Microarray experiments to specifically-expressed genes

GSM ID GSM239251
Assay name Columbia glabrous (C24) wild type pollen
GSE experiment GSE9408: Identification of putative Arabidopsis DEMETER target genes by GeneChip Analysis

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
423.4100.095.4At1g73860843722ATP binding / microtubule motorF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex, chloroplast;MOBFPAVO.I.C.G.H.G.
417.2100.096.3At2g19980816517allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFBOO.I.C.G.H.G.
355.8100.0134.1At4g14810827137unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
352.8100.0117.3At5g61710836293unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
323.0100.0161.3At1g52240841654ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .O.I.C.G.H.G.
291.5100.0170.5At1g61290842423SYP124 (SYNTAXIN OF PLANTS 124)member of SYP12 Gene FamilyO.I.C.G.H.G.
285.6100.0203.5At4g33850829527glycosyl hydrolase family 10 proteinPseudogene of AT4G33850; glycosyl hydrolase family 10 proteinO.I.C.G.H.G.
283.1100.097.5At3g01630819891-F:unknown;P:unknown;C:unknown;PBOFAMO.I.C.G.H.G.
269.4100.0238.0At3g18220821350phosphatidic acid phosphatase family protein / PAP2 family proteinF:catalytic activity, phosphatidate phosphatase activity;P:biological_process unknown;C:membrane;MFOBPAVO.I.C.G.H.G.
264.9100.057.4At5g09430830802hydrolaseF:hydrolase activity;P:unknown;C:unknown;BOMPAFO.I.C.G.H.G.
253.1100.0130.8At3g01620821102glycosyl transferase family 17 proteinF:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFVO.I.C.G.H.G.
251.8100.0196.1At2g41860818786CPK14member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
250.4100.0124.0At2g03410814870Mo25 family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.C.G.H.G.
248.4100.0245.9At1g70540843391EDA24 (embryo sac development arrest 24)F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:polar nucleus fusion;C:endomembrane system;PO.I.C.G.H.G.
247.0100.073.3At3g13660820570disease resistance responseF:molecular_function unknown;P:lignan biosynthetic process, defense response;C:cellular_component unknown;PO.I.C.G.H.G.
241.0100.0288.4At1g02000839289GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)UDP-D-glucuronate 4-epimeraseO.I.C.G.H.G.
232.5100.0261.1At4g01575828124serine protease inhibitor, Kazal-type family proteinF:serine-type endopeptidase inhibitor activity;P:biological_process unknown;C:endomembrane system;PO.I.C.G.H.G.
230.2100.081.2At2g48150819427ATGPX4 (GLUTATHIONE PEROXIDASE 4)Encodes glutathione peroxidase.O.I.C.G.H.G.
227.7100.048.9At4g15650827242protein kinase-relatedF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOBFPVAO.I.C.G.H.G.
227.3100.089.4At3g20200821564protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
225.3100.056.8At2g33870817957ArRABA1h (Arabidopsis Rab GTPase homolog A1h)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.C.G.H.G.
225.1100.0126.5At1g06540837165unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
224.9100.0226.2At1g52580841690ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5)F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;BOMPFAO.I.C.G.H.G.
221.2100.0320.1At4g39110830066protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVAO.I.C.G.H.G.
220.2100.070.3At1g24110839023peroxidase, putativeF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBMO.I.C.G.H.G.
220.0100.0129.8At1g28550839755AtRABA1i (Arabidopsis Rab GTPase homolog A1i)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVAO.I.C.G.H.G.
219.6100.0269.6At3g21570821711unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
218.1100.033.2At2g34440818007AGL29 (AGAMOUS-LIKE 29)F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOBO.I.C.G.H.G.
218.0100.098.4At4g04980825839-F:molecular_function unknown;P:biological_process unknown;C:unknown;MOFPBVAO.I.C.G.H.G.
216.9100.0218.5At1g01460839469PIPK11Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.O.I.C.G.H.G.
214.9100.097.8At1g65240842831aspartyl protease family proteinF:aspartic-type endopeptidase activity;P:proteolysis;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PMFOO.I.C.G.H.G.
213.3100.0145.7At2g45310819139GAE4 (UDP-D-GLUCURONATE 4-EPIMERASE 4)UDP-D-glucuronate 4-epimeraseO.I.C.G.H.G.
