Microarray experiments to specifically-expressed genes

GSM ID	GSM238428
Assay name	Embryo 16DAF; Seed development; Rep 1
GSE experiment	GSE9365: Expression data from barley maturing and germinating grains

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
181.1	100.0	14.3	Contig18217_at	Contig18217	-	-	6e+0	At5g24250	unknown protein	O.I.	C.G.	H.G.	Please select
174.1	100.0	4.6	Contig14215_at	Contig14215	-	-	4e+0	At3g18740	60S ribosomal protein L30 (RPL30C)	O.I.	C.G.	H.G.	Please select
169.7	100.0	1.6	Contig22998_at	Contig22998	-	-	2e+0	At2g20270	glutaredoxin family protein	O.I.	C.G.	H.G.	Please select
130.9	100.0	1.5	Contig18928_at	Contig18928	-	-	1e+0	At1g09815	POLD4 (POLYMERASE DELTA 4)	O.I.	C.G.	H.G.	Please select
130.5	100.0	53.7	Contig3480_at	Contig3480	-	-	4e-1	At5g16660	unknown protein	O.I.	C.G.	H.G.	Please select
115.8	100.0	4.7	Contig7221_at	Contig7221	-	-	6e+0	At5g47610	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
113.9	100.0	9.4	Contig25923_at	Contig25923	-	-	1e+0	At5g21060	homoserine dehydrogenase family protein	O.I.	C.G.	H.G.	Please select
110.3	100.0	1.5	Contig18856_at	Contig18856	-	-	2e-6	At5g04940	SUVH1 (SU(VAR)3-9 HOMOLOG 1)	O.I.	C.G.	H.G.	Please select
110.1	100.0	0.3	EBpi01_SQ002_O17_at	EBpi01_SQ002_O17	-	-	8e-1	At1g07880	ATMPK13	O.I.	C.G.	H.G.	Please select
96.3	100.0	1.3	Contig20523_at	Contig20523	-	-	1e+0	At5g65390	AGP7	O.I.	C.G.	H.G.	Please select
95.5	100.0	1.1	Contig6786_at	Contig6786	-	-	1e+0	At1g25460	oxidoreductase family protein	O.I.	C.G.	H.G.	Please select
94.0	100.0	14.7	Contig7787_at	Contig7787	-	-	2e+0	At4g21920	unknown protein	O.I.	C.G.	H.G.	Please select
93.5	100.0	0.2	Contig21280_at	Contig21280	-	-	4e+0	At5g10030	TGA4 (TGACG MOTIF-BINDING FACTOR 4)	O.I.	C.G.	H.G.	Please select
93.3	100.0	4.7	Contig14748_at	Contig14748	-	-	5e+0	At4g02482	chloroplast outer envelope GTP-binding protein, putative	O.I.	C.G.	H.G.	Please select
87.4	100.0	3.4	Contig16205_at	Contig16205	-	-	2e-12	At4g29360	glycosyl hydrolase family 17 protein	O.I.	C.G.	H.G.	Please select
86.0	100.0	0.0	HI05C03u_at	HI05C03u	-	-	4e+0	At3g62050	-	O.I.	C.G.	H.G.	Please select
84.9	100.0	0.1	Contig12870_at	Contig12870	-	-	2e+0	At5g38610	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select
78.8	100.0	0.0	Contig20873_at	Contig20873	-	-	2e+0	At4g32400	SHS1 (SODIUM HYPERSENSITIVE 1)	O.I.	C.G.	H.G.	Please select
78.2	100.0	0.0	Contig20667_at	Contig20667	-	-	1e+0	At5g08480	VQ motif-containing protein	O.I.	C.G.	H.G.	Please select
76.1	100.0	13.5	Contig12939_at	Contig12939	-	-	4e-2	At1g44760	universal stress protein (USP) family protein	O.I.	C.G.	H.G.	Please select
75.8	100.0	31.6	Contig9469_s_at	Contig9469	-	-	5e+0	At1g48145	unknown protein	O.I.	C.G.	H.G.	Please select
75.5	100.0	2.2	Contig13064_at	Contig13064	-	-	3e-2	At4g14723	-	O.I.	C.G.	H.G.	Please select
74.9	100.0	0.6	EBem05_SQ002_F23_at	EBem05_SQ002_F23	-	-	6e-2	At4g25190	unknown protein	O.I.	C.G.	H.G.	Please select
73.6	100.0	4.3	Contig11972_at	Contig11972	-	-	2e-1	At3g26610	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	H.G.	Please select
