CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM207565

Assay name Mudanjiang8 wild type control rep1

GSE experiment GSE8380: Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
76.9 99.9 5.9 Os03g0679800 AK060719.1 - TPR-like domain containing protein 2e-1 At2g23320 WRKY15 O.I. C.G. H.G.
44.9 99.9 2.5 Os10g0186800 9638.m00950 - Nucleic acid-binding OB-fold domain containingprotein 8e+0 At5g55940 emb2731 (embryo defective 2731) O.I. C.G. H.G.
42.6 99.9 92.8 Os01g0922700 9629.m06891 - Hypothetical protein 7e-2 At1g27760 interferon-related developmental regulator family protein / IFRD protein family O.I. C.G. H.G.
41.6 99.9 11.7 Os08g0545700 9636.m04401 - TraB determinant family protein 6e-1 At5g52030 TraB protein-related O.I. C.G. H.G.
32.8 99.8 14.1 Os02g0533200 9630.m03134 - SOUL heme-binding protein family protein 1e-1 At5g65495 unknown protein O.I. C.G. H.G.
32.5 99.8 40.0 Os04g0675400 AK068186.1 - Heat shock protein DnaJ family protein 9e-1 At2g28710 zinc finger (C2H2 type) family protein O.I. C.G. H.G.
32.3 99.8 74.5 Os07g0489800 AK068191.1 - Ferredoxin domain containing protein 5e-1 At3g16250 NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1) O.I. C.G. H.G.
30.5 99.7 3.1 Os01g0635200 AK112054.1 - Myb, DNA-binding domain containing protein 4e+0 At5g51130 methyltransferase O.I. C.G. H.G.
29.6 99.7 13.8 Os03g0708500 9631.m04889 - Viral coat and capsid protein family protein 7e-3 At1g73655 FK506 binding / peptidyl-prolyl cis-trans isomerase O.I. C.G. H.G.
29.6 99.7 5.1 Os01g0893400 NM_190241.1 - BTB/POZ domain containing protein 4e-3 At1g05690 BT3 (BTB AND TAZ DOMAIN PROTEIN 3) O.I. C.G. H.G.
29.5 99.7 3.0 Os02g0774100 9630.m05279 - Thioredoxin-related domain containing protein 4e-3 At5g06690 WCRKC1 (WCRKC THIOREDOXIN 1) O.I. C.G. H.G.
29.5 99.7 1.6 Os09g0485800 AK108749.1 - Hypothetical protein 1e+0 At5g33390 glycine-rich protein O.I. C.G. H.G.
29.3 99.7 4.1 Os01g0343500 AK071988.1 - TPR repeat containing protein 9e-10 At3g05625 binding O.I. C.G. H.G.
27.9 99.6 1.5 Os05g0590300 AK067788.1 - Esterase/lipase/thioesterase domain containingprotein 6e-1 At3g02460 plant adhesion molecule, putative O.I. C.G. H.G.
27.8 99.6 54.5 Os08g0425200 AK099569.1 - Conserved hypothetical protein 1e-1 At4g11870 unknown protein O.I. C.G. H.G.
26.5 99.5 4.0 Os02g0677600 AK068106.1 - Conserved hypothetical protein 2e+0 At5g54740 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein O.I. C.G. H.G.
25.7 99.5 1.7 Os10g0498300 AK060338.1 - Epoxide hydrolase 2e+0 At5g59870 HTA6 O.I. C.G. H.G.
24.7 99.4 47.9 Os12g0493900 AK121028.1 - ARM repeat fold domain containing protein 4e-3 At1g30475 - O.I. C.G. H.G.
24.2 99.4 7.2 Os01g0784700 AY327041.1 - Receptor-like kinase 2e-6 At4g21380 ARK3 (A. THALIANA RECEPTOR KINASE 3) O.I. C.G. H.G.
