Microarray experiments to specifically-expressed genes

GSM ID	GSM201126
Assay name	Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1
GSE experiment	GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
1095.9	100.0	14.4	Gma.4442.1.S1_at	BQ080543	-	-	8e+0	At2g32190	unknown protein	O.I.	C.G.	H.G.	Please select
982.1	100.0	257.6	Gma.5296.1.S1_at	AI794757	-	-	1e-2	At3g48340	cysteine-type endopeptidase/ cysteine-type peptidase	O.I.	C.G.	H.G.	Please select
870.7	100.0	22.2	GmaAffx.12665.1.A1_at	BE822073	-	-	3e-3	At1g56670	GDSL-motif lipase/hydrolase family protein	O.I.	C.G.	H.G.	Please select
789.8	100.0	87.7	GmaAffx.39130.1.S1_at	AW308946	-	-	7e+0	At5g64810	WRKY51	O.I.	C.G.	H.G.	Please select
772.2	100.0	9.9	Gma.873.1.A1_at	BE822696	-	-	4e+0	At5g48870	SAD1 (SUPERSENSITIVE TO ABA AND DROUGHT 1)	O.I.	C.G.	H.G.	Please select
677.2	100.0	2.4	GmaAffx.43705.1.S1_at	AW279398	-	-	2e+0	At1g19400	unknown protein	O.I.	C.G.	H.G.	Please select
642.2	100.0	33.2	Gma.4964.2.A1_at	BI970008	-	-	3e+0	At4g13075	RALFL30 (RALF-LIKE 30)	O.I.	C.G.	H.G.	Please select
608.7	100.0	393.9	Gma.227.1.S1_at	AF160513.2	subtilisin-type protease precursor	-	8e-5	At1g20150	subtilase family protein	O.I.	C.G.	H.G.	Please select
565.2	100.0	0.1	Gma.5285.1.S1_at	BM091965	-	-	7e+0	Atcg00520	-	O.I.	C.G.	H.G.	Please select
554.8	100.0	0.3	GmaAffx.67057.1.S1_at	BE059919	-	-	8e-1	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	C.G.	H.G.	Please select
551.3	100.0	2.4	Gma.17843.1.S1_at	BE822690	-	-	7e-2	At2g18420	-	O.I.	C.G.	H.G.	Please select
548.6	100.0	118.1	GmaAffx.1956.1.S1_at	BU548398	-	-	7e-3	At3g66656	AGL91	O.I.	C.G.	H.G.	Please select
526.8	100.0	16.6	GmaAffx.8271.1.A1_at	BE820457	-	-	3e+0	At5g06750	protein phosphatase 2C family protein / PP2C family protein	O.I.	C.G.	H.G.	Please select
476.9	100.0	0.5	GmaAffx.780.1.S1_at	BQ081062	-	-	3e-4	At1g19840	auxin-responsive family protein	O.I.	C.G.	H.G.	Please select
470.9	100.0	48.2	Gma.13672.1.A1_at	CD403249	phosphoinositide-specific phospholipase C P25	-	3e+0	At4g00585	unknown protein	O.I.	C.G.	H.G.	Please select
454.4	100.0	118.7	Gma.4099.1.S1_at	BG651846	-	-	4e-13	At2g28470	BGAL8 (beta-galactosidase 8)	O.I.	C.G.	H.G.	Please select
395.1	100.0	58.1	GmaAffx.7416.1.A1_at	BI970966	-	-	7e-1	At5g53290	CRF3 (CYTOKININ RESPONSE FACTOR 3)	O.I.	C.G.	H.G.	Please select
385.2	100.0	36.1	Gma.982.1.S1_at	BF219577	-	-	2e+0	At2g22190	catalytic/ trehalose-phosphatase	O.I.	C.G.	H.G.	Please select
371.1	100.0	8.2	Gma.5277.1.S1_at	BM091884	-	-	5e-2	At3g59870	unknown protein	O.I.	C.G.	H.G.	Please select
370.1	100.0	0.3	GmaAffx.15117.1.S1_at	AW596890	-	-	6e-22	At2g02990	RNS1 (RIBONUCLEASE 1)	O.I.	C.G.	H.G.	Please select
354.1	100.0	16.1	Gma.17137.1.S1_at	BE022871	-	-	2e+0	At5g53210	SPCH (SPEECHLESS)	O.I.	C.G.	H.G.	Please select
352.9	100.0	17.0	GmaAffx.38046.1.S1_at	BU760708	-	-	4e+0	At1g67785	unknown protein	O.I.	C.G.	H.G.	Please select
329.6	100.0	76.6	Gma.3952.1.S1_at	BQ452478	-	-	6e-1	At5g37660	PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)	O.I.	C.G.	H.G.	Please select
306.8	100.0	0.9	GmaAffx.33772.1.S1_at	CA803018	-	-	3e+0	At5g43570	serine-type endopeptidase inhibitor	O.I.	C.G.	H.G.	Please select