72.6	100.0	1.4	Contig17489_at	Contig17489	-	-	2e+0	At5g17300	myb family transcription factor	O.I.	C.G.	H.G.	Please select
72.4	100.0	2.0	HF13K24r_at	HF13K24r	-	-	5e+0	At3g27360	histone H3	O.I.	C.G.	H.G.	Please select
70.9	100.0	0.3	Contig25269_at	Contig25269	-	-	1e+0	At1g53785	unknown protein	O.I.	C.G.	H.G.	Please select
69.9	100.0	28.1	Contig12416_at	Contig12416	-	-	8e-1	At4g11870	unknown protein	O.I.	C.G.	H.G.	Please select
69.9	100.0	21.7	HVSMEk0003I10r2_x_at	HVSMEk0003I10r2	-	-	2e+1	At5g44730	haloacid dehalogenase-like hydrolase family protein	O.I.	C.G.	H.G.	Please select
68.5	100.0	0.4	HVSMEg0002G23r2_at	HVSMEg0002G23r2	-	-	1e+1	At5g09990	PROPEP5 (Elicitor peptide 5 precursor)	O.I.	C.G.	H.G.	Please select
65.5	100.0	1.1	Contig25867_at	Contig25867	-	-	5e-2	At2g21490	LEA (DEHYDRIN LEA)	O.I.	C.G.	H.G.	Please select
65.3	100.0	2.8	Contig10710_at	Contig10710	-	-	2e-13	At3g61530	PANB2	O.I.	C.G.	H.G.	Please select
64.6	100.0	0.1	HI12M06r_at	HI12M06r	-	-	3e-19	At5g19730	pectinesterase family protein	O.I.	C.G.	H.G.	Please select
63.3	100.0	0.6	Contig10068_at	Contig10068	-	-	2e+0	At3g54840	ARA6	O.I.	C.G.	H.G.	Please select
62.2	100.0	2.4	Contig6604_at	Contig6604	-	-	1e-4	At1g18100	E12A11	O.I.	C.G.	H.G.	Please select
60.4	100.0	0.6	rbags18n09_at	rbags18n09	-	-	8e+0	At4g02550	unknown protein	O.I.	C.G.	H.G.	Please select
60.4	100.0	0.4	Contig20667_s_at	Contig20667	-	-	1e+0	At5g08480	VQ motif-containing protein	O.I.	C.G.	H.G.	Please select
59.3	100.0	0.4	EBem10_SQ002_A16_at	EBem10_SQ002_A16	-	-	5e+0	At5g23260	TT16 (TRANSPARENT TESTA16)	O.I.	C.G.	H.G.	Please select
59.2	100.0	0.5	Contig23837_at	Contig23837	-	-	2e+0	At3g15909	unknown protein	O.I.	C.G.	H.G.	Please select
58.4	100.0	0.4	Contig9455_at	Contig9455	-	-	9e-1	At4g03180	unknown protein	O.I.	C.G.	H.G.	Please select
57.5	100.0	0.7	Contig17447_at	Contig17447	-	-	1e-1	At5g03795	-	O.I.	C.G.	H.G.	Please select
56.8	100.0	1.0	Contig21417_at	Contig21417	-	-	3e-2	At1g48480	RKL1	O.I.	C.G.	H.G.	Please select
56.3	100.0	0.5	Contig11754_at	Contig11754	-	-	6e-1	At3g08690	UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)	O.I.	C.G.	H.G.	Please select
55.4	100.0	6.5	HVSMEa0008L11r2_at	HVSMEa0008L11r2	-	-	2e-1	At3g50960	PLP3a (Phosducin-like protein 3 homolog)	O.I.	C.G.	H.G.	Please select
54.8	100.0	15.1	Contig12498_at	Contig12498	-	-	1e+0	At3g13570	SCL30a	O.I.	C.G.	H.G.	Please select
52.7	100.0	2.1	Contig6787_at	Contig6787	-	-	7e-1	At2g36190	AtcwINV4 (Arabidopsis thaliana cell wall invertase 4)	O.I.	C.G.	H.G.	Please select
51.7	100.0	4.2	Contig5656_at	Contig5656	-	-	2e-3	At1g80050	APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)	O.I.	C.G.	H.G.	Please select
51.6	100.0	6.4	Contig1679_s_at	Contig1679	-	-	7e+0	At5g55130	CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5)	O.I.	C.G.	H.G.	Please select
51.2	99.9	1.0	Contig12927_at	Contig12927	-	-	5e+0	At5g41350	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.	Please select
51.1	99.9	0.1	Contig18591_at	Contig18591	-	-	6e-1	At5g42090	-	O.I.	C.G.	H.G.	Please select
51.0	99.9	0.1	Contig23926_at	Contig23926	-	-	9e-7	At4g18570	proline-rich family protein	O.I.	C.G.	H.G.	Please select
50.9	99.9	9.3	Contig8626_at	Contig8626	-	-	3e+0	At3g05935	unknown protein	O.I.	C.G.	H.G.	Please select
50.9	99.9	3.0	Contig17776_at	Contig17776	-	-	3e-3	At5g18500	protein kinase family protein	O.I.	C.G.	H.G.	Please select
49.8	99.9	0.0	EBem09_SQ001_C09_at	EBem09_SQ001_C09	-	-	3e+1	At5g28020	CYSD2 (CYSTEINE SYNTHASE D2)	O.I.	C.G.	H.G.	Please select
47.7	99.9	0.2	EBem08_SQ001_B01_at	EBem08_SQ001_B01	-	-	2e-3	At1g15800	unknown protein	O.I.	C.G.	H.G.	Please select
46.9	99.9	1.1	Contig15584_at	Contig15584	-	-	1e-4	At3g23480	cyclopropane fatty acid synthase-related	O.I.	C.G.	H.G.	Please select
46.8	99.9	48.7	Contig1073_s_at	Contig1073	-	-	4e+0	At4g36500	unknown protein	O.I.	C.G.	H.G.	Please select
46.4	99.9	1.0	HVSMEk0003I10r2_at	HVSMEk0003I10r2	-	-	2e+1	At5g44730	haloacid dehalogenase-like hydrolase family protein	O.I.	C.G.	H.G.	Please select
46.0	99.9	5.3	Contig124_at	Contig124	-	-	1e-40	At1g09200	histone H3	O.I.	C.G.	H.G.	Please select
45.6	99.9	0.8	Contig4526_at	Contig4526	-	-	1e-1	At3g26760	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	C.G.	H.G.	Please select
45.4	99.9	8.1	HVSMEn0017G01f_s_at	HVSMEn0017G01f	-	-	3e+0	At4g29160	SNF7.1	O.I.	C.G.	H.G.	Please select
44.7	99.9	0.9	Contig11336_at	Contig11336	-	-	5e-1	At1g68220	unknown protein	O.I.	C.G.	H.G.	Please select
44.4	99.9	0.1	Contig16870_at	Contig16870	-	-	5e-11	At2g36570	leucine-rich repeat transmembrane protein kinase, putative	O.I.	C.G.	H.G.	Please select
44.1	99.9	0.7	Contig10657_at	Contig10657	-	-	2e+0	At4g33310	unknown protein	O.I.	C.G.	H.G.	Please select
44.0	99.9	0.1	Contig9202_at	Contig9202	-	-	2e-1	At4g00820	iqd17 (IQ-domain 17)	O.I.	C.G.	H.G.	Please select
43.0	99.9	6.3	Contig5322_at	Contig5322	-	-	4e-1	At5g37550	unknown protein	O.I.	C.G.	H.G.	Please select
42.8	99.9	0.3	Contig9962_at	Contig9962	-	-	1e+1	At5g65370	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	C.G.	H.G.	Please select
42.7	99.9	0.3	Contig15596_at	Contig15596	-	-	1e+0	At2g20120	COV1 (CONTINUOUS VASCULAR RING)	O.I.	C.G.	H.G.	Please select
42.7	99.9	0.1	Contig24078_at	Contig24078	-	-	4e+0	At3g27080	TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)	O.I.	C.G.	H.G.	Please select
42.5	99.9	9.6	Contig10484_at	Contig10484	-	-	6e-10	At3g24650	ABI3 (ABA INSENSITIVE 3)	O.I.	C.G.	H.G.	Please select
42.2	99.9	3.6	Contig4507_at	Contig4507	-	-	6e+0	At1g61760	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	O.I.	C.G.	H.G.	Please select
42.2	99.9	1.2	EBro02_SQ003_O24_at	EBro02_SQ003_O24	-	-	3e+0	At4g30410	transcription factor	O.I.	C.G.	H.G.	Please select
41.9	99.9	1.1	Contig20404_at	Contig20404	-	-	4e+0	At3g14850	unknown protein	O.I.	C.G.	H.G.	Please select
41.9	99.9	0.3	HX02O04u_at	HX02O04u	-	-	3e-1	At5g03030	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.	Please select
41.9	99.9	0.1	Contig17857_at	Contig17857	-	-	4e-5	At3g02600	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)	O.I.	C.G.	H.G.	Please select
