CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM237282

Assay name Root Selenate rep 1

GSE experiment GSE9311: Gene expression in roots and shoots of plants grown on selenate

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
118.7 99.9 39.1 At5g52020 835277 AP2 domain-containing protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
91.1 99.9 159.9 At2g44460 819053 BGLU28 (BETA GLUCOSIDASE 28) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA O.I. C.G. H.G.
64.9 99.8 38.1 At2g25460 817084 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
63.3 99.8 33.7 At3g28320 822460 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
60.4 99.8 27.6 At1g60750 3767587 oxidoreductase F:oxidoreductase activity;P:oxidation reduction;C:unknown O.I. C.G. H.G.
60.2 99.8 58.0 At3g26460 822251 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
57.0 99.8 128.1 At5g38020 833781 S-adenosyl-L-methionine:carboxyl methyltransferase family protein encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus) O.I. C.G. H.G.
50.8 99.8 326.5 At1g21310 838728 ATEXT3 (EXTENSIN 3) Encodes extensin 3. O.I. C.G. H.G.
45.0 99.8 50.7 At2g36120 3768574 DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1) Encodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects. O.I. C.G. H.G.
39.4 99.8 21.3 At3g28310 822458 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.3 99.7 111.5 At3g44320 823557 NIT3 (NITRILASE 3) This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways. O.I. C.G. H.G.
36.8 99.7 35.6 At5g44350 834461 ethylene-responsive nuclear protein -related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
35.1 99.7 45.1 At4g08620 826426 SULTR1 High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane. O.I. C.G. H.G.
33.5 99.7 96.1 At5g26220 832691 ChaC-like family protein F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP O.I. C.G. H.G.
29.6 99.7 136.7 At4g27652 828877 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
28.6 99.7 16.3 At4g20820 827830 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:unknown;FBPOAM O.I. C.G. H.G.
26.8 99.7 24.7 At1g24430 839059 transferase/ transferase, transferring acyl groups other than amino-acyl groups F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PF O.I. C.G. H.G.
25.9 99.7 77.3 At4g27654 828878 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
24.5 99.6 92.7 At2g25810 817123 TIP4 F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFA O.I. C.G. H.G.
24.4 99.6 128.5 At4g33420 829479 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;PFOBM O.I. C.G. H.G.
24.3 99.6 101.6 At2g42760 818876 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
24.3 99.6 40.5 At3g05400 819704 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA O.I. C.G. H.G.
23.2 99.6 34.3 At1g66800 842998 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase O.I. C.G. H.G.
22.7 99.6 115.7 At2g35930 818166 PUB23 (PLANT U-BOX 23) Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. O.I. C.G. H.G.
22.3 99.6 43.8 At5g63590 836478 FLS3 (FLAVONOL SYNTHASE 3) F:flavonol synthase activity;P:response to light stimulus, response to sucrose stimulus, flavonoid biosynthetic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
21.1 99.6 26.1 At1g14480 838010 protein binding F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
20.8 99.6 237.0 At2g05440 815093 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
20.6 99.6 84.4 At4g19030 827641 NLM1 an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance. O.I. C.G. H.G.
20.5 99.6 52.7 At5g38030 833782 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM O.I. C.G. H.G.
19.6 99.6 102.9 At1g11670 837711 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
19.6 99.6 80.7 At2g18210 816336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
18.3 99.5 146.5 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
18.2 99.5 99.6 At5g48010 834852 THAS1 (THALIANOL SYNTHASE 1) Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism. O.I. C.G. H.G.
17.5 99.5 46.4 At4g28940 829015 catalytic F:catalytic activity;P:nucleoside metabolic process;C:endomembrane system;BPO O.I. C.G. H.G.
17.1 99.5 213.2 At4g04830 825820 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein F:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAV O.I. C.G. H.G.
17.1 99.5 72.3 At5g49280 834988 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVA O.I. C.G. H.G.
17.1 99.5 48.9 At5g24590 832530 - - O.I. C.G. H.G.
17.0 99.5 80.3 At1g73540 843688 atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21) F:hydrolase activity;P:biological_process unknown;C:chloroplast;BMPOFA O.I. C.G. H.G.