213.2100.0207.9At4g28280828943unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PO.I.C.G.H.G.
210.1100.076.1At5g10260830890AtRABH1e (Arabidopsis Rab GTPase homolog H1e)F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:unknown;MOFPBVAO.I.C.G.H.G.
209.2100.047.7At5g25430832617anion exchangerF:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBVO.I.C.G.H.G.
206.5100.0120.1At5g61360836257unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.C.G.H.G.
206.2100.093.5At1g69050843237unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
202.3100.0137.0At2g33270817890ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3)Encodes a member of the thioredoxin family protein. Located in the chloroplast.O.I.C.G.H.G.
201.4100.060.5At3g59830825152ankyrin protein kinase, putativeF:protein serine/threonine/tyrosine kinase activity, kinase activity;P:regulation of signal transduction, protein amino acid phosphorylation;C:chloroplast;MOPBFVAO.I.C.G.H.G.
201.1100.0137.4At3g02555820627unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
198.5100.081.8At2g21990816735unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PO.I.C.G.H.G.
197.4100.0265.2At2g18180816331SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeF:transporter activity;P:transport;C:unknown;MPFOO.I.C.G.H.G.
193.4100.0253.5At4g03290827993calcium-binding protein, putativeF:calcium ion binding;P:response to cold;C:nucleus;MFPOBO.I.C.G.H.G.
192.9100.083.3At2g46360819243unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
192.6100.0158.2At3g24720--O.I.C.G.H.G.
192.3100.0148.9At2g29050817453ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)F:unknown;P:unknown;C:Golgi apparatus;BOMPFAO.I.C.G.H.G.
191.6100.0145.5At3g45280823666SYP72 (SYNTAXIN OF PLANTS 72)syntaxin of plants 72 (SYP72)O.I.C.G.H.G.
191.5100.045.5At5g26150832684protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
191.4100.0160.0At4g16745827378exostosin family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PMOBFO.I.C.G.H.G.
191.1100.072.9At3g51150824279kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOPFBVO.I.C.G.H.G.
188.2100.083.6At5g42340834240binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;MPOFBVO.I.C.G.H.G.
188.1100.087.3At1g13890837948SNAP30 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 30)Encodes a member of a gene family homologous to mammalian SNAP25, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.O.I.C.G.H.G.
187.5100.054.3At2g03840814910TET13 (TETRASPANIN13)Member of TETRASPANIN familyO.I.C.G.H.G.
187.4100.0111.1At2g38500818432-F:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.C.G.H.G.
185.8100.0122.1At2g25600817099SPIK (Shaker Pollen Inward K+ channel)mutant has Impaired pollen-tube growth; member of Shaker K+ channel family, also Stelar K+ outward rectifying channel (SKOR) familyO.I.C.G.H.G.
184.4100.0277.8At4g04930825832DES-1-LIKEEncodes a sphingolipid delta4-desaturase, involved in sphingolipid biosynthesis. Specifically expressed in floral tissues. Knockout mutants were devoid of sphinga-4,8-dienine in floral tissues.O.I.C.G.H.G.
183.1100.0207.6At3g54240824591hydrolase, alpha/beta fold family proteinF:hydrolase activity;P:biological_process unknown;C:endomembrane system;BPOFAMO.I.C.G.H.G.
180.4100.0140.5At2g28180817364ATCHX8member of Putative Na+/H+ antiporter familyO.I.C.G.H.G.
180.2100.0212.7At3g61230825295LIM domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOFO.I.C.G.H.G.
179.2100.0119.2At2g17890816299CPK16member of Calcium Dependent Protein KinaseO.I.C.G.H.G.
178.5100.0127.2At2g24370816973ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, response to stress;C:cellular_component unknown;MPOBFVAO.I.C.G.H.G.
177.9100.098.3At2g22340816766unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
177.8100.075.5At3g29060822550-F:unknown;P:unknown;C:integral to membrane;MFPOVBAO.I.C.G.H.G.
177.6100.0274.8At5g39400833936PTEN1F:phosphatase activity;P:N-terminal protein myristoylation, pollen development;C:cellular_component unknown;MOFPBAO.I.C.G.H.G.
177.3100.0155.5At5g42490834256kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVAO.I.C.G.H.G.
176.0100.0164.3At3g06830819867pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFOAMO.I.C.G.H.G.