285.0	100.0	2.6	GmaAffx.45904.1.A1_at	BU550761	-	-	4e-1	At5g48610	unknown protein	O.I.	C.G.	H.G.	Please select
268.2	100.0	5.6	GmaAffx.24390.1.A1_at	BU547189	-	-	2e-1	At1g29480	unknown protein	O.I.	C.G.	H.G.	Please select
263.5	100.0	14.1	GmaAffx.3573.1.S1_at	BE821585	-	-	2e-1	At1g14860	atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18)	O.I.	C.G.	H.G.	Please select
255.4	100.0	3.2	Gma.13434.1.A1_at	CD398280	-	-	7e-1	At1g45248	-	O.I.	C.G.	H.G.	Please select
252.4	100.0	197.5	Gma.838.1.S1_at	BE821823	-	-	5e-1	At5g49360	BXL1 (BETA-XYLOSIDASE 1)	O.I.	C.G.	H.G.	Please select
241.0	100.0	0.0	Gma.5269.1.S1_at	AF202183.1	isoflavone reductase homolog 1	-	7e-7	At4g39230	isoflavone reductase, putative	O.I.	C.G.	H.G.	Please select
240.6	100.0	137.9	Gma.4867.1.S1_at	BE822060	-	-	7e-3	At1g28110	SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)	O.I.	C.G.	H.G.	Please select
236.6	100.0	109.9	Gma.16076.1.A1_at	BE820571	-	-	2e-1	At1g07476	unknown protein	O.I.	C.G.	H.G.	Please select
233.5	100.0	10.0	GmaAffx.20786.1.A1_at	BE820987	-	-	7e-1	At3g02110	scpl25 (serine carboxypeptidase-like 25)	O.I.	C.G.	H.G.	Please select
227.7	100.0	188.7	GmaAffx.25470.1.S1_at	AW164631	-	-	2e-1	At5g53310	myosin heavy chain-related	O.I.	C.G.	H.G.	Please select
206.0	100.0	8.5	GmaAffx.68866.1.S1_at	CD408467	-	-	1e+0	At3g58270	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	C.G.	H.G.	Please select
203.7	100.0	213.3	GmaAffx.17518.1.S1_at	AW598055	-	-	5e+0	At4g04930	DES-1-LIKE	O.I.	C.G.	H.G.	Please select
201.4	100.0	2.3	Gma.391.1.A1_at	AW349964	-	-	1e+1	At5g58260	-	O.I.	C.G.	H.G.	Please select
200.9	100.0	4.0	Gma.5775.1.S1_at	BM523477	-	-	3e+0	At5g18040	unknown protein	O.I.	C.G.	H.G.	Please select
197.6	100.0	10.5	GmaAffx.14648.1.A1_at	BM886782	-	-	7e-11	At4g05390	ATRFNR1 (ROOT FNR 1)	O.I.	C.G.	H.G.	Please select
195.2	100.0	13.1	GmaAffx.1061.1.S1_at	BU544040	-	-	2e-5	At5g49120	senescence-associated protein-related	O.I.	C.G.	H.G.	Please select
175.4	100.0	2.3	Gma.20.1.S1_at	X04782.1	nodulin	-	6e-4	At5g37810	NIP4	O.I.	C.G.	H.G.	Please select
175.1	100.0	10.5	Gma.17236.1.A1_at	AW309595	-	-	9e-1	At4g01480	AtPPa5 (Arabidopsis thaliana pyrophosphorylase 5)	O.I.	C.G.	H.G.	Please select
174.2	100.0	1.4	GmaAffx.7093.2.S1_at	BU083586	-	-	1e+1	At5g59840	Ras-related GTP-binding family protein	O.I.	C.G.	H.G.	Please select
174.0	100.0	4.7	Gma.1871.2.S1_a_at	BF219517	-	-	6e+0	At4g19420	pectinacetylesterase family protein	O.I.	C.G.	H.G.	Please select
166.5	100.0	39.6	Gma.7330.1.S1_at	BQ628103	-	-	9e-33	At3g52990	pyruvate kinase, putative	O.I.	C.G.	H.G.	Please select
166.2	100.0	1.8	GmaAffx.2999.1.A1_at	AW705849	-	-	8e-1	At5g25460	unknown protein	O.I.	C.G.	H.G.	Please select
162.8	100.0	18.1	Gma.17448.1.S1_at	AW596896	-	-	2e+0	At4g16930	disease resistance protein (TIR-NBS-LRR class), putative	O.I.	C.G.	H.G.	Please select
162.1	100.0	0.6	GmaAffx.43620.1.S1_at	AW184956	-	-	9e-1	At1g69080	universal stress protein (USP) family protein	O.I.	C.G.	H.G.	Please select
162.0	100.0	94.1	GmaAffx.58553.2.A1_at	BE822612	-	-	2e-1	At1g43320	unknown protein	O.I.	C.G.	H.G.	Please select
159.5	100.0	27.5	GmaAffx.13543.1.A1_at	BG650523	-	-	6e-3	At5g20950	glycosyl hydrolase family 3 protein	O.I.	C.G.	H.G.	Please select