16.9 99.5 130.6 At5g22630 832326 ADT5 (arogenate dehydratase 5) Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. O.I. C.G. H.G.
16.8 99.5 13.5 At3g55370 824703 OBP3 (OBF-BINDING PROTEIN 3) Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots. O.I. C.G. H.G.
16.6 99.5 116.8 At3g58550 825024 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:anchored to membrane;P O.I. C.G. H.G.
16.5 99.5 69.7 At5g37990 833778 S-adenosylmethionine-dependent methyltransferase/ methyltransferase F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMF O.I. C.G. H.G.
16.4 99.5 126.3 At5g59550 836074 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVB O.I. C.G. H.G.
16.0 99.5 15.4 At1g51340 841557 MATE efflux family protein F:drug transporter activity, antiporter activity;P:multidrug transport;C:endomembrane system, membrane;BOAPFM O.I. C.G. H.G.
15.9 99.5 55.3 At2g41480 818746 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBM O.I. C.G. H.G.
15.9 99.5 25.4 At3g12520 820431 SULTR4 Encodes a sulfate transporter that in induced under sulfate limitation. O.I. C.G. H.G.
15.8 99.5 60.0 At3g26470 822252 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.6 99.5 63.4 At3g06390 819813 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.6 99.5 40.7 At3g01260 821171 aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA O.I. C.G. H.G.
15.6 99.5 33.4 At5g17350 831601 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
15.5 99.5 196.8 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF O.I. C.G. H.G.
15.5 99.5 76.9 At4g29270 829048 acid phosphatase class B family protein F:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBO O.I. C.G. H.G.
15.5 99.5 24.5 At1g53830 841820 ATPME2 encodes a pectin methylesterase O.I. C.G. H.G.
15.3 99.4 34.9 At3g16860 820941 COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR) F:unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
15.1 99.4 51.6 At4g30460 829169 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
14.7 99.4 234.6 At1g19180 838501 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. O.I. C.G. H.G.
14.5 99.4 39.5 At2g46740 819287 FAD-binding domain-containing protein F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA O.I. C.G. H.G.
14.4 99.4 343.2 At1g70850 843422 MLP34 (MLP-LIKE PROTEIN 34) F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
14.4 99.4 19.0 At5g37950 833774 transferase, transferring hexosyl groups F:transferase activity, transferring hexosyl groups;P:metabolic process;C:unknown;PMVFOB O.I. C.G. H.G.
14.3 99.4 128.3 At4g11280 826730 ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family O.I. C.G. H.G.
14.0 99.4 254.8 At2g01520 814681 MLP328 (MLP-LIKE PROTEIN 328) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P O.I. C.G. H.G.
14.0 99.4 174.9 At4g38080 829964 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA O.I. C.G. H.G.
13.6 99.4 24.0 At1g69050 843237 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.5 99.4 106.3 At2g27080 817250 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.5 99.4 12.0 At5g59510 836070 RTFL5 (ROTUNDIFOLIA LIKE 5) F:molecular_function unknown;P:shoot development;C:cellular_component unknown;PMFOB O.I. C.G. H.G.
13.4 99.4 52.0 At2g29490 817498 ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
13.3 99.4 170.9 At3g14940 820723 ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3) One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques. O.I. C.G. H.G.
13.3 99.4 113.3 At5g59520 836071 ZIP2 encodes a metal ion transporter whose expression is regulated by copper. O.I. C.G. H.G.
13.2 99.4 43.5 At3g28550 822485 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFBOVA O.I. C.G. H.G.
13.2 99.4 35.0 At4g31330 829260 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO O.I. C.G. H.G.
13.1 99.4 102.7 At3g25190 822112 nodulin, putative F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFA O.I. C.G. H.G.
13.0 99.4 34.3 At5g18840 832002 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA O.I. C.G. H.G.
12.9 99.3 49.8 At2g22510 816784 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA O.I. C.G. H.G.
12.8 99.3 232.7 At4g21850 828273 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein F:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAV O.I. C.G. H.G.
12.8 99.3 66.6 At3g03050 821148 CSLD3 (CELLULOSE SYNTHASE-LIKE D3) encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide. O.I. C.G. H.G.
12.8 99.3 63.0 At3g62260 825399 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA O.I. C.G. H.G.
12.8 99.3 5.9 At1g60020 3767574 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
12.7 99.3 146.9 At4g24570 828559 mitochondrial substrate carrier family protein F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
12.2 99.3 28.6 At3g59690 825138 IQD13 (IQ-domain 13) F:calmodulin binding;P:unknown;C:plasma membrane;POMVFB O.I. C.G. H.G.
12.2 99.3 8.4 At5g25620 832638 YUC6 (YUCCA6) F:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:auxin biosynthetic process;C:unknown;BOFMPA O.I. C.G. H.G.
12.1 99.3 88.3 At1g23720 838982 proline-rich extensin-like family protein F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA O.I. C.G. H.G.
12.0 99.3 295.4 At1g48750 841297 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
12.0 99.3 47.2 At5g23050 832369 AAE17 (ACYL-ACTIVATING ENZYME 17) F:catalytic activity, ligase activity;P:metabolic process;C:cellular_component unknown;BOMFAP O.I. C.G. H.G.
11.9 99.3 14.9 At1g07260 837237 UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
11.8 99.3 25.3 At5g65970 836727 MLO10 (MILDEW RESISTANCE LOCUS O 10) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s O.I. C.G. H.G.
11.6 99.3 22.0 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
11.6 99.3 18.7 At1g35250 840414 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPA O.I. C.G. H.G.
11.4 99.3 196.3 At4g16260 827320 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;PO O.I. C.G. H.G.
11.4 99.3 70.9 At3g62270 825400 anion exchange family protein F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV O.I. C.G. H.G.
11.4 99.3 63.5 At2g34600 818025 JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7) F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P O.I. C.G. H.G.
11.4 99.3 21.0 At5g38700 833860 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
11.3 99.3 98.5 At1g18980 838479 germin-like protein, putative F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFO O.I. C.G. H.G.
11.3 99.3 69.6 At1g23730 838983 BCA3 (BETA CARBONIC ANHYDRASE 4) F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:cytosol, plasma membrane, membrane;BOPFMA O.I. C.G. H.G.
11.3 99.3 17.0 At5g37940 833773 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPA O.I. C.G. H.G.
11.2 99.2 78.2 At3g23430 821924 PHO1 (phosphate 1) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. O.I. C.G. H.G.
11.2 99.2 28.4 At5g05160 830398 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA O.I. C.G. H.G.
11.1 99.2 135.3 At4g09030 826482 AGP10 (ARABINOGALACTAN PROTEIN 10) Encodes arabinogalactan protein (AGP10). O.I. C.G. H.G.
11.1 99.2 67.9 At3g19580 821495 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2) Encodes zinc finger protein. mRNA levels are upregulated in response to ABA, high salt, and mild dessication. The protein is localized to the nucleus and acts as a transcriptional repressor. O.I. C.G. H.G.
11.0 99.2 22.0 At1g12610 837817 DDF1 (DWARF AND DELAYED FLOWERING 1) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. O.I. C.G. H.G.
10.9 99.2 264.4 At1g66270 842944 BGLU21 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
118.7	99.9	39.1	At5g52020	835277	AP2 domain-containing protein	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
91.1	99.9	159.9	At2g44460	819053	BGLU28 (BETA GLUCOSIDASE 28)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA	O.I.	C.G.	H.G.
64.9	99.8	38.1	At2g25460	817084	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
63.3	99.8	33.7	At3g28320	822460	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
60.4	99.8	27.6	At1g60750	3767587	oxidoreductase	F:oxidoreductase activity;P:oxidation reduction;C:unknown	O.I.	C.G.	H.G.
60.2	99.8	58.0	At3g26460	822251	major latex protein-related / MLP-related	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
57.0	99.8	128.1	At5g38020	833781	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)	O.I.	C.G.	H.G.
50.8	99.8	326.5	At1g21310	838728	ATEXT3 (EXTENSIN 3)	Encodes extensin 3.	O.I.	C.G.	H.G.
45.0	99.8	50.7	At2g36120	3768574	DOT1 (DEFECTIVELY ORGANIZED TRIBUTARIES 1)	Encodes a glycine rich protein that is involved in leaf vascular patterning. dot1 mutants have an aberrant open-class venation pattern in leaves and cotyledons, as well as several other leaf development defects.	O.I.	C.G.	H.G.
39.4	99.8	21.3	At3g28310	822458	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.3	99.7	111.5	At3g44320	823557	NIT3 (NITRILASE 3)	This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.	O.I.	C.G.	H.G.
36.8	99.7	35.6	At5g44350	834461	ethylene-responsive nuclear protein -related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
35.1	99.7	45.1	At4g08620	826426	SULTR1	High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane.	O.I.	C.G.	H.G.
33.5	99.7	96.1	At5g26220	832691	ChaC-like family protein	F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP	O.I.	C.G.	H.G.
29.6	99.7	136.7	At4g27652	828877	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
28.6	99.7	16.3	At4g20820	827830	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:unknown;FBPOAM	O.I.	C.G.	H.G.
26.8	99.7	24.7	At1g24430	839059	transferase/ transferase, transferring acyl groups other than amino-acyl groups	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
25.9	99.7	77.3	At4g27654	828878	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
24.5	99.6	92.7	At2g25810	817123	TIP4	F:water channel activity;P:transport;C:integral to membrane, membrane;BPMOFA	O.I.	C.G.	H.G.
24.4	99.6	128.5	At4g33420	829479	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;PFOBM	O.I.	C.G.	H.G.
24.3	99.6	101.6	At2g42760	818876	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
24.3	99.6	40.5	At3g05400	819704	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA	O.I.	C.G.	H.G.
23.2	99.6	34.3	At1g66800	842998	cinnamyl-alcohol dehydrogenase family / CAD family	similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase	O.I.	C.G.	H.G.
22.7	99.6	115.7	At2g35930	818166	PUB23 (PLANT U-BOX 23)	Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	H.G.
22.3	99.6	43.8	At5g63590	836478	FLS3 (FLAVONOL SYNTHASE 3)	F:flavonol synthase activity;P:response to light stimulus, response to sucrose stimulus, flavonoid biosynthetic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
21.1	99.6	26.1	At1g14480	838010	protein binding	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
20.8	99.6	237.0	At2g05440	815093	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
20.6	99.6	84.4	At4g19030	827641	NLM1	an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.	O.I.	C.G.	H.G.
20.5	99.6	52.7	At5g38030	833782	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM	O.I.	C.G.	H.G.
19.6	99.6	102.9	At1g11670	837711	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
19.6	99.6	80.7	At2g18210	816336	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
18.3	99.5	146.5	At4g34410	829591	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
18.2	99.5	99.6	At5g48010	834852	THAS1 (THALIANOL SYNTHASE 1)	Encodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.	O.I.	C.G.	H.G.
17.5	99.5	46.4	At4g28940	829015	catalytic	F:catalytic activity;P:nucleoside metabolic process;C:endomembrane system;BPO	O.I.	C.G.	H.G.
17.1	99.5	213.2	At4g04830	825820	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	F:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAV	O.I.	C.G.	H.G.
17.1	99.5	72.3	At5g49280	834988	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;MPFOBVA	O.I.	C.G.	H.G.
17.1	99.5	48.9	At5g24590	832530	-	-	O.I.	C.G.	H.G.
17.0	99.5	80.3	At1g73540	843688	atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21)	F:hydrolase activity;P:biological_process unknown;C:chloroplast;BMPOFA	O.I.	C.G.	H.G.
16.9	99.5	130.6	At5g22630	832326	ADT5 (arogenate dehydratase 5)	Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identiﬁed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].	O.I.	C.G.	H.G.
16.8	99.5	13.5	At3g55370	824703	OBP3 (OBF-BINDING PROTEIN 3)	Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.	O.I.	C.G.	H.G.
16.6	99.5	116.8	At3g58550	825024	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:anchored to membrane;P	O.I.	C.G.	H.G.
16.5	99.5	69.7	At5g37990	833778	S-adenosylmethionine-dependent methyltransferase/ methyltransferase	F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:endomembrane system;POBMF	O.I.	C.G.	H.G.
16.4	99.5	126.3	At5g59550	836074	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFVB	O.I.	C.G.	H.G.
16.0	99.5	15.4	At1g51340	841557	MATE efflux family protein	F:drug transporter activity, antiporter activity;P:multidrug transport;C:endomembrane system, membrane;BOAPFM	O.I.	C.G.	H.G.
