CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM204026

Assay name protoplast_control_rep1

GSE experiment GSE8248: Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
271.4 100.0 90.3 At3g16330 820880 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
205.4 100.0 54.1 At5g67310 836866 CYP81G1 member of CYP81G O.I. C.G. H.G.
165.7 100.0 98.5 At2g45570 819165 CYP76C2 member of CYP76C O.I. C.G. H.G.
165.3 100.0 143.4 At1g09500 837475 cinnamyl-alcohol dehydrogenase family / CAD family similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase O.I. C.G. H.G.
150.8 99.9 37.7 At1g74080 843748 MYB122 (MYB DOMAIN PROTEIN 122) Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB122). O.I. C.G. H.G.
133.1 99.9 129.8 At3g46660 823819 UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
132.8 99.9 103.4 At1g60730 842367 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPA O.I. C.G. H.G.
125.7 99.9 164.3 At2g37770 818354 aldo/keto reductase family protein F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA O.I. C.G. H.G.
118.1 99.9 396.2 At4g37990 829955 ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. O.I. C.G. H.G.
114.5 99.9 261.9 At5g39050 833897 transferase/ transferase, transferring acyl groups other than amino-acyl groups F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
113.3 99.9 147.7 At4g21120 827860 AAT1 (AMINO ACID TRANSPORTER 1) Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. O.I. C.G. H.G.
108.7 99.9 307.6 At3g48520 824011 CYP94B3 member of CYP94B O.I. C.G. H.G.
105.4 99.9 134.2 At3g50770 824241 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB O.I. C.G. H.G.
103.4 99.9 197.0 At4g15550 827229 IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE) UDP-glucose:indole-3-acetate beta-D-glucosyltransferase O.I. C.G. H.G.
103.2 99.9 58.9 At1g69480 843280 EXS family protein / ERD1/XPR1/SYG1 family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB O.I. C.G. H.G.
98.8 99.9 140.5 At5g05340 830416 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBM O.I. C.G. H.G.
97.8 99.9 47.5 At2g36770 818249 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMVBOF O.I. C.G. H.G.
95.7 99.9 178.9 At1g62300 842527 WRKY6 transcription factor WRKY6 (WRKY6) O.I. C.G. H.G.
95.0 99.9 226.0 At4g02940 828132 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB O.I. C.G. H.G.
91.8 99.9 30.3 At2g32660 817826 AtRLP22 (Receptor Like Protein 22) F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV O.I. C.G. H.G.
91.2 99.9 87.1 At3g04000 819555 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
88.8 99.9 166.6 At1g10585 837600 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
87.0 99.9 90.1 At1g21010 838695 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
86.4 99.9 316.2 At3g47960 823951 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFO O.I. C.G. H.G.
85.9 99.9 73.8 At1g65730 842884 YSL7 (YELLOW STRIPE LIKE 7) Arabidopsis thaliana metal-nicotianamine transporter YSL4 O.I. C.G. H.G.
82.9 99.9 117.6 At1g05560 837058 UGT75B1 (UDP-GLUCOSYLTRANSFERASE 75B1) A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques. O.I. C.G. H.G.
82.2 99.9 337.0 At4g22470 828342 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
79.6 99.9 142.9 At2g04160 814953 AIR3 isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell. O.I. C.G. H.G.
79.2 99.9 69.0 At4g37290 829883 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
77.3 99.9 70.7 At1g74360 843777 leucine-rich repeat transmembrane protein kinase, putative F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVA O.I. C.G. H.G.
72.8 99.9 85.9 At1g10580 837599 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV O.I. C.G. H.G.
70.9 99.9 198.2 At3g55970 824763 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM O.I. C.G. H.G.
70.2 99.9 208.4 At3g49620 824124 DIN11 (DARK INDUCIBLE 11) encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. O.I. C.G. H.G.