41.6	99.9	0.4	HU01E06w_at	HU01E06w	-	-	5e+0	At3g24450	copper-binding family protein	O.I.	C.G.	H.G.	Please select
40.9	99.9	9.7	Contig6446_at	Contig6446	-	-	5e-1	At1g29680	unknown protein	O.I.	C.G.	H.G.	Please select
40.5	99.9	0.0	Contig16863_at	Contig16863	-	-	4e+0	At5g50080	DNA binding / transcription factor	O.I.	C.G.	H.G.	Please select
40.4	99.9	0.2	Contig19943_at	Contig19943	-	-	5e+0	At3g23167	LCR39 (Low-molecular-weight cysteine-rich 39)	O.I.	C.G.	H.G.	Please select
40.3	99.9	11.0	Contig10067_s_at	Contig10067	-	-	4e+0	At5g48920	TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)	O.I.	C.G.	H.G.	Please select
39.9	99.9	0.2	Contig12145_at	Contig12145	-	-	2e+0	At4g30070	LCR59 (Low-molecular-weight cysteine-rich 59)	O.I.	C.G.	H.G.	Please select
39.3	99.9	1.6	Contig7592_at	Contig7592	-	-	5e-1	At1g54217	Expressed protein	O.I.	C.G.	H.G.	Please select
39.3	99.9	0.5	HVSMEa0011N23r2_at	HVSMEa0011N23r2	-	-	4e+0	At1g04260	MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)	O.I.	C.G.	H.G.	Please select
39.0	99.9	0.1	HF13G16r_at	HF13G16r	-	-	4e+0	Atmg00140	-	O.I.	C.G.	H.G.	Please select
38.9	99.9	0.5	Contig9170_at	Contig9170	-	-	1e-2	At3g61490	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	C.G.	H.G.	Please select
38.3	99.9	0.4	Contig14545_at	Contig14545	-	-	7e-1	At3g47830	HhH-GPD base excision DNA repair protein-related	O.I.	C.G.	H.G.	Please select
38.2	99.9	1.1	Contig16216_at	Contig16216	-	-	6e-3	At5g55470	ATNHX3	O.I.	C.G.	H.G.	Please select
38.0	99.9	0.1	HM12K06r_at	HM12K06r	-	-	2e+1	At5g19190	unknown protein	O.I.	C.G.	H.G.	Please select
37.9	99.9	0.1	HZ47I10r_at	HZ47I10r	-	-	2e-2	At3g29070	protein transmembrane transporter	O.I.	C.G.	H.G.	Please select
37.7	99.9	2.8	Contig15741_at	Contig15741	-	-	4e-1	At5g46300	unknown protein	O.I.	C.G.	H.G.	Please select
37.5	99.9	43.0	Contig9754_at	Contig9754	-	-	5e+0	At5g18310	unknown protein	O.I.	C.G.	H.G.	Please select
37.5	99.9	4.4	Contig12999_at	Contig12999	-	-	2e+0	At1g15040	glutamine amidotransferase-related	O.I.	C.G.	H.G.	Please select
37.5	99.9	1.6	rbags8d18_s_at	rbags8d18	-	-	1e+0	At5g57510	unknown protein	O.I.	C.G.	H.G.	Please select
37.5	99.9	0.3	HW07A15u_at	HW07A15u	-	-	3e+0	At4g13195	CLE44 (CLAVATA3/ESR-RELATED 44)	O.I.	C.G.	H.G.	Please select
37.5	99.9	0.1	HM02L01u_at	HM02L01u	-	-	5e-1	At4g03060	AOP2 (ALKENYL HYDROXALKYL PRODUCING 2)	O.I.	C.G.	H.G.	Please select
37.5	99.9	0.0	Contig21354_at	Contig21354	-	-	2e+1	At5g28750	thylakoid assembly protein, putative	O.I.	C.G.	H.G.	Please select
37.3	99.9	2.1	Contig10293_at	Contig10293	-	-	6e-17	At4g27880	seven in absentia (SINA) family protein	O.I.	C.G.	H.G.	Please select
37.1	99.9	0.0	Contig22553_at	Contig22553	-	-	1e-3	At3g52910	AtGRF4 (GROWTH-REGULATING FACTOR 4)	O.I.	C.G.	H.G.	Please select
37.0	99.9	0.1	Contig16911_at	Contig16911	-	-	3e-18	At4g25540	MSH3 (Arabidopsis homolog of DNA mismatch repair protein MSH3)	O.I.	C.G.	H.G.	Please select
36.9	99.9	1.0	Contig18863_at	Contig18863	-	-	9e-1	At4g39010	AtGH9B18 (Arabidopsis thaliana glycosyl hydrolase 9B18)	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage