Microarray experiments to specifically-expressed genes

GSM ID GSM238426
Assay name Endosperm 72 h; Seed germination; Rep 1
GSE experiment GSE9365: Expression data from barley maturing and germinating grains

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
138.5100.03.7HT01A10w_atHT01A10w--5e+0At1g45243DC1 domain-containing proteinO.I.C.G.H.G.
121.3100.06.2Contig4478_atContig4478--7e-1At4g01200C2 domain-containing proteinO.I.C.G.H.G.
111.0100.019.4EBro03_SQ005_P05_atEBro03_SQ005_P05--4e+0At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.C.G.H.G.
83.0100.03.8Contig12422_atContig12422leucoanthocyanidin dioxygenase-like protein-2e+0At2g36690oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
77.9100.00.2AFFX-r2-Bs-lys-M_atAFFX-r2-Bs-lys-M--0O.I.C.G.H.G.
73.9100.00.1HT09B09u_atHT09B09u--8e-1At3g19900unknown proteinO.I.C.G.H.G.
72.5100.012.7HF13L09r_atHF13L09r--3e+0At4g10430-O.I.C.G.H.G.
66.3100.02.3AFFX-LysX-3_atAFFX-LysX-3--0O.I.C.G.H.G.
66.2100.01.8Contig2906_atContig2906--3e+0At1g04985unknown proteinO.I.C.G.H.G.
62.5100.05.6AFFX-ThrX-3_atAFFX-ThrX-3--0O.I.C.G.H.G.
61.4100.01.2AFFX-r2-Bs-phe-3_atAFFX-r2-Bs-phe-3--0O.I.C.G.H.G.
61.2100.00.4AFFX-LysX-M_atAFFX-LysX-M--0O.I.C.G.H.G.
60.6100.01.4AFFX-PheX-3_atAFFX-PheX-3--0O.I.C.G.H.G.
59.4100.014.0Contig10241_atContig10241--2e-9At1g29120unknown proteinO.I.C.G.H.G.
59.0100.05.7AFFX-r2-Bs-thr-3_s_atAFFX-r2-Bs-thr-3--0O.I.C.G.H.G.
58.8100.00.9AFFX-r2-Bs-thr-5_s_atAFFX-r2-Bs-thr-5--0O.I.C.G.H.G.
58.0100.01.9HA08e19r_atHA08e19r--5e-8At5g50460protein transport protein SEC61 gamma subunit, putativeO.I.C.G.H.G.
56.2100.03.7Contig21003_atContig21003--6e+0At5g17280unknown proteinO.I.C.G.H.G.
55.3100.04.3AFFX-r2-Bs-thr-M_s_atAFFX-r2-Bs-thr-M--0O.I.C.G.H.G.
55.3100.00.2AFFX-r2-Bs-lys-5_atAFFX-r2-Bs-lys-5--0O.I.C.G.H.G.
55.2100.026.1Contig8226_atContig8226--1e-4At4g25830integral membrane family proteinO.I.C.G.H.G.
55.0100.014.3Contig12782_atContig12782--4e-5At5g20550oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
54.0100.00.4HD08L09r_atHD08L09r--4e+0At2g40085unknown proteinO.I.C.G.H.G.
53.9100.00.6AFFX-r2-Bs-lys-3_atAFFX-r2-Bs-lys-3--0O.I.C.G.H.G.
53.5100.00.4AFFX-r2-Bs-phe-M_atAFFX-r2-Bs-phe-M--0O.I.C.G.H.G.
51.8100.017.1Contig4477_atContig4477--4e-2At4g10610CID12O.I.C.G.H.G.
51.8100.00.1AFFX-LysX-5_atAFFX-LysX-5--0O.I.C.G.H.G.
51.4100.00.0Contig17246_atContig17246--5e-3At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)O.I.C.G.H.G.
50.899.91.1Contig15975_atContig15975--4e-8At5g67110ALC (ALCATRAZ)O.I.C.G.H.G.
50.299.90.1HS06K15u_atHS06K15u--4e+0At3g17120unknown proteinO.I.C.G.H.G.
48.999.90.1Contig22151_atContig22151--5e+0At5g61530small G protein family protein / RhoGAP family proteinO.I.C.G.H.G.
47.299.942.0AFFX-DapX-3_atAFFX-DapX-3--0O.I.C.G.H.G.