69.8 99.9 24.6 At3g11150 820285 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
67.2 99.8 17.2 At1g66570 842975 ATSUC7 (Sucrose-proton symporter 7) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity;P:transport, sucrose transport;C:integral to membrane, integral to plasma membrane, membrane;BMOPFA O.I. C.G. H.G.
65.0 99.8 131.2 At3g63380 825513 calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12) F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV O.I. C.G. H.G.
62.2 99.8 105.1 At5g39610 833957 ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6) Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510. O.I. C.G. H.G.
60.9 99.8 117.8 At1g32940 840188 SBT3.5 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM O.I. C.G. H.G.
60.7 99.8 24.1 At5g44390 834465 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMA O.I. C.G. H.G.
60.4 99.8 212.7 At1g22400 838846 UGT85A1 F:in 6 functions;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
59.7 99.8 73.4 At5g16980 831561 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA O.I. C.G. H.G.
58.3 99.8 80.3 At1g54570 841899 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF O.I. C.G. H.G.
56.5 99.8 106.7 At2g29490 817498 ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
56.0 99.8 99.2 At3g59220 825091 PRN (PIRIN) encodes a cupin-domain containing protein that is similar to pirins which interact with a CCAAT box binding transcription factor. The protein interacts with GPA1 (G protein alpha-subunit) in vitro. Mutants in the gene are affected in germination and early seedling development. O.I. C.G. H.G.
55.8 99.8 48.6 At5g64230 836544 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM O.I. C.G. H.G.
54.5 99.8 91.0 At5g24030 832468 SLAH3 (SLAC1 HOMOLOGUE 3) Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane. O.I. C.G. H.G.
54.1 99.8 109.1 At1g33110 840207 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
53.5 99.8 242.6 At1g52890 841722 ANAC019 (Arabidopsis NAC domain containing protein 19) encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. O.I. C.G. H.G.
52.8 99.8 290.3 At5g05730 830457 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. O.I. C.G. H.G.
52.7 99.8 22.3 At2g35730 818143 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:endomembrane system;P O.I. C.G. H.G.
51.9 99.8 28.6 At5g12930 831133 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABF O.I. C.G. H.G.
50.3 99.8 205.7 At2g43820 818986 UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2) Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. O.I. C.G. H.G.
50.1 99.8 37.3 At3g05360 819700 AtRLP30 (Receptor Like Protein 30) F:protein binding, kinase activity;P:defense response signaling pathway, resistance gene-independent, response to cyclopentenone, signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
49.8 99.8 58.2 At3g02875 821199 ILR1 (IAA-LEUCINE RESISTANT 1) Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors. O.I. C.G. H.G.
48.3 99.8 15.4 At4g18980 827634 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
48.1 99.8 125.5 At1g23800 838991 ALDH2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. O.I. C.G. H.G.
47.9 99.8 132.8 At5g17860 831654 CAX7 (calcium exchanger 7) F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA O.I. C.G. H.G.
47.5 99.8 195.8 At3g23570 821936 dienelactone hydrolase family protein F:hydrolase activity;P:response to salt stress;C:cellular_component unknown;BFPOMA O.I. C.G. H.G.
46.9 99.8 155.3 At1g17420 838314 LOX3 Lipoxygenase O.I. C.G. H.G.
46.6 99.8 94.9 At5g24160 832482 SQE6 (SQUALENE MONOXYGENASE 6) F:squalene monooxygenase activity, oxidoreductase activity, FAD binding;P:sterol biosynthetic process;C:endomembrane system, integral to membrane;OBFMPA O.I. C.G. H.G.
46.0 99.8 82.9 At2g29470 817496 ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
45.8 99.8 126.1 At3g28210 822447 PMZ Encodes a putative zinc finger protein (PMZ). O.I. C.G. H.G.
43.3 99.8 33.9 At2g47190 819332 MYB2 (MYB DOMAIN PROTEIN 2) Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin. O.I. C.G. H.G.
42.9 99.8 267.8 At2g36950 818269 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV O.I. C.G. H.G.