15.9	99.5	55.3	At2g41480	818746	electron carrier/ heme binding / peroxidase	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:unknown;POFBM	O.I.	C.G.	H.G.
15.9	99.5	25.4	At3g12520	820431	SULTR4	Encodes a sulfate transporter that in induced under sulfate limitation.	O.I.	C.G.	H.G.
15.8	99.5	60.0	At3g26470	822252	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.6	99.5	63.4	At3g06390	819813	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.6	99.5	40.7	At3g01260	821171	aldose 1-epimerase/ carbohydrate binding / catalytic/ isomerase	F:carbohydrate binding, isomerase activity, aldose 1-epimerase activity, catalytic activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;OBMFPVA	O.I.	C.G.	H.G.
15.6	99.5	33.4	At5g17350	831601	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.5	99.5	196.8	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	O.I.	C.G.	H.G.
15.5	99.5	76.9	At4g29270	829048	acid phosphatase class B family protein	F:acid phosphatase activity;P:biological_process unknown;C:endomembrane system;PBO	O.I.	C.G.	H.G.
15.5	99.5	24.5	At1g53830	841820	ATPME2	encodes a pectin methylesterase	O.I.	C.G.	H.G.
15.3	99.4	34.9	At3g16860	820941	COBL8 (COBRA-LIKE PROTEIN 8 PRECURSOR)	F:unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
15.1	99.4	51.6	At4g30460	829169	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
14.7	99.4	234.6	At1g19180	838501	JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)	JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.	O.I.	C.G.	H.G.
14.5	99.4	39.5	At2g46740	819287	FAD-binding domain-containing protein	F:oxidoreductase activity, D-arabinono-1,4-lactone oxidase activity, FAD binding, catalytic activity;P:unknown;C:cell wall;BOFPMA	O.I.	C.G.	H.G.
14.4	99.4	343.2	At1g70850	843422	MLP34 (MLP-LIKE PROTEIN 34)	F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.4	99.4	19.0	At5g37950	833774	transferase, transferring hexosyl groups	F:transferase activity, transferring hexosyl groups;P:metabolic process;C:unknown;PMVFOB	O.I.	C.G.	H.G.
14.3	99.4	128.3	At4g11280	826730	ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6)	encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family	O.I.	C.G.	H.G.
14.0	99.4	254.8	At2g01520	814681	MLP328 (MLP-LIKE PROTEIN 328)	F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P	O.I.	C.G.	H.G.
14.0	99.4	174.9	At4g38080	829964	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFA	O.I.	C.G.	H.G.
13.6	99.4	24.0	At1g69050	843237	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.5	99.4	106.3	At2g27080	817250	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.5	99.4	12.0	At5g59510	836070	RTFL5 (ROTUNDIFOLIA LIKE 5)	F:molecular_function unknown;P:shoot development;C:cellular_component unknown;PMFOB	O.I.	C.G.	H.G.
13.4	99.4	52.0	At2g29490	817498	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
13.3	99.4	170.9	At3g14940	820723	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques.	O.I.	C.G.	H.G.
13.3	99.4	113.3	At5g59520	836071	ZIP2	encodes a metal ion transporter whose expression is regulated by copper.	O.I.	C.G.	H.G.
13.2	99.4	43.5	At3g28550	822485	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPFBOVA	O.I.	C.G.	H.G.
13.2	99.4	35.0	At4g31330	829260	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO	O.I.	C.G.	H.G.
13.1	99.4	102.7	At3g25190	822112	nodulin, putative	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOPFA	O.I.	C.G.	H.G.
13.0	99.4	34.3	At5g18840	832002	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA	O.I.	C.G.	H.G.
12.9	99.3	49.8	At2g22510	816784	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POMBVFA	O.I.	C.G.	H.G.
12.8	99.3	232.7	At4g21850	828273	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	F:peptide-methionine-(S)-S-oxide reductase activity;P:biological_process unknown;C:cellular_component unknown;OBMPFAV	O.I.	C.G.	H.G.
12.8	99.3	66.6	At3g03050	821148	CSLD3 (CELLULOSE SYNTHASE-LIKE D3)	encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.	O.I.	C.G.	H.G.