175.1100.0129.5At5g14890831341NHL repeat-containing proteinF:unknown;P:unknown;C:endomembrane system;BOMPAO.I.C.G.H.G.
174.3100.042.3At4g20160827762-F:unknown;P:unknown;C:chloroplast;MOFBPVAO.I.C.G.H.G.
173.5100.056.2At5g35090833460unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PO.I.C.G.H.G.
173.0100.044.7At3g05140819676RBK2 (Rop Binding protein Kinases 2)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:nucleus, cytoplasm;MPOBFVAO.I.C.G.H.G.
169.9100.0262.7At1g74010843739strictosidine synthase family proteinF:strictosidine synthase activity;P:biosynthetic process;C:plant-type cell wall;PMBOAO.I.C.G.H.G.
169.7100.0264.3At2g36020818175HVA22J (HVA22-LIKE PROTEIN J)F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFOO.I.C.G.H.G.
167.5100.069.3At5g05070830389zinc ion bindingF:zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOFPO.I.C.G.H.G.
167.1100.0170.9At2g26490817190transducin family protein / WD-40 repeat family proteinF:nucleotide binding;P:biological_process unknown;C:heterotrimeric G-protein complex;MFOBPAO.I.C.G.H.G.
164.7100.0124.7At1g12450837802-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPMFAO.I.C.G.H.G.
164.5100.0193.0At3g19310821465phospholipase C/ phosphoric diester hydrolaseF:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, lipid metabolic process;C:endomembrane system;FPOBMO.I.C.G.H.G.
163.899.9129.0At5g02570831878histone H2B, putativeF:DNA binding;P:nucleosome assembly;C:nucleolus;MPOFO.I.C.G.H.G.
163.799.9162.9At1g18990838480unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MOPFBVAO.I.C.G.H.G.
163.699.987.9At2g46300819238-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMO.I.C.G.H.G.
163.499.940.1At1g75160843853unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
163.199.9222.0At3g56600824827inositol or phosphatidylinositol kinase/ phosphotransferase, alcohol group as acceptorF:inositol or phosphatidylinositol kinase activity, phosphotransferase activity, alcohol group as acceptor;P:biological_process unknown;C:unknown;PMOFBO.I.C.G.H.G.
160.899.9350.7At4g35180829671LHT7 (Lys/His transporter 7)F:amino acid transmembrane transporter activity;P:amino acid transport;C:membrane;PFMOBO.I.C.G.H.G.
160.699.9198.3At4g27790828892calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOBO.I.C.G.H.G.
160.399.9275.3At1g51240841547-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
160.299.9288.0At3g62640825438unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.C.G.H.G.
158.899.936.2At4g24170828517kinesin motor family proteinF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFBPVAO.I.C.G.H.G.
158.699.968.0At4g02650828212epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat;MOPFBAVO.I.C.G.H.G.
157.999.9195.6At5g25340832606unknown proteinF:molecular_function unknown;P:unknown;C:cellular_component unknown;MPOO.I.C.G.H.G.
155.999.960.8At5g47470834797nodulin MtN21 family proteinF:unknown;P:unknown;C:membrane;BOPAMO.I.C.G.H.G.
155.899.985.9At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G.
155.799.956.5At5g41780834183myosin heavy chain-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPAVO.I.C.G.H.G.
155.199.9230.3At3g20530821599protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVAO.I.C.G.H.G.
155.199.9115.6At1g79860844325ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth Growth.O.I.C.G.H.G.
155.099.9244.9At2g33460817911RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis.O.I.C.G.H.G.
154.299.975.7At1g11250837666SYP125 (SYNTAXIN OF PLANTS 125)member of SYP12 Gene FamilyO.I.C.G.H.G.
153.499.9116.7At2g32460817807MYB101Member of the R2R3 factor gene family.O.I.C.G.H.G.
153.199.9269.6At2g26410817181Iqd4 (IQ-domain 4)F:calmodulin binding;P:unknown;C:unknown;PMOBVFAO.I.C.G.H.G.
153.199.982.6At4g10010826592protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:cellular_component unknown;MPOFBVAO.I.C.G.H.G.
152.799.953.0At5g56160835715transporterF:transporter activity;P:transport;C:cellular_component unknown;MPFOAO.I.C.G.H.G.
152.599.9174.8At4g05330825881AGD13 (ARF-GAP domain 13)A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.O.I.C.G.H.G.



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