Microarray experiments to specifically-expressed genes

GSM ID GSM239253
Assay name CaMV::DME pollen
GSE experiment GSE9408: Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
430.4100.096.2At1g73860843722ATP binding / microtubule motorF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOBFPAVO.I.C.G.H.G.
407.9100.0166.0At3g01620821102glycosyl transferase family 17 proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFVO.I.C.G.H.G.
352.9100.0111.4At3g20200821564protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
311.4100.0158.4At1g52240841654ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .O.I.C.G.H.G.
290.8100.0113.7At4g04980825839-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVAO.I.C.G.H.G.
277.9100.054.9At5g25430832617anion exchangerF:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVO.I.C.G.H.G.
260.6100.0114.8At4g14810827137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
258.2100.074.9At3g13660820570disease resistance responseF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
257.6100.052.7At5g26150832684protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
256.3100.075.5At2g19980816517allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.H.G.
255.9100.0125.4At2g03410814870Mo25 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
255.2100.0106.6At1g65240842831aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PMFOO.I.C.G.H.G.
254.6100.0139.6At1g28550839755AtRABA1i (Arabidopsis Rab GTPase homolog A1i)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAO.I.C.G.H.G.
253.5100.0159.0At1g61290842423SYP124 (SYNTAXIN OF PLANTS 124)member of SYP12 Gene FamilyO.I.C.G.H.G.
246.2100.0244.8At1g70540843391EDA24 (embryo sac development arrest 24)F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:polar nucleus fusion;C:endomembrane system;PO.I.C.G.H.G.
239.4100.069.1At5g60740836195ATPase, coupled to transmembrane movement of substancesF:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:endomembrane system, membrane;BOMFAPVO.I.C.G.H.G.
234.0100.081.9At5g05070830389zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPO.I.C.G.H.G.
233.0100.0176.5At4g16745827378exostosin family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PMOBFO.I.C.G.H.G.
232.4100.0328.0At4g39110830066protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAO.I.C.G.H.G.
230.9100.034.2At2g34440818007AGL29 (AGAMOUS-LIKE 29)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBO.I.C.G.H.G.
228.9100.094.5At5g61710836293unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
225.5100.0161.2At2g29050817453ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)F:unknown;P:unknown;C:Golgi apparatus;BOMPFAO.I.C.G.H.G.
223.7100.0180.1At4g33850829527glycosyl hydrolase family 10 proteinPseudogene of AT4G33850; glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
221.3100.0141.6At2g24370816973ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
220.5100.052.4At5g09430830802hydrolaseF:hydrolase activity;P:unknown;C:unknown;BOMPAFO.I.C.G.H.G.
220.3100.090.4At5g42340834240binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;MPOFBVO.I.C.G.H.G.
219.8100.079.3At2g48150819427ATGPX4 (GLUTATHIONE PEROXIDASE 4)Encodes glutathione peroxidase.O.I.C.G.H.G.
215.6100.098.1At4g10010826592protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
214.1100.055.4At2g33870817957ArRABA1h (Arabidopsis Rab GTPase homolog A1h)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.C.G.H.G.
213.2100.0192.7At3g60570825228ATEXPB5 (ARABIDOPSIS THALIANA EXPANSIN B5)member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)O.I.C.G.H.G.
211.0100.0165.6At3g24720--O.I.C.G.H.G.
207.8100.0217.5At1g52580841690ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFAO.I.C.G.H.G.
204.5100.082.8At3g01630819891-F:unknown;P:unknown;C:unknown;PBOFAMO.I.C.G.H.G.
204.4100.0177.0At3g06830819867pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAMO.I.C.G.H.G.
203.3100.098.1At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
202.8100.0137.1At2g33270817890ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)Encodes a member of the thioredoxin family protein. Located in the chloroplast.O.I.C.G.H.G.
202.7100.0259.0At3g21570821711unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
200.6100.0210.1At1g01460839469PIPK11Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.O.I.C.G.H.G.
198.3100.074.0At5g10260830890AtRABH1e (Arabidopsis Rab GTPase homolog H1e)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.C.G.H.G.
196.2100.0239.9At4g01575828124serine protease inhibitor, Kazal-type family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
196.1100.0147.2At3g45280823666SYP72 (SYNTAXIN OF PLANTS 72)syntaxin of plants 72 (SYP72)O.I.C.G.H.G.
194.8100.070.7At3g05820819751beta-fructofuranosidase/ catalyticF:catalytic activity, beta-fructofuranosidase activity;P:biological_process unknown;C:unknown;OPBO.I.C.G.H.G.
193.4100.0201.6At3g18220821350phosphatidic acid phosphatase family protein / PAP2 family proteinF:catalytic activity, phosphatidate phosphatase activity;P:biological_process unknown;C:membrane;MFOBPAVO.I.C.G.H.G.
193.4100.0190.6At2g20320816551-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBO.I.C.G.H.G.
193.0100.065.8At1g24110839023peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
190.5100.0124.3At1g74490843790protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
188.8100.046.7At3g05140819676RBK2 (Rop Binding protein Kinases 2)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:nucleus, cytoplasm;MPOBFVAO.I.C.G.H.G.
185.7100.066.3At5g47470834797nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMO.I.C.G.H.G.
184.6100.0193.4At4g28280828943unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
184.4100.0208.3At3g54240824591hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BPOFAMO.I.C.G.H.G.
