Microarray experiments to specifically-expressed genes

GSM ID GSM238057
Assay name Soybean-S03W4-1-RMA
GSE experiment GSE9374: Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
661.7100.01.5GmaAffx.4970.1.S1_atBM085400--3e+0At5g26070hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
613.6100.09.6Gma.13823.2.A1_s_atCD406819--1e+1At5g64240AtMC3 (metacaspase 3)O.I.C.G.H.G.
546.6100.05.2Gma.13823.1.A1_atCD396692--2e+1At5g53210SPCH (SPEECHLESS)O.I.C.G.H.G.
422.3100.080.0GmaAffx.34785.4.S1_atBG511716--8e+0At4g19038LCR15 (Low-molecular-weight cysteine-rich 15)O.I.C.G.H.G.
390.0100.05.5Gma.9753.1.S1_atCA935006--2e+0At1g795002-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)O.I.C.G.H.G.
365.5100.014.1Gma.15781.1.A1_atCD414525--1e+0At4g13540unknown proteinO.I.C.G.H.G.
356.2100.01.6Gma.3309.1.S1_atBE821442--7e+0At5g48655zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
351.1100.00.1GmaAffx.45382.1.S1_atBG508616--2e-1At4g15765electron carrier/ monooxygenase/ oxidoreductaseO.I.C.G.H.G.
344.0100.06.7GmaAffx.24026.1.S1_atBI945352--4e-4At1g70820phosphoglucomutase, putative / glucose phosphomutase, putativeO.I.C.G.H.G.
338.2100.084.8GmaAffx.52581.1.A1_atBE824431--1e-5At1g15820LHCB6 (LIGHT HARVESTING COMPLEX PSII SUBUNIT 6)O.I.C.G.H.G.
311.9100.00.3Gma.14083.1.S1_atCD415163--1e+0At3g46060ATRAB8AO.I.C.G.H.G.
299.1100.0414.5GmaAffx.89671.1.A1_atCK605541--2e+0At3g08000RNA-binding protein, putativeO.I.C.G.H.G.
297.5100.01.2GmaAffx.43434.1.A1_atAI938306--2e+0At4g27040VPS22O.I.C.G.H.G.
277.3100.042.2Gma.12131.1.S1_atBQ628654--9e-8At4g28570alcohol oxidase-relatedO.I.C.G.H.G.
262.3100.011.3Gma.13377.2.S1_atCD409238--3e-2At1g03600photosystem II family proteinO.I.C.G.H.G.
257.0100.050.5Gma.3488.1.S1_atBQ628825--4e+0At3g27050unknown proteinO.I.C.G.H.G.
256.2100.053.9Gma.12621.1.A1_atCD395932--9e-23At5g13630GUN5 (GENOMES UNCOUPLED 5)O.I.C.G.H.G.
256.0100.00.0GmaAffx.61468.1.A1_atCD407916--2e+0At1g773301-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeO.I.C.G.H.G.
254.9100.019.6Gma.13377.1.S1_atCD408470--2e+0At2g38560TFIIS (TRANSCRIPT ELONGATION FACTOR IIS)O.I.C.G.H.G.
250.1100.021.7Gma.8034.2.S1_atCD403759--5e-4At1g74730unknown proteinO.I.C.G.H.G.
240.8100.01.4GmaAffx.68700.1.A1_atBI968049--9e+0At5g47080CKB1O.I.C.G.H.G.
238.1100.010.5Gma.1174.1.S1_atCD397033--2e-13At1g62250unknown proteinO.I.C.G.H.G.
235.4100.040.5Gma.7331.1.S1_atBU549815--6e-2At4g28080bindingO.I.C.G.H.G.
234.1100.02.6GmaAffx.26912.1.S1_atBF426213--4e-1At4g22830unknown proteinO.I.C.G.H.G.
228.5100.00.0GmaAffx.21595.1.S1_atBE059253--4e-2At5g56880unknown proteinO.I.C.G.H.G.
226.5100.02.5Gma.13407.1.A1_atCD393428--3e-9At1g64980unknown proteinO.I.C.G.H.G.
225.1100.076.9Gma.2542.1.S1_atCD409405--5e-42At4g27440PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B)O.I.C.G.H.G.
216.8100.098.9Gma.11932.1.S1_atBI095057--4e-131Atcg01050-O.I.C.G.H.G.
214.2100.03.3Gma.13196.1.A1_atCD393360--1e-7At1g07180NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)O.I.C.G.H.G.
213.9100.00.1GmaAffx.92017.1.S1_atCF807742--1e-28At1g61520LHCA3O.I.C.G.H.G.
213.3100.0123.7GmaAffx.85116.1.S1_atAW760957--7e+0At4g31700RPS6 (RIBOSOMAL PROTEIN S6)O.I.C.G.H.G.
208.8100.053.8Gma.4512.1.S1_atCD402761--5e-1At1g51400photosystem II 5 kD proteinO.I.C.G.H.G.
207.7100.03.2Gma.2446.2.S1_atBI427101--4e-12At4g27700rhodanese-like domain-containing proteinO.I.C.G.H.G.