45.799.90.0Contig25227_atContig25227--1e+0At5g66000unknown proteinO.I.C.G.H.G.
45.699.90.3HB08E19r_x_atHB08E19r--3e+0At5g57340unknown proteinO.I.C.G.H.G.
45.299.943.9Contig16010_atContig16010--2e+1Atmg01040-O.I.C.G.H.G.
44.699.95.8Contig4479_s_atContig4479--7e-1At4g01200C2 domain-containing proteinO.I.C.G.H.G.
44.699.90.1HF14A04r_atHF14A04r--2e+0At5g22240OFP10O.I.C.G.H.G.
44.599.90.2Contig12010_atContig12010--3e+0At4g30760unknown proteinO.I.C.G.H.G.
44.599.90.2HB04I10r_x_atHB04I10r--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.C.G.H.G.
43.999.944.2Contig6609_atContig6609--2e-4At3g17940aldose 1-epimerase family proteinO.I.C.G.H.G.
43.899.99.1AFFX-DapX-M_atAFFX-DapX-M--0O.I.C.G.H.G.
43.799.90.0HB04I10r_atHB04I10r--5e+0At5g56230PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)O.I.C.G.H.G.
43.399.95.7Contig15604_atContig15604--4e+0At3g51500unknown proteinO.I.C.G.H.G.
43.099.96.9Contig22530_atContig22530--1e+1At5g65060MAF3 (MADS AFFECTING FLOWERING 3)O.I.C.G.H.G.
42.799.90.1Contig51_atContig51--4e+0At3g13970APG12B (AUTOPHAGY 12 B)O.I.C.G.H.G.
42.699.983.4Contig19330_atContig19330--8e+0At5g23420HMGB6O.I.C.G.H.G.
41.899.90.0HD12P17r_atHD12P17r--1e-1At2g23148-O.I.C.G.H.G.
41.799.97.9AFFX-r2-Bs-dap-M_atAFFX-r2-Bs-dap-M--0O.I.C.G.H.G.
40.999.90.2HF13N11r_x_atHF13N11r--2e+0At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)O.I.C.G.H.G.
40.899.90.7AFFX-ThrX-M_atAFFX-ThrX-M--0O.I.C.G.H.G.
40.699.93.2HM11M18r_atHM11M18r--9e-1At2g27160unknown proteinO.I.C.G.H.G.
40.499.90.2AFFX-PheX-5_atAFFX-PheX-5--0O.I.C.G.H.G.
40.199.90.0HU14C15u_x_atHU14C15u--6e+0At2g30170catalyticO.I.C.G.H.G.
39.999.91.8AFFX-DapX-5_atAFFX-DapX-5--0O.I.C.G.H.G.
39.899.90.2AFFX-PheX-M_atAFFX-PheX-M--0O.I.C.G.H.G.
39.699.931.2Contig11648_atContig11648--5e-13At5g04360ATLDA (LIMIT DEXTRINASE)O.I.C.G.H.G.
38.799.910.9HU11N21r_x_atHU11N21r--2e+0At5g57340unknown proteinO.I.C.G.H.G.
38.599.90.2HD04G09u_atHD04G09u--1e+0At2g46690auxin-responsive family proteinO.I.C.G.H.G.
38.299.923.0AFFX-r2-Bs-dap-3_atAFFX-r2-Bs-dap-3--0O.I.C.G.H.G.
37.499.925.5Contig7507_atContig7507--4e-1At5g19810proline-rich extensin-like family proteinO.I.C.G.H.G.
37.199.90.1HD03A05u_atHD03A05u--4e+0At5g60360AALP (Arabidopsis aleurain-like protease)O.I.C.G.H.G.
36.799.90.4HB14P07r_atHB14P07r--6e+0At5g17810WOX12 (WUSCHEL related homeobox 12)O.I.C.G.H.G.
36.699.90.2AFFX-r2-Bs-phe-5_atAFFX-r2-Bs-phe-5--0O.I.C.G.H.G.
36.199.96.0Contig13078_s_atContig13078--3e-1At3g56710SIB1 (SIGMA FACTOR BINDING PROTEIN 1)O.I.C.G.H.G.
36.099.90.1Contig24192_atContig24192--1e+0At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.C.G.H.G.