184.2100.0135.4At2g45310819139GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4)UDP-D-glucuronate 4-epimeraseO.I.C.G.H.G.
183.8100.0255.9At2g18180816331SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:transporter activity;P:transport;C:unknown;MPFOO.I.C.G.H.G.
181.9100.0234.3At3g21180821671ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.O.I.C.G.H.G.
181.4100.0130.3At3g46520823805ACT12 (ACTIN-12)Member of actin subclass composed of ACT12 and ACT4. RNA is expressed at very low levels in vegetative organs, low levels in flowers and very high levels in pollen. Expression of an ACT12/GUS fusion was found in vascular tissues, tapetum, developing and mature pollen, the root cap and in a ring of pericycle tissues during lateral root initiation and early development.O.I.C.G.H.G.
179.5100.038.5At4g24170828517kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFBPVAO.I.C.G.H.G.
178.4100.0139.7At2g28180817364ATCHX8member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
178.2100.043.3At4g15650827242protein kinase-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
176.2100.079.6At2g46360819243unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
174.2100.050.9At1g23540838963protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOBFPVAO.I.C.G.H.G.
172.9100.056.1At3g59830825152ankyrin protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVAO.I.C.G.H.G.
172.5100.0208.1At3g61230825295LIM domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
172.2100.0266.2At2g36020818175HVA22J (HVA22-LIKE PROTEIN J)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOO.I.C.G.H.G.
171.0100.074.1At3g29060822550-F:unknown;P:unknown;C:integral to membrane;MFPOVBAO.I.C.G.H.G.
167.6100.084.3At1g69050843237unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
167.2100.0159.7At2g41860818786CPK14member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
166.8100.0222.5At5g27870832850pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;BMOFPVAO.I.C.G.H.G.
166.8100.092.3At5g13990831247ATEXO70C2 (exocyst subunit EXO70 family protein C2)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.O.I.C.G.H.G.
166.6100.069.7At4g02650828212epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;MOPFBAVO.I.C.G.H.G.
165.9100.0107.6At5g61360836257unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
164.7100.0169.7At2g26490817190transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:heterotrimeric G-protein complex;MFOBPAO.I.C.G.H.G.
164.6100.0254.8At5g64510836572unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
164.399.981.6At1g13890837948SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.O.I.C.G.H.G.
164.299.9135.0At5g01610831718unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
163.099.9247.1At2g20700816598unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
162.699.9221.6At3g56600824827inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptorF:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:unknown;PMOFBO.I.C.G.H.G.
162.599.9114.2At2g25600817099SPIK (Shaker Pollen Inward K+ channel)mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) familyO.I.C.G.H.G.
162.499.9172.2At4g00350827306MATE efflux family proteinF:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMAO.I.C.G.H.G.
160.499.9136.1At5g56640835765MIOX5Myo-Inositol Oxygenase gene familyO.I.C.G.H.G.
160.099.9112.7At2g17890816299CPK16member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
158.499.9259.5At5g39400833936PTEN1F:phosphatase activity;P:N-terminal protein myristoylation, pollen development;C:cellular_component unknown;MOFPBAO.I.C.G.H.G.
158.299.973.0At2g21990816735unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
157.399.9188.7At3g19310821465phospholipase C/ phosphoric diester hydrolaseF:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, lipid metabolic process;C:endomembrane system;FPOBMO.I.C.G.H.G.
155.799.9310.1At1g23350838944invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
155.399.9145.5At5g42490834256kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAO.I.C.G.H.G.
154.899.9118.1At1g49270841351protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MOBPFVAO.I.C.G.H.G.
154.099.9120.6At1g12450837802-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFAO.I.C.G.H.G.
153.399.9342.4At4g35180829671LHT7 (Lys/His transporter 7)F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;PFMOBO.I.C.G.H.G.
153.199.9124.7At5g02570831878histone H2B, putativeF:DNA binding;P:nucleosome assembly;C:nucleolus;MPOFO.I.C.G.H.G.
152.099.9170.2At5g24240832491phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family proteinF:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:protein modification process;C:peroxisome;MPOFVBO.I.C.G.H.G.
151.599.9267.6At1g51240841547-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
151.399.9250.4At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAO.I.C.G.H.G.
150.099.9249.3At5g27980832868seed maturation family proteinF:molecular_function unknown;P:multicellular organismal development;C:cellular_component unknown;PBMOO.I.C.G.H.G.
149.699.990.2At2g22340816766unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
148.699.9252.6At2g33100817872ATCSLD1encodes a gene similar to cellulose synthaseO.I.C.G.H.G.
148.699.9130.4At1g74000843738SS3 (STRICTOSIDINE SYNTHASE 3)encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis.O.I.C.G.H.G.
147.899.952.6At1g05020839343epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;PMFOBO.I.C.G.H.G.
147.599.999.4At5g55980835696serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
147.499.976.7At4g27110828819COBL11 (COBRA-LIKE PROTEIN 11 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
147.399.9205.9At5g03690831759fructose-bisphosphate aldolase, putativeF:fructose-bisphosphate aldolase activity, catalytic activity;P:pentose-phosphate shunt;C:unknown;OMBPFO.I.C.G.H.G.
145.799.998.0At2g38500818432-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.



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