24.0 99.4 18.6 Os04g0103800 AK110629.1 - Conserved hypothetical protein 2e+0 At5g65480 unknown protein O.I. C.G. H.G.
23.7 99.4 14.5 Os03g0748300 AK068519.1 - Galactose mutarotase-like domain containingprotein 5e-2 At3g15780 unknown protein O.I. C.G. H.G.
22.6 99.3 3.3 Os08g0508500 AU222529 - Peptidase aspartic family protein 3e+0 At4g10280 - O.I. C.G. H.G.
22.5 99.3 14.7 Os02g0751600 AK072946.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 4e-2 At5g03030 DNAJ heat shock N-terminal domain-containing protein O.I. C.G. H.G.
21.9 99.3 3.0 Os05g0464300 AK062470.1 - Conserved hypothetical protein 3e-1 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) O.I. C.G. H.G.
21.3 99.2 1.2 Os04g0481300 AK067096.1 - Generic methyltransferase domain containingprotein 1e-1 At3g01660 methyltransferase O.I. C.G. H.G.
21.3 99.2 1.0 Os04g0514500 AK073502.1 - TPR-like domain containing protein 6e-4 At2g13600 pentatricopeptide (PPR) repeat-containing protein O.I. C.G. H.G.
20.5 99.1 3.9 Os01g0272800 NM_188072.1 - Conserved hypothetical protein 6e-1 At3g58710 WRKY69 O.I. C.G. H.G.
20.4 99.1 24.2 Os07g0170200 CB656315 - HNH endonuclease domain containing protein 6e-13 At2g23840 HNH endonuclease domain-containing protein O.I. C.G. H.G.
20.2 99.1 74.7 Os01g0730500 AK100064.1 - Heat shock protein DnaJ family protein 2e-10 At2g42750 DNAJ heat shock N-terminal domain-containing protein O.I. C.G. H.G.
20.1 99.1 26.0 Os01g0730800 AK070733.1 - Mpv17/PMP22 family protein 3e+0 At4g05070 unknown protein O.I. C.G. H.G.
19.9 99.1 4.6 Os03g0158300 AK066591.1 - Conserved hypothetical protein 3e+0 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein O.I. C.G. H.G.
19.8 99.1 45.1 Os04g0119000 AK120328.1 - Conserved hypothetical protein 2e+0 At3g17710 F-box family protein O.I. C.G. H.G.
19.8 99.1 5.2 Os01g0323300 CA760263 - Conserved hypothetical protein 3e-1 At1g54200 unknown protein O.I. C.G. H.G.
19.8 99.1 5.1 Os01g0101200 AK067866.1 - - 5e-4 At5g40405 - O.I. C.G. H.G.
19.6 99.1 1.5 Os03g0271100 AB095095.1 - Sigma factor SIG2B 4e-3 At1g08540 SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2) O.I. C.G. H.G.
19.3 99.0 4.8 Os11g0605100 AK065824.1 - Disease resistance protein family protein 4e-1 At5g15850 COL1 (constans-like 1) O.I. C.G. H.G.
19.3 99.0 1.0 Os11g0544000 AK066017.1 - - 7e-2 At1g19990 unknown protein O.I. C.G. H.G.
19.1 99.0 19.3 Os03g0679700 AK120238.1 - Thiamine biosynthesis protein thiC 3e-125 At2g29630 THIC (ThiaminC) O.I. C.G. H.G.
19.1 99.0 2.0 Os02g0129300 AK065700.1 - Conserved hypothetical protein 1e-8 At5g48790 unknown protein O.I. C.G. H.G.
19.0 99.0 3.2 Os04g0525000 AK067753.1 - Conserved hypothetical protein 6e-1 At5g37474 - O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
76.9	99.9	5.9	Os03g0679800	AK060719.1	-	TPR-like domain containing protein	2e-1	At2g23320	WRKY15	O.I.	C.G.	H.G.
44.9	99.9	2.5	Os10g0186800	9638.m00950	-	Nucleic acid-binding OB-fold domain containingprotein	8e+0	At5g55940	emb2731 (embryo defective 2731)	O.I.	C.G.	H.G.
42.6	99.9	92.8	Os01g0922700	9629.m06891	-	Hypothetical protein	7e-2	At1g27760	interferon-related developmental regulator family protein / IFRD protein family	O.I.	C.G.	H.G.
41.6	99.9	11.7	Os08g0545700	9636.m04401	-	TraB determinant family protein	6e-1	At5g52030	TraB protein-related	O.I.	C.G.	H.G.
32.8	99.8	14.1	Os02g0533200	9630.m03134	-	SOUL heme-binding protein family protein	1e-1	At5g65495	unknown protein	O.I.	C.G.	H.G.
32.5	99.8	40.0	Os04g0675400	AK068186.1	-	Heat shock protein DnaJ family protein	9e-1	At2g28710	zinc finger (C2H2 type) family protein	O.I.	C.G.	H.G.
32.3	99.8	74.5	Os07g0489800	AK068191.1	-	Ferredoxin domain containing protein	5e-1	At3g16250	NDF4 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)	O.I.	C.G.	H.G.
30.5	99.7	3.1	Os01g0635200	AK112054.1	-	Myb, DNA-binding domain containing protein	4e+0	At5g51130	methyltransferase	O.I.	C.G.	H.G.
29.6	99.7	13.8	Os03g0708500	9631.m04889	-	Viral coat and capsid protein family protein	7e-3	At1g73655	FK506 binding / peptidyl-prolyl cis-trans isomerase	O.I.	C.G.	H.G.
29.6	99.7	5.1	Os01g0893400	NM_190241.1	-	BTB/POZ domain containing protein	4e-3	At1g05690	BT3 (BTB AND TAZ DOMAIN PROTEIN 3)	O.I.	C.G.	H.G.
29.5	99.7	3.0	Os02g0774100	9630.m05279	-	Thioredoxin-related domain containing protein	4e-3	At5g06690	WCRKC1 (WCRKC THIOREDOXIN 1)	O.I.	C.G.	H.G.
29.5	99.7	1.6	Os09g0485800	AK108749.1	-	Hypothetical protein	1e+0	At5g33390	glycine-rich protein	O.I.	C.G.	H.G.
29.3	99.7	4.1	Os01g0343500	AK071988.1	-	TPR repeat containing protein	9e-10	At3g05625	binding	O.I.	C.G.	H.G.
27.9	99.6	1.5	Os05g0590300	AK067788.1	-	Esterase/lipase/thioesterase domain containingprotein	6e-1	At3g02460	plant adhesion molecule, putative	O.I.	C.G.	H.G.
27.8	99.6	54.5	Os08g0425200	AK099569.1	-	Conserved hypothetical protein	1e-1	At4g11870	unknown protein	O.I.	C.G.	H.G.
26.5	99.5	4.0	Os02g0677600	AK068106.1	-	Conserved hypothetical protein	2e+0	At5g54740	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.
25.7	99.5	1.7	Os10g0498300	AK060338.1	-	Epoxide hydrolase	2e+0	At5g59870	HTA6	O.I.	C.G.	H.G.
24.7	99.4	47.9	Os12g0493900	AK121028.1	-	ARM repeat fold domain containing protein	4e-3	At1g30475	-	O.I.	C.G.	H.G.
24.2	99.4	7.2	Os01g0784700	AY327041.1	-	Receptor-like kinase	2e-6	At4g21380	ARK3 (A. THALIANA RECEPTOR KINASE 3)	O.I.	C.G.	H.G.
24.0	99.4	18.6	Os04g0103800	AK110629.1	-	Conserved hypothetical protein	2e+0	At5g65480	unknown protein	O.I.	C.G.	H.G.
23.7	99.4	14.5	Os03g0748300	AK068519.1	-	Galactose mutarotase-like domain containingprotein	5e-2	At3g15780	unknown protein	O.I.	C.G.	H.G.
22.6	99.3	3.3	Os08g0508500	AU222529	-	Peptidase aspartic family protein	3e+0	At4g10280	-	O.I.	C.G.	H.G.