42.9 99.8 28.0 At5g58840 836001 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
42.5 99.8 130.9 At4g33540 829493 metallo-beta-lactamase family protein F:hydrolase activity, catalytic activity;P:response to arsenic, metabolic process;C:chloroplast;OBAPMF O.I. C.G. H.G.
42.3 99.8 256.1 At4g39950 830154 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
42.3 99.8 20.7 At1g22900 838897 - F:molecular_function unknown;P:defense response;C:endomembrane system;P O.I. C.G. H.G.
42.0 99.8 273.0 At5g16970 831560 AT-AER (alkenal reductase) encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls O.I. C.G. H.G.
41.9 99.8 27.0 At2g29480 817497 ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
41.5 99.8 85.4 At2g36630 818235 unknown protein F:unknown;P:N-terminal protein myristoylation;C:endomembrane system, integral to membrane;BOPA O.I. C.G. H.G.
41.4 99.8 31.9 At5g02590 831857 chloroplast lumen common family protein F:binding;P:unknown;C:chloroplast thylakoid lumen;BOMAPF O.I. C.G. H.G.
41.1 99.8 77.3 At4g25390 828642 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
41.0 99.8 107.9 At2g23150 816847 NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3) Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. O.I. C.G. H.G.
40.9 99.8 65.7 At4g22530 828348 embryo-abundant protein-related F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA O.I. C.G. H.G.
40.4 99.8 54.2 At1g28190 839713 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB O.I. C.G. H.G.
40.2 99.8 44.5 At5g34930 833436 arogenate dehydrogenase F:binding, prephenate dehydrogenase (NADP+) activity, catalytic activity;P:tyrosine biosynthetic process, metabolic process;C:unknown;BOPAFM O.I. C.G. H.G.
39.3 99.8 112.5 At5g58350 835947 WNK4 (WITH NO K (=LYSINE) 4) Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms. O.I. C.G. H.G.
39.3 99.8 60.0 At3g06810 819865 IBR3 (IBA-RESPONSE 3) Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation. O.I. C.G. H.G.
39.2 99.8 17.1 At1g66830 843001 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
39.1 99.8 247.9 At5g05600 830443 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM O.I. C.G. H.G.
38.8 99.8 79.2 At3g50900 824254 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
38.7 99.8 154.0 At1g69880 843324 ATH8 (thioredoxin H-type 8) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
38.5 99.8 145.3 At3g04070 819562 anac047 (Arabidopsis NAC domain containing protein 47) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
37.7 99.7 108.8 At1g30135 839893 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.6 99.7 64.4 At1g79410 844279 AtOCT5 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER5) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:integral to membrane, membrane;MBFPOA O.I. C.G. H.G.
37.1 99.7 319.9 At2g43510 818952 ATTI1 Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. O.I. C.G. H.G.
36.7 99.7 168.4 At1g72680 843600 cinnamyl-alcohol dehydrogenase, putative F:in 6 functions;P:lignin biosynthetic process;C:unknown;BOPFMAV O.I. C.G. H.G.
36.6 99.7 40.1 At3g55740 824740 PROT2 (PROLINE TRANSPORTER 2) Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots. O.I. C.G. H.G.
36.5 99.7 43.4 At4g21440 826916 ATMYB102 (ARABIDOPSIS MYB-LIKE 102) Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family. O.I. C.G. H.G.
36.4 99.7 90.7 At4g37310 829886 CYP81H1 member of CYP81H O.I. C.G. H.G.
36.0 99.7 128.9 At2g39660 818549 BIK1 (BOTRYTIS-INDUCED KINASE1) Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. O.I. C.G. H.G.
36.0 99.7 36.3 At1g19650 838552 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:plasma membrane;MPFO O.I. C.G. H.G.
35.9 99.7 40.8 At3g50760 824240 GATL2 (Galacturonosyltransferase-like 2) Encodes a protein with putative galacturonosyltransferase activity. O.I. C.G. H.G.
35.4 99.7 37.4 At3g21790 821733 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMBOVF O.I. C.G. H.G.
34.6 99.7 78.6 At1g66760 842994 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA O.I. C.G. H.G.
33.2 99.7 255.1 At2g04400 814980 indole-3-glycerol phosphate synthase (IGPS) F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP O.I. C.G. H.G.
33.2 99.7 170.6 At2g37760 818353 aldo/keto reductase family protein F:oxidoreductase activity;P:response to cadmium ion;C:unknown;BOMFPA O.I. C.G. H.G.
33.1 99.7 149.9 At1g43160 840915 RAP2.6 (related to AP2 6) encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily. O.I. C.G. H.G.
32.9 99.7 65.1 At1g76070 843939 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
271.4	100.0	90.3	At3g16330	820880	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
205.4	100.0	54.1	At5g67310	836866	CYP81G1	member of CYP81G	O.I.	C.G.	H.G.
165.7	100.0	98.5	At2g45570	819165	CYP76C2	member of CYP76C	O.I.	C.G.	H.G.
165.3	100.0	143.4	At1g09500	837475	cinnamyl-alcohol dehydrogenase family / CAD family	similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase	O.I.	C.G.	H.G.
150.8	99.9	37.7	At1g74080	843748	MYB122 (MYB DOMAIN PROTEIN 122)	Encodes a putative transcription factor, member of the R2R3 factor gene family (MYB122).	O.I.	C.G.	H.G.
133.1	99.9	129.8	At3g46660	823819	UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12)	F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
132.8	99.9	103.4	At1g60730	842367	aldo/keto reductase family protein	F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPA	O.I.	C.G.	H.G.
125.7	99.9	164.3	At2g37770	818354	aldo/keto reductase family protein	F:oxidoreductase activity;P:oxidation reduction;C:unknown;BOMFPA	O.I.	C.G.	H.G.
118.1	99.9	396.2	At4g37990	829955	ELI3-2 (ELICITOR-ACTIVATED GENE 3-2)	Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.	O.I.	C.G.	H.G.
114.5	99.9	261.9	At5g39050	833897	transferase/ transferase, transferring acyl groups other than amino-acyl groups	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
113.3	99.9	147.7	At4g21120	827860	AAT1 (AMINO ACID TRANSPORTER 1)	Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.	O.I.	C.G.	H.G.
108.7	99.9	307.6	At3g48520	824011	CYP94B3	member of CYP94B	O.I.	C.G.	H.G.
105.4	99.9	134.2	At3g50770	824241	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
103.4	99.9	197.0	At4g15550	827229	IAGLU (INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE)	UDP-glucose:indole-3-acetate beta-D-glucosyltransferase	O.I.	C.G.	H.G.
103.2	99.9	58.9	At1g69480	843280	EXS family protein / ERD1/XPR1/SYG1 family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane, plasma membrane;FMPOB	O.I.	C.G.	H.G.
98.8	99.9	140.5	At5g05340	830416	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:apoplast, cell wall;PFOBM	O.I.	C.G.	H.G.
97.8	99.9	47.5	At2g36770	818249	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMVBOF	O.I.	C.G.	H.G.
95.7	99.9	178.9	At1g62300	842527	WRKY6	transcription factor WRKY6 (WRKY6)	O.I.	C.G.	H.G.
95.0	99.9	226.0	At4g02940	828132	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity;P:biological_process unknown;C:unknown;POMFB	O.I.	C.G.	H.G.
91.8	99.9	30.3	At2g32660	817826	AtRLP22 (Receptor Like Protein 22)	F:protein binding, kinase activity;P:signal transduction, defense response;C:cellular_component unknown;PMOBFAV	O.I.	C.G.	H.G.
91.2	99.9	87.1	At3g04000	819555	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
88.8	99.9	166.6	At1g10585	837600	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
87.0	99.9	90.1	At1g21010	838695	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
86.4	99.9	316.2	At3g47960	823951	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:plasma membrane, membrane;PMBFO	O.I.	C.G.	H.G.
85.9	99.9	73.8	At1g65730	842884	YSL7 (YELLOW STRIPE LIKE 7)	Arabidopsis thaliana metal-nicotianamine transporter YSL4	O.I.	C.G.	H.G.
82.9	99.9	117.6	At1g05560	837058	UGT75B1 (UDP-GLUCOSYLTRANSFERASE 75B1)	A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques.	O.I.	C.G.	H.G.
82.2	99.9	337.0	At4g22470	828342	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
79.6	99.9	142.9	At2g04160	814953	AIR3	isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.	O.I.	C.G.	H.G.
79.2	99.9	69.0	At4g37290	829883	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
77.3	99.9	70.7	At1g74360	843777	leucine-rich repeat transmembrane protein kinase, putative	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:mitochondrion;MPOBFVA	O.I.	C.G.	H.G.
72.8	99.9	85.9	At1g10580	837599	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPAV	O.I.	C.G.	H.G.
70.9	99.9	198.2	At3g55970	824763	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:unknown;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
70.2	99.9	208.4	At3g49620	824124	DIN11 (DARK INDUCIBLE 11)	encodes a protein similar to 2-oxoacid-dependent dioxygenase. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.	O.I.	C.G.	H.G.
69.8	99.9	24.6	At3g11150	820285	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
67.2	99.8	17.2	At1g66570	842975	ATSUC7 (Sucrose-proton symporter 7)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity, sucrose:hydrogen symporter activity;P:transport, sucrose transport;C:integral to membrane, integral to plasma membrane, membrane;BMOPFA	O.I.	C.G.	H.G.
65.0	99.8	131.2	At3g63380	825513	calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12)	F:calmodulin binding, calcium-transporting ATPase activity;P:calcium ion transport, cation transport, metabolic process, ATP biosynthetic process;C:membrane;BMOFPAV	O.I.	C.G.	H.G.
62.2	99.8	105.1	At5g39610	833957	ATNAC6 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 6)	Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.	O.I.	C.G.	H.G.
60.9	99.8	117.8	At1g32940	840188	SBT3.5	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOAFM	O.I.	C.G.	H.G.
60.7	99.8	24.1	At5g44390	834465	FAD-binding domain-containing protein	F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;BFOPMA	O.I.	C.G.	H.G.
60.4	99.8	212.7	At1g22400	838846	UGT85A1	F:in 6 functions;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
59.7	99.8	73.4	At5g16980	831561	NADP-dependent oxidoreductase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA	O.I.	C.G.	H.G.
58.3	99.8	80.3	At1g54570	841899	esterase/lipase/thioesterase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF	O.I.	C.G.	H.G.
56.5	99.8	106.7	At2g29490	817498	ATGSTU1 (GLUTATHIONE S-TRANSFERASE TAU 1)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
56.0	99.8	99.2	At3g59220	825091	PRN (PIRIN)	encodes a cupin-domain containing protein that is similar to pirins which interact with a CCAAT box binding transcription factor. The protein interacts with GPA1 (G protein alpha-subunit) in vitro. Mutants in the gene are affected in germination and early seedling development.	O.I.	C.G.	H.G.
55.8	99.8	48.6	At5g64230	836544	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	O.I.	C.G.	H.G.
54.5	99.8	91.0	At5g24030	832468	SLAH3 (SLAC1 HOMOLOGUE 3)	Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.	O.I.	C.G.	H.G.
54.1	99.8	109.1	At1g33110	840207	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
53.5	99.8	242.6	At1g52890	841722	ANAC019 (Arabidopsis NAC domain containing protein 19)	encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.	O.I.	C.G.	H.G.
52.8	99.8	290.3	At5g05730	830457	ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)	ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.	O.I.	C.G.	H.G.
52.7	99.8	22.3	At2g35730	818143	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:endomembrane system;P	O.I.	C.G.	H.G.
51.9	99.8	28.6	At5g12930	831133	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOABF	O.I.	C.G.	H.G.
50.3	99.8	205.7	At2g43820	818986	UGT74F2 (UDP-GLUCOSYLTRANSFERASE 74F2)	Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques.	O.I.	C.G.	H.G.
50.1	99.8	37.3	At3g05360	819700	AtRLP30 (Receptor Like Protein 30)	F:protein binding, kinase activity;P:defense response signaling pathway, resistance gene-independent, response to cyclopentenone, signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
49.8	99.8	58.2	At3g02875	821199	ILR1 (IAA-LEUCINE RESISTANT 1)	Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.	O.I.	C.G.	H.G.
48.3	99.8	15.4	At4g18980	827634	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
48.1	99.8	125.5	At1g23800	838991	ALDH2B7	Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.	O.I.	C.G.	H.G.
47.9	99.8	132.8	At5g17860	831654	CAX7 (calcium exchanger 7)	F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA	O.I.	C.G.	H.G.
47.5	99.8	195.8	At3g23570	821936	dienelactone hydrolase family protein	F:hydrolase activity;P:response to salt stress;C:cellular_component unknown;BFPOMA	O.I.	C.G.	H.G.
46.9	99.8	155.3	At1g17420	838314	LOX3	Lipoxygenase	O.I.	C.G.	H.G.
46.6	99.8	94.9	At5g24160	832482	SQE6 (SQUALENE MONOXYGENASE 6)	F:squalene monooxygenase activity, oxidoreductase activity, FAD binding;P:sterol biosynthetic process;C:endomembrane system, integral to membrane;OBFMPA	O.I.	C.G.	H.G.
46.0	99.8	82.9	At2g29470	817496	ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
45.8	99.8	126.1	At3g28210	822447	PMZ	Encodes a putative zinc finger protein (PMZ).	O.I.	C.G.	H.G.
43.3	99.8	33.9	At2g47190	819332	MYB2 (MYB DOMAIN PROTEIN 2)	Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.	O.I.	C.G.	H.G.
42.9	99.8	267.8	At2g36950	818269	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POMBFV	O.I.	C.G.	H.G.
42.9	99.8	28.0	At5g58840	836001	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
42.5	99.8	130.9	At4g33540	829493	metallo-beta-lactamase family protein	F:hydrolase activity, catalytic activity;P:response to arsenic, metabolic process;C:chloroplast;OBAPMF	O.I.	C.G.	H.G.
42.3	99.8	256.1	At4g39950	830154	CYP79B2	Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
42.3	99.8	20.7	At1g22900	838897	-	F:molecular_function unknown;P:defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
42.0	99.8	273.0	At5g16970	831560	AT-AER (alkenal reductase)	encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls	O.I.	C.G.	H.G.
41.9	99.8	27.0	At2g29480	817497	ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
41.5	99.8	85.4	At2g36630	818235	unknown protein	F:unknown;P:N-terminal protein myristoylation;C:endomembrane system, integral to membrane;BOPA	O.I.	C.G.	H.G.
41.4	99.8	31.9	At5g02590	831857	chloroplast lumen common family protein	F:binding;P:unknown;C:chloroplast thylakoid lumen;BOMAPF	O.I.	C.G.	H.G.
41.1	99.8	77.3	At4g25390	828642	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
41.0	99.8	107.9	At2g23150	816847	NRAMP3 (NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3)	Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.	O.I.	C.G.	H.G.
40.9	99.8	65.7	At4g22530	828348	embryo-abundant protein-related	F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA	O.I.	C.G.	H.G.
40.4	99.8	54.2	At1g28190	839713	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB	O.I.	C.G.	H.G.
40.2	99.8	44.5	At5g34930	833436	arogenate dehydrogenase	F:binding, prephenate dehydrogenase (NADP+) activity, catalytic activity;P:tyrosine biosynthetic process, metabolic process;C:unknown;BOPAFM	O.I.	C.G.	H.G.
39.3	99.8	112.5	At5g58350	835947	WNK4 (WITH NO K (=LYSINE) 4)	Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.	O.I.	C.G.	H.G.
39.3	99.8	60.0	At3g06810	819865	IBR3 (IBA-RESPONSE 3)	Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid β-oxidation.	O.I.	C.G.	H.G.
39.2	99.8	17.1	At1g66830	843001	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
39.1	99.8	247.9	At5g05600	830443	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, iron ion binding;P:response to salt stress;C:unknown;POBFM	O.I.	C.G.	H.G.
38.8	99.8	79.2	At3g50900	824254	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
38.7	99.8	154.0	At1g69880	843324	ATH8 (thioredoxin H-type 8)	F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
38.5	99.8	145.3	At3g04070	819562	anac047 (Arabidopsis NAC domain containing protein 47)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.7	99.7	108.8	At1g30135	839893	JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.6	99.7	64.4	At1g79410	844279	AtOCT5 (Arabidopsis thaliana ORGANIC CATION/CARNITINE TRANSPORTER5)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport;C:integral to membrane, membrane;MBFPOA	O.I.	C.G.	H.G.
37.1	99.7	319.9	At2g43510	818952	ATTI1	Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.	O.I.	C.G.	H.G.
36.7	99.7	168.4	At1g72680	843600	cinnamyl-alcohol dehydrogenase, putative	F:in 6 functions;P:lignin biosynthetic process;C:unknown;BOPFMAV	O.I.	C.G.	H.G.
36.6	99.7	40.1	At3g55740	824740	PROT2 (PROLINE TRANSPORTER 2)	Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.	O.I.	C.G.	H.G.
36.5	99.7	43.4	At4g21440	826916	ATMYB102 (ARABIDOPSIS MYB-LIKE 102)	Encodes a MYB transcription factor involved in wounding and osmotic stress response. Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
36.4	99.7	90.7	At4g37310	829886	CYP81H1	member of CYP81H	O.I.	C.G.	H.G.
36.0	99.7	128.9	At2g39660	818549	BIK1 (BOTRYTIS-INDUCED KINASE1)	Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens.	O.I.	C.G.	H.G.
36.0	99.7	36.3	At1g19650	838552	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	F:phosphatidylinositol transporter activity, transporter activity;P:transport;C:plasma membrane;MPFO	O.I.	C.G.	H.G.
35.9	99.7	40.8	At3g50760	824240	GATL2 (Galacturonosyltransferase-like 2)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	H.G.
35.4	99.7	37.4	At3g21790	821733	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:cellular_component unknown;PMBOVF	O.I.	C.G.	H.G.
34.6	99.7	78.6	At1g66760	842994	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:response to wounding;C:membrane;BOPFMA	O.I.	C.G.	H.G.
33.2	99.7	255.1	At2g04400	814980	indole-3-glycerol phosphate synthase (IGPS)	F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP	O.I.	C.G.	H.G.
33.2	99.7	170.6	At2g37760	818353	aldo/keto reductase family protein	F:oxidoreductase activity;P:response to cadmium ion;C:unknown;BOMFPA	O.I.	C.G.	H.G.
33.1	99.7	149.9	At1g43160	840915	RAP2.6 (related to AP2 6)	encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.	O.I.	C.G.	H.G.
32.9	99.7	65.1	At1g76070	843939	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF	O.I.	C.G.	H.G.

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GSM ID	GSM204026
Assay name	protoplast_control_rep1
GSE experiment	GSE8248: Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells

Microarray experiments to specifically-expressed genes

GSM ID GSM204026 Assay name protoplast_control_rep1 GSE experiment GSE8248: Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells

GSM ID GSM204026

Assay name protoplast_control_rep1

GSE experiment GSE8248: Identification of hypoxia-inducible genes in Arabidopsis mesophyll cells