35.099.90.1AFFX-ThrX-5_atAFFX-ThrX-5--0O.I.C.G.H.G.
34.899.94.8HB11D23r_x_atHB11D23r--2e+0At2g14110-O.I.C.G.H.G.
34.699.90.3EBem05_SQ001_F09_atEBem05_SQ001_F09--7e+0At3g26760short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
34.499.9115.5Contig8703_atContig8703--2e-42At3g21720ICL (ISOCITRATE LYASE)O.I.C.G.H.G.
34.499.933.3Contig5278_atContig5278--1e+0At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseO.I.C.G.H.G.
34.399.90.0HV10C10u_atHV10C10u--4e+0At1g61795-O.I.C.G.H.G.
34.099.90.1HZ51B11r_atHZ51B11r--9e+0At1g23440pyrrolidone-carboxylate peptidase family proteinO.I.C.G.H.G.
33.099.90.5Contig9492_atContig9492--6e-5At2g24280serine carboxypeptidase S28 family proteinO.I.C.G.H.G.
32.599.92.6Contig18774_atContig18774--3e+0At2g22860ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)O.I.C.G.H.G.
31.499.9174.1U19359_s_atU19359--1e-2At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseO.I.C.G.H.G.
31.499.92.7Contig4507_atContig4507--6e+0At1g61760harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.C.G.H.G.
31.299.91.5HM05O11r_atHM05O11r--5e-1At2g17540unknown proteinO.I.C.G.H.G.
31.099.90.8Contig25639_atContig25639--6e+0At5g48580FKBP15-2O.I.C.G.H.G.
30.899.922.4Contig15099_s_atContig15099--1e+1At5g15760plastid-specific 30S ribosomal protein 3, putative / PSRP-3, putativeO.I.C.G.H.G.
30.799.96.1Contig10893_atContig10893--7e-4At4g30610BRS1 (BRI1 SUPPRESSOR 1)O.I.C.G.H.G.
30.699.92.6HT08G04u_atHT08G04u--1e+0At5g25360unknown proteinO.I.C.G.H.G.
30.399.90.7HV12C23u_x_atHV12C23u--5e+0At5g35475-O.I.C.G.H.G.
30.399.90.4EBma03_SQ002_D19_atEBma03_SQ002_D19--1e+0At5g57391unknown proteinO.I.C.G.H.G.
30.299.90.0Contig23385_atContig23385--5e+0At5g52770heavy-metal-associated protein-relatedO.I.C.G.H.G.
29.799.90.9Contig14183_s_atContig14183--1e+0At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.C.G.H.G.
29.399.956.4HB25F09r_x_atHB25F09r--6e+0At4g36515unknown proteinO.I.C.G.H.G.
29.099.918.6HF09N12r_atHF09N12r--1e-1At5g39330unknown proteinO.I.C.G.H.G.
29.099.90.9Contig6340_atContig6340--3e+0At4g31580SRZ-22O.I.C.G.H.G.
28.999.90.2Contig9460_atContig9460--6e-1At3g14780-O.I.C.G.H.G.
28.599.864.0HV12J02u_s_atHV12J02u--2e-1At2g07678unknown proteinO.I.C.G.H.G.
28.499.82.2HS07I12u_x_atHS07I12u--3e+0At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.C.G.H.G.
28.299.8104.5Contig5281_atContig5281--1e-2At3g48340cysteine-type endopeptidase/ cysteine-type peptidaseO.I.C.G.H.G.
27.999.80.3HS07I12u_atHS07I12u--3e+0At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.C.G.H.G.
27.699.80.9Contig8098_atContig8098--8e+0At3g17365catalytic/ methyltransferaseO.I.C.G.H.G.
27.599.81.0Contig14182_atContig14182--2e+0At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.C.G.H.G.
27.299.8192.1Contig8620_atContig8620--3e-1At4g33565protein binding / zinc ion bindingO.I.C.G.H.G.
27.299.86.6HT11M09u_atHT11M09u--4e+0At3g09390MT2A (METALLOTHIONEIN 2A)O.I.C.G.H.G.
27.199.8104.7Contig49_x_atContig49--4e+0At3g05920heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
26.799.85.0Contig7617_atContig7617--7e-4At1g05000tyrosine specific protein phosphatase family proteinO.I.C.G.H.G.
26.599.813.0Contig9191_atContig9191--2e+0At2g18200unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage