G.	H.G.
63.3	99.8	21.0	At3g09910	820149	ATRABC2B (ARABIDOPSIS RAB GTPASE HOMOLOG C2B)	F:GTP binding, transcription factor binding, ATP binding;P:protein transport, small GTPase mediated signal transduction, regulation of transcription, DNA-dependent;C:endomembrane system, intracellular;MOFPBVA	O.I.	C.G.	H.G.
62.0	99.8	47.9	At2g16270	816123	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPVA	O.I.	C.G.	H.G.
60.6	99.8	42.8	At3g14980	820727	PHD finger transcription factor, putative	F:protein binding, DNA binding, zinc ion binding, N-acetyltransferase activity;P:regulation of transcription, DNA-dependent, metabolic process;C:nucleus;MPFOBA	O.I.	C.G.	H.G.
57.7	99.8	168.8	At1g44760	841040	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:unknown;PMO	O.I.	C.G.	H.G.
56.9	99.8	39.7	At4g01730	826911	zinc ion binding	F:zinc ion binding;P:biological_process unknown;C:unknown;MOFP	O.I.	C.G.	H.G.
56.7	99.8	87.0	At1g10180	837556	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
56.4	99.8	32.1	At5g48090	834861	ELP1 (EDM2-LIKE PROTEIN1)	F:unknown;P:unknown;C:cellular_component unknown;MPO	O.I.	C.G.	H.G.
55.7	99.8	32.6	At5g01200	831676	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:unknown;POMF	O.I.	C.G.	H.G.
54.2	99.8	101.2	At1g53160	841749	SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4)	Encodes a member of the SPL (squamosa-promoter binding protein-like)gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. Contains the SBP-box, which encodes the SBP-domain, required and sufficient for interaction with DNA. It is involved in regulation of flowering and vegetative phase change. Its temporal expression is regulated by the microRNA miR156. The target site for the microRNA is in the 3'UTR.	O.I.	C.G.	H.G.
53.4	99.8	101.0	At1g10640	837607	polygalacturonase	F:polygalacturonase activity;P:carbohydrate metabolic process;C:cellular_component unknown;FPBOMA	O.I.	C.G.	H.G.
52.2	99.8	57.9	At5g53660	835447	AtGRF7 (GROWTH-REGULATING FACTOR 7)	Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.	O.I.	C.G.	H.G.
50.9	99.8	32.1	At1g26260	839167	CIB5 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5)	Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.	O.I.	C.G.	H.G.
49.9	99.8	8.3	At3g06895	819875	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
48.5	99.8	23.8	At3g58770	825046	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
48.2	99.8	96.6	At1g11280	837670	S-locus protein kinase, putative	F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
48.1	99.8	209.7	At5g67260	836861	CYCD3	Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.	O.I.	C.G.	H.G.
47.7	99.8	46.9	At3g25560	822143	NIK2 (NSP-INTERACTING KINASE 2)	F:protein binding, protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
44.6	99.8	24.5	At5g40210	834019	nodulin MtN21 family protein	F:unknown;P:unknown;C:membrane;BPOAFM	O.I.	C.G.	H.G.
44.1	99.8	11.9	At1g80100	844350	AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6)	AHP6 lacks the conserved histidine residue (Asn83 in AHP6b), which is required for phosphotransfer, present in the other AHPs. AHP6 does not appear to have phosphotransfer activity. Acts as an inhibitor of cytokinin signaling by interacting with the phosphorelay machinery. Expressed in developing protoxylem and associated pericycle cell files. Negative regulator of cytokinin signaling. Expression is down-regulated by cytokinins. There are two alternatively spliced genes for this locus, AHP6a and AHP6b, differing in the length of the first exon. In ahp6-2 seedlings, only the AHP6a transcript is present. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).	O.I.	C.G.	H.G.
43.7	99.8	69.1	At2g22420	816773	peroxidase 17 (PER17) (P17)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
43.0	99.8	94.1	At1g78170	844153	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
42.6	99.8	17.6	At4g35900	829744	FD	bZIP protein required for positive regulation of flowering. Mutants are late flowering. FD interacts with FT to promote flowering.Expressed in the shoot apex in floral anlagen, then declines in floral primordia.	O.I.	C.G.	H.G.
42.0	99.8	23.6	At1g09450	837468	haspin-related	F:protein kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
41.8	99.8	17.0	At3g12890	820472	ASML2 (ACTIVATOR OF SPOMIN::LUC2)	Encodes a protein belonging to a class of CCT (CONSTANS, CONSTANS-like, TOC1) domain proteins. The protein contains a 43 amino acid-long sequence with high homology to the CCT domain but does not have any B-box or GATA-type zinc finger domains. Functions as a transcriptional activator and regulates the expression of at least a subset of sugar-inducible genes.	O.I.	C.G.	H.G.
41.8	99.8	11.4	At3g15170	820748	CUC1 (CUP-SHAPED COTYLEDON1)	Encodes a transcription factor involved in shoot apical meristem formation and auxin-mediated lateral root formation. The gene is thought not to be involved in stress responses (NaCl, auxins, ethylene). Cuc mutant was first recognized at the heart stage, where embryos lacking two distinct bulges of cotyledonary primordia were observed.	O.I.	C.G.	H.G.
41.3	99.8	21.9	At3g24340	822023	chr40 (chromatin remodeling 40)	F:helicase activity, DNA binding, ATP binding, nucleic acid binding;P:unknown;C:unknown;BMOFPVA	O.I.	C.G.	H.G.
40.8	99.8	59.8	At5g56590	835760	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall;PFOB	O.I.	C.G.	H.G.
39.8	99.8	65.2	At1g05710	837078	ethylene-responsive protein, putative	F:transcription factor activity;P:response to ethylene stimulus, regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
39.8	99.8	57.3	At3g62800	825455	DRB4 (DOUBLE-STRANDED-RNA-BINDING PROTEIN 4)	Encodes a nuclear dsRNA-binding protein that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression.	O.I.	C.G.	H.G.
39.7	99.8	20.6	At4g21270	827876	ATK1 (ARABIDOPSIS THALIANA KINESIN 1)	Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis.	O.I.	C.G.	H.G.
39.6	99.8	6.3	At4g01340	828062	CHP-rich zinc finger protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
38.7	99.8	57.0	At5g58600	835974	PMR5 (POWDERY MILDEW RESISTANT 5)	Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica.	O.I.	C.G.	H.G.
38.7	99.8	23.5	At5g65120	836636	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF	O.I.	C.G.	H.G.
38.6	99.8	33.5	At5g18770	831995	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
38.6	99.8	12.8	At3g26050	822202	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMBFPV	O.I.	C.G.	H.G.
38.4	99.8	88.4	At1g62360	842534	STM (SHOOT MERISTEMLESS)	Class I knotted-like homeodomain protein that is required for shoot apical meristem (SAM) formation during embryogenesis and for SAM function throughout the lifetime of the plant. Functions by preventing incorporation of cells in the meristem center into differentiating organ primordia.	O.I.	C.G.	H.G.
37.9	99.8	57.0	At4g18975	827633	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
37.2	99.7	26.5	At3g43920	823508	ribonuclease III family protein	Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.	O.I.	C.G.	H.G.
37.2	99.7	7.2	At5g65580	836684	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
37.1	99.7	70.8	At1g52310	841661	protein kinase family protein / C-type lectin domain-containing protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
37.0	99.7	34.0	At3g11000	820271	-	F:unknown;P:unknown;C:endomembrane system;POBFMV	O.I.	C.G.	H.G.
36.4	99.7	32.7	At3g03360	821272	F-box family protein	F:unknown;P:biological_process unknown;C:chloroplast;POF	O.I.	C.G.	H.G.
36.3	99.7	143.5	At4g23800	828480	high mobility group (HMG1/2) family protein	F:transcription factor activity;P:unknown;C:nucleus, chloroplast;MOBFPAV	O.I.	C.G.	H.G.
36.3	99.7	17.4	At1g11120	837653	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFB	O.I.	C.G.	H.G.
35.8	99.7	51.7	At2g31370	817695	bZIP transcription factor (POSF21)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;OMFPBVA	O.I.	C.G.	H.G.
35.7	99.7	4.7	At5g59640	3771538	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
35.6	99.7	28.4	At3g13190	820509	myosin heavy chain-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
35.4	99.7	36.9	At1g69600	843296	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.	O.I.	C.G.	H.G.
35.1	99.7	14.8	At4g14840	827141	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MOFBPAV	O.I.	C.G.	H.G.
34.8	99.7	31.5	At1g75520	843888	SRS5 (SHI-RELATED SEQUENCE 5)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.	O.I.	C.G.	H.G.
34.6	99.7	10.7	At2g18970	816414	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
34.3	99.7	44.2	At2g28130	817359	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
34.3	99.7	36.6	At1g78550	844191	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:unknown;C:unknown;POBFM	O.I.	C.G.	H.G.
34.3	99.7	12.4	At3g13420	820542	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
34.2	99.7	37.1	At2g31160	817672	LSH3 (LIGHT SENSITIVE HYPOCOTYLS 3)	F:molecular_function unknown;P:biological_process unknown;C:unknown;PM	O.I.	C.G.	H.G.
33.9	99.7	38.7	At5g56580	835759	MKK6 (MAP KINASE KINASE 6)	Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro.	O.I.	C.G.	H.G.
33.8	99.7	29.9	At1g28360	839732	ERF12 (ERF DOMAIN PROTEIN 12)	encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.	O.I.	C.G.	H.G.
33.7	99.7	94.9	At3g50070	824169	CYCD3	Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.	O.I.	C.G.	H.G.
33.5	99.7	24.7	At2g40200	818611	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMOFB	O.I.	C.G.	H.G.
33.4	99.7	17.8	At1g65810	842892	tRNA-splicing endonuclease positive effector-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;MBOFPAV	O.I.	C.G.	H.G.

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GSM ID	GSM242960
Assay name	Steroid day 3 (day3D2)
GSE experiment	GSE9605: Target genes of AGAMOUS during early flower development in Arabidopsis

Microarray experiments to specifically-expressed genes

GSM ID GSM242960 Assay name Steroid day 3 (day3D2) GSE experiment GSE9605: Target genes of AGAMOUS during early flower development in Arabidopsis

GSM ID GSM242960

Assay name Steroid day 3 (day3D2)

GSE experiment GSE9605: Target genes of AGAMOUS during early flower development in Arabidopsis