12.8	99.3	63.0	At3g62260	825399	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA	O.I.	C.G.	H.G.
12.8	99.3	5.9	At1g60020	3767574	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
12.7	99.3	146.9	At4g24570	828559	mitochondrial substrate carrier family protein	F:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
12.2	99.3	28.6	At3g59690	825138	IQD13 (IQ-domain 13)	F:calmodulin binding;P:unknown;C:plasma membrane;POMVFB	O.I.	C.G.	H.G.
12.2	99.3	8.4	At5g25620	832638	YUC6 (YUCCA6)	F:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:auxin biosynthetic process;C:unknown;BOFMPA	O.I.	C.G.	H.G.
12.1	99.3	88.3	At1g23720	838982	proline-rich extensin-like family protein	F:structural constituent of cell wall;P:plant-type cell wall organization;C:unknown;MBFOPVA	O.I.	C.G.	H.G.
12.0	99.3	295.4	At1g48750	841297	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
12.0	99.3	47.2	At5g23050	832369	AAE17 (ACYL-ACTIVATING ENZYME 17)	F:catalytic activity, ligase activity;P:metabolic process;C:cellular_component unknown;BOMFAP	O.I.	C.G.	H.G.
11.9	99.3	14.9	At1g07260	837237	UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
11.8	99.3	25.3	At5g65970	836727	MLO10 (MILDEW RESISTANCE LOCUS O 10)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO10 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO8, and AtMLO9. The gene is expressed in root and cotyledon vascular system, in root-shoot junction and lateral root primordia and in developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s	O.I.	C.G.	H.G.
11.6	99.3	22.0	At5g15130	831365	WRKY72	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
11.6	99.3	18.7	At1g35250	840414	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPA	O.I.	C.G.	H.G.
11.4	99.3	196.3	At4g16260	827320	catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;PO	O.I.	C.G.	H.G.
11.4	99.3	70.9	At3g62270	825400	anion exchange family protein	F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV	O.I.	C.G.	H.G.
11.4	99.3	63.5	At2g34600	818025	JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7)	F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.4	99.3	21.0	At5g38700	833860	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
11.3	99.3	98.5	At1g18980	838479	germin-like protein, putative	F:manganese ion binding, nutrient reservoir activity;P:biological_process unknown;C:endomembrane system, apoplast;PBFO	O.I.	C.G.	H.G.
11.3	99.3	69.6	At1g23730	838983	BCA3 (BETA CARBONIC ANHYDRASE 4)	F:carbonate dehydratase activity, zinc ion binding;P:carbon utilization;C:cytosol, plasma membrane, membrane;BOPFMA	O.I.	C.G.	H.G.
11.3	99.3	17.0	At5g37940	833773	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress;C:unknown;BOMFPA	O.I.	C.G.	H.G.
11.2	99.2	78.2	At3g23430	821924	PHO1 (phosphate 1)	mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains.	O.I.	C.G.	H.G.
11.2	99.2	28.4	At5g05160	830398	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
11.1	99.2	135.3	At4g09030	826482	AGP10 (ARABINOGALACTAN PROTEIN 10)	Encodes arabinogalactan protein (AGP10).	O.I.	C.G.	H.G.
11.1	99.2	67.9	At3g19580	821495	AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2)	Encodes zinc finger protein. mRNA levels are upregulated in response to ABA, high salt, and mild dessication. The protein is localized to the nucleus and acts as a transcriptional repressor.	O.I.	C.G.	H.G.
11.0	99.2	22.0	At1g12610	837817	DDF1 (DWARF AND DELAYED FLOWERING 1)	Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.	O.I.	C.G.	H.G.
10.9	99.2	264.4	At1g66270	842944	BGLU21	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA	O.I.	C.G.	H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage

GSM ID	GSM237282
Assay name	Root Selenate rep 1
GSE experiment	GSE9311: Gene expression in roots and shoots of plants grown on selenate

Microarray experiments to specifically-expressed genes

GSM ID GSM237282 Assay name Root Selenate rep 1 GSE experiment GSE9311: Gene expression in roots and shoots of plants grown on selenate

GSM ID GSM237282

Assay name Root Selenate rep 1

GSE experiment GSE9311: Gene expression in roots and shoots of plants grown on selenate