22.5	99.3	14.7	Os02g0751600	AK072946.1	-	Peptidylprolyl isomerase, FKBP-type domaincontaining protein	4e-2	At5g03030	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.
21.9	99.3	3.0	Os05g0464300	AK062470.1	-	Conserved hypothetical protein	3e-1	At2g16510	vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)	O.I.	C.G.	H.G.
21.3	99.2	1.2	Os04g0481300	AK067096.1	-	Generic methyltransferase domain containingprotein	1e-1	At3g01660	methyltransferase	O.I.	C.G.	H.G.
21.3	99.2	1.0	Os04g0514500	AK073502.1	-	TPR-like domain containing protein	6e-4	At2g13600	pentatricopeptide (PPR) repeat-containing protein	O.I.	C.G.	H.G.
20.5	99.1	3.9	Os01g0272800	NM_188072.1	-	Conserved hypothetical protein	6e-1	At3g58710	WRKY69	O.I.	C.G.	H.G.
20.4	99.1	24.2	Os07g0170200	CB656315	-	HNH endonuclease domain containing protein	6e-13	At2g23840	HNH endonuclease domain-containing protein	O.I.	C.G.	H.G.
20.2	99.1	74.7	Os01g0730500	AK100064.1	-	Heat shock protein DnaJ family protein	2e-10	At2g42750	DNAJ heat shock N-terminal domain-containing protein	O.I.	C.G.	H.G.
20.1	99.1	26.0	Os01g0730800	AK070733.1	-	Mpv17/PMP22 family protein	3e+0	At4g05070	unknown protein	O.I.	C.G.	H.G.
19.9	99.1	4.6	Os03g0158300	AK066591.1	-	Conserved hypothetical protein	3e+0	At1g07950	surfeit locus protein 5 family protein / SURF5 family protein	O.I.	C.G.	H.G.
19.8	99.1	45.1	Os04g0119000	AK120328.1	-	Conserved hypothetical protein	2e+0	At3g17710	F-box family protein	O.I.	C.G.	H.G.
19.8	99.1	5.2	Os01g0323300	CA760263	-	Conserved hypothetical protein	3e-1	At1g54200	unknown protein	O.I.	C.G.	H.G.
19.8	99.1	5.1	Os01g0101200	AK067866.1	-	-	5e-4	At5g40405	-	O.I.	C.G.	H.G.
19.6	99.1	1.5	Os03g0271100	AB095095.1	-	Sigma factor SIG2B	4e-3	At1g08540	SIG2 (RNA POLYMERASE SIGMA SUBUNIT 2)	O.I.	C.G.	H.G.
19.3	99.0	4.8	Os11g0605100	AK065824.1	-	Disease resistance protein family protein	4e-1	At5g15850	COL1 (constans-like 1)	O.I.	C.G.	H.G.
19.3	99.0	1.0	Os11g0544000	AK066017.1	-	-	7e-2	At1g19990	unknown protein	O.I.	C.G.	H.G.
19.1	99.0	19.3	Os03g0679700	AK120238.1	-	Thiamine biosynthesis protein thiC	3e-125	At2g29630	THIC (ThiaminC)	O.I.	C.G.	H.G.
19.1	99.0	2.0	Os02g0129300	AK065700.1	-	Conserved hypothetical protein	1e-8	At5g48790	unknown protein	O.I.	C.G.	H.G.
19.0	99.0	3.2	Os04g0525000	AK067753.1	-	Conserved hypothetical protein	6e-1	At5g37474	-	O.I.	C.G.	H.G.

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GSM ID	GSM207565
Assay name	Mudanjiang8 wild type control rep1
GSE experiment	GSE8380: Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13

Microarray experiments to specifically-expressed genes

GSM ID GSM207565 Assay name Mudanjiang8 wild type control rep1 GSE experiment GSE8380: Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13

GSM ID GSM207565

Assay name Mudanjiang8 wild type control rep1

GSE experiment GSE8380: Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13