204.5100.010.6Gma.9265.1.S1_atBU551320--6e-6At4g28700AMT1O.I.C.G.H.G.
203.7100.0125.6Gma.12078.1.S1_atAW761166--8e-3Atcg00720-O.I.C.G.H.G.
203.6100.01.2GmaAffx.81962.1.A1_atBG839129--6e-9At4g15530PPDK (pyruvate orthophosphate dikinase)O.I.C.G.H.G.
200.7100.00.1GmaAffx.61513.1.A1_atCD413665--7e-1At2g39490F-box family proteinO.I.C.G.H.G.
200.0100.079.6Gma.5472.1.A1_atBF426144--3e-28At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.C.G.H.G.
200.0100.029.7Gma.17695.1.A1_atCD411626--9e-1At4g02530chloroplast thylakoid lumen proteinO.I.C.G.H.G.
199.2100.05.0GmaAffx.12286.1.S1_atAW459370--1e+0At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.C.G.H.G.
198.7100.00.0GmaAffx.20811.1.S1_atBI968631--8e-5At4g34790auxin-responsive family proteinO.I.C.G.H.G.
198.5100.00.1Gma.15092.1.S1_s_atAI856189--9e-1At3g54890LHCA1O.I.C.G.H.G.
197.1100.02.7Gma.14014.1.A1_atCD413594--7e-1Atmg00840-O.I.C.G.H.G.
194.7100.01.2Gma.2554.1.S1_atBU548610--7e-4At4g25290DNA photolyaseO.I.C.G.H.G.
192.4100.020.0Gma.13003.1.S1_s_atCD401473--7e-3At5g66800unknown proteinO.I.C.G.H.G.
190.7100.08.5Gma.13377.2.S1_a_atCD409238--3e-2At1g03600photosystem II family proteinO.I.C.G.H.G.
190.3100.00.9GmaAffx.61867.1.S1_atAW101682--3e+0At3g14452unknown proteinO.I.C.G.H.G.
189.9100.012.7GmaAffx.33974.1.S1_atCD393945--5e-3At5g66800unknown proteinO.I.C.G.H.G.
189.9100.01.9GmaAffx.14399.2.A1_atBM270590--5e-3At1g75100JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1)O.I.C.G.H.G.
186.9100.00.5Gma.12985.1.A1_atCD397183--1e+0At1g23290RPL27ABO.I.C.G.H.G.
184.8100.04.5Gma.10458.1.A1_atCD398142--1e+0At3g23090-O.I.C.G.H.G.
183.4100.057.6Gma.4575.1.S1_atCD392826Fructose-bisphosphate aldolase (FBA)-6e-29At4g26530fructose-bisphosphate aldolase, putativeO.I.C.G.H.G.
183.0100.01.2GmaAffx.16086.1.S1_atCD418020--2e-10At5g24470APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5)O.I.C.G.H.G.
180.3100.066.9GmaAffx.55942.1.S1_atBE658601--4e+0At5g37250zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
178.7100.0141.0GmaAffx.4994.1.A1_atBI968277--7e-1At1g30475-O.I.C.G.H.G.
177.4100.01.1GmaAffx.68453.1.S1_atAW832551--1e+0At3g10190calmodulin, putativeO.I.C.G.H.G.
175.9100.01.9GmaAffx.4914.1.S1_s_atBI968080--4e+0At5g15560unknown proteinO.I.C.G.H.G.
175.1100.060.5GmaAffx.13655.1.A1_atBE657982--2e+0At1g76090SMT3 (STEROL METHYLTRANSFERASE 3)O.I.C.G.H.G.
174.3100.0118.8Gma.4613.4.S1_atCD397971--8e-3At1g67740PSBYO.I.C.G.H.G.
174.2100.0150.2GmaAffx.32256.1.S1_atBI941634--4e-6At4g37230oxygen-evolving enhancer protein, chloroplast, putative / 33 kDa subunit of oxygen evolving system of photosystem II, putativeO.I.C.G.H.G.
174.2100.03.5Gma.13107.1.A1_atCD412566--1e-13At1g44446CH1 (CHLORINA 1)O.I.C.G.H.G.
173.8100.05.4Gma.13583.1.A1_atCD401036--3e+0At5g44300dormancy/auxin associated family proteinO.I.C.G.H.G.
173.2100.0288.2GmaAffx.32146.1.A1_atBQ273585--3e-35Atcg00600-O.I.C.G.H.G.
169.2100.0293.7Gma.10987.1.S1_x_atCA800303--6e-138At2g39730RCA (RUBISCO ACTIVASE)O.I.C.G.H.G.
169.1100.08.5Gma.17852.1.A1_atAI856462--9e-1At3g53340NF-YB10 (NUCLEAR FACTOR Y, SUBUNIT B10)O.I.C.G.H.G.
168.8100.028.9Gma.9248.1.S1_atCD415715--1e-13At1g58290HEMA1O.I.C.G.H.G.
167.1100.0279.1Gma.10990.2.S1_s_atBG839022--6e-88At2g21330fructose-bisphosphate aldolase, putativeO.I.C.G.H.G.
166.9100.0323.0Gma.10892.1.S1_a_atBG839570--1e-11At3g01500CA1 (CARBONIC ANHYDRASE 1)O.I.C.G.H.G.
166.4100.0107.5Gma.13868.1.S1_atCD392333Glyceraldehyde-3-phosphate dehydrogenase B subunit-3e-142At1g42970GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT)O.I.C.G.H.G.
165.5100.01.7Gma.1471.1.S1_atBU550460--1e-11At2g46340SPA1 (SUPPRESSOR OF PHYA-105 1)O.I.C.G.H.G.
164.0100.00.1GmaAffx.79227.1.S1_atBQ628855--1e-3At1g17020SRG1 (SENESCENCE-RELATED GENE 1)O.I.C.G.H.G.
163.8100.024.3Gma.17709.1.S1_atCD413509--3e+0At3g46780PTAC16 (PLASTID TRANSCRIPTIONALLY ACTIVE 16)O.I.C.G.H.G.
163.5100.00.2GmaAffx.50635.2.S1_atAW733509--8e-1At2g29090CYP707A2O.I.C.G.H.G.
163.3100.0243.2Gma.10987.1.S1_atCA800303--6e-138At2g39730RCA (RUBISCO ACTIVASE)O.I.C.G.H.G.
161.0100.077.7Gma.10620.1.S1_atAF503360.1conversion of hydroxypyruvate to glycerate-4e-89At1g68010HPRO.I.C.G.H.G.
160.9100.01.2Gma.13454.1.A1_atCD416724--5e+0At5g16840BPA1 (BINDINGPARTNEROFACD11 1)O.I.C.G.H.G.
160.8100.07.7Gma.15872.1.A1_atCD418330--8e-1At5g05670signal recognition particle bindingO.I.C.G.H.G.
160.5100.00.1Gma.12775.1.S1_atCD406675--9e-6At3g26070plastid-lipid associated protein PAP / fibrillin family proteinO.I.C.G.H.G.
160.4100.0117.3Gma.3304.1.S1_atCD404219--3e-2At1g02710glycine-rich proteinO.I.C.G.H.G.
158.7100.072.2Gma.1764.1.S1_atAW597827--4e-66At1g06430FTSH8O.I.C.G.H.G.
158.7100.07.7Gma.13000.1.S1_atCD415111--4e-2At3g13910unknown proteinO.I.C.G.H.G.
158.6100.06.1GmaAffx.4079.1.S1_atBG154959--4e+0At5g57565protein kinase family proteinO.I.C.G.H.G.
158.0100.00.6GmaAffx.48040.1.A1_atAI959919--1e+0At3g02242unknown proteinO.I.C.G.H.G.
155.3100.05.1GmaAffx.28350.1.S1_s_atBM526544--6e-17At1g20810immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.C.G.H.G.
155.0100.0120.1GmaAffx.48156.1.A1_atAW101200--4e+0At4g13580disease resistance-responsive family proteinO.I.C.G.H.G.
154.3100.0189.6Gma.9720.1.S1_atCD413624--5e-173At3g60750transketolase, putativeO.I.C.G.H.G.
154.3100.033.3Gma.2446.1.S1_a_atCD393550--3e-27At4g27700rhodanese-like domain-containing proteinO.I.C.G.H.G.
154.0100.00.8Gma.15430.1.A1_atCD404233--3e-1At1g15790unknown proteinO.I.C.G.H.G.
153.9100.0116.1Gma.10892.5.S1_atCD416264--2e-4At3g01500CA1 (CARBONIC ANHYDRASE 1)O.I.C.G.H.G.
152.3100.0188.5Gma.8333.1.S1_atCD405063--1e-10At2g47400CP12-1O.I.C.G.H.G.
152.1100.07.0GmaAffx.1647.2.A1_s_atCD395936--2e-1At4g12830hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
150.5100.0203.3GmaAffx.32277.1.S1_atAI495819--7e-9Atcg00070-O.I.C.G.H.G.
150.3100.0255.6Gma.10867.1.S1_atCD418576--1e-85At5g54270LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)O.I.C.G.H.G.
150.3100.021.4Gma.13395.1.A1_s_atCD404800--4e-9At1g19150LHCA6O.I.C.G.H.G.
150.2100.0133.8Gma.4613.4.S1_x_atCD397971--8e-3At1g67740PSBYO.I.C.G.H.G.
149.8100.00.4Gma.17148.1.S1_atBE023908--2e+0At5g50750RGP4 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4)O.I.C.G.H.G.
149.6100.074.1Gma.2503.1.S1_atAF503361.1oxidoreductase-6e-94At1g68010HPRO.I.C.G.H.G.
148.7100.0137.7GmaAffx.80986.1.S1_s_atBU089770--4e-47At5g61410RPEO.I.C.G.H.G.
147.3100.00.7Gma.5386.1.A1_atBM093925--4e+0At5g22370QQT1 (QUATRE-QUART 1)O.I.C.G.H.G.
146.5100.072.6Gma.10574.1.S1_atCD415419--1e-8At2g04570GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.



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