156.2	100.0	55.7	Gma.4.1.S1_at	X81460.1	glutamine synthetase	-	4e-42	At5g37600	ATGSR1	O.I.	C.G.	H.G.	Please select
155.8	100.0	2.8	GmaAffx.52963.1.S1_at	AW310673	-	-	1e+0	At5g03840	TFL1 (TERMINAL FLOWER 1)	O.I.	C.G.	H.G.	Please select
155.2	100.0	0.0	GmaAffx.17686.1.S1_at	BF426170	-	-	2e+0	At5g44730	haloacid dehalogenase-like hydrolase family protein	O.I.	C.G.	H.G.	Please select
152.3	100.0	16.4	GmaAffx.18367.1.S1_at	CA819184	-	-	5e-3	At2g44620	MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1)	O.I.	C.G.	H.G.	Please select
146.2	100.0	0.1	Gma.16078.1.S1_at	BE820949	-	-	1e+0	At4g26055	unknown protein	O.I.	C.G.	H.G.	Please select
145.2	100.0	1.2	GmaAffx.84746.1.A1_at	AW349405	-	-	1e+1	At5g50050	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select
145.1	100.0	1.5	Gma.13563.1.A1_at	CD406570	-	-	4e-1	At4g16360	AMP-activated protein kinase	O.I.	C.G.	H.G.	Please select
144.4	100.0	3.9	GmaAffx.71084.1.S1_at	AW311116	-	-	3e+0	At2g22145	-	O.I.	C.G.	H.G.	Please select
143.9	100.0	0.4	Gma.357.1.A1_at	AW348892	-	-	6e-1	At3g16565	ATP binding / alanine-tRNA ligase/ nucleic acid binding / nucleotide binding	O.I.	C.G.	H.G.	Please select
143.7	100.0	2.2	Gma.13500.1.A1_at	CD399280	-	-	3e+0	At5g18940	Mo25 family protein	O.I.	C.G.	H.G.	Please select
138.2	100.0	0.3	GmaAffx.7043.1.S1_at	AW185701	-	-	2e-1	At5g64630	FAS2 (FASCIATA 2)	O.I.	C.G.	H.G.	Please select
137.4	100.0	27.2	GmaAffx.22374.1.S1_at	BF595270	-	-	8e-1	At5g47900	unknown protein	O.I.	C.G.	H.G.	Please select
136.5	100.0	7.3	GmaAffx.778.1.A1_at	BE822299	-	-	7e-1	At5g33370	GDSL-motif lipase/hydrolase family protein	O.I.	C.G.	H.G.	Please select
136.1	100.0	72.6	GmaAffx.72179.1.A1_at	BE822416	-	-	3e+0	At3g08690	UBC11 (UBIQUITIN-CONJUGATING ENZYME 11)	O.I.	C.G.	H.G.	Please select
135.7	100.0	67.0	Gma.11269.1.S1_at	CD395046	-	-	2e+0	At3g62420	ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53)	O.I.	C.G.	H.G.	Please select
132.6	100.0	79.3	Gma.17835.1.S1_at	BE822840	-	-	1e+0	At1g75250	ATRL6 (ARABIDOPSIS RAD-LIKE 6)	O.I.	C.G.	H.G.	Please select
132.6	100.0	32.1	GmaAffx.8063.1.S1_s_at	BE820317	-	-	1e-3	At2g39705	RTFL8 (ROTUNDIFOLIA LIKE 8)	O.I.	C.G.	H.G.	Please select
131.4	100.0	1.0	GmaAffx.26685.1.A1_s_at	BE820819	-	-	6e+0	At4g11040	protein phosphatase 2C, putative / PP2C, putative	O.I.	C.G.	H.G.	Please select
131.0	100.0	150.8	Gma.1904.1.S1_at	AW277823	-	-	1e-1	At3g16690	nodulin MtN3 family protein	O.I.	C.G.	H.G.	Please select
128.6	100.0	14.4	Gma.13474.1.A1_at	CD398666	-	-	8e-1	At1g78520	-	O.I.	C.G.	H.G.	Please select
125.5	100.0	9.5	GmaAffx.19735.1.A1_at	BU544010	-	-	4e+0	At3g53370	DNA-binding S1FA family protein	O.I.	C.G.	H.G.	Please select
124.2	100.0	12.3	Gma.1104.1.S1_at	AW101582	cytosolic glutamine synthetase gamma2	-	3e-89	At5g37600	ATGSR1	O.I.	C.G.	H.G.	Please select
123.0	100.0	80.9	Gma.18082.1.S1_at	BI321473	-	-	1e-2	At4g09610	GASA2 (GAST1 PROTEIN HOMOLOG 2)	O.I.	C.G.	H.G.	Please select
122.9	100.0	35.1	Gma.1871.2.S1_at	BF219517	-	-	6e+0	At4g19420	pectinacetylesterase family protein	O.I.	C.G.	H.G.	Please select
120.2	100.0	2.2	GmaAffx.63834.1.S1_at	BQ612344	-	-	2e-6	At5g22980	scpl47 (serine carboxypeptidase-like 47)	O.I.	C.G.	H.G.	Please select
120.0	100.0	6.0	Gma.4169.1.S1_at	BQ473559	-	-	1e-9	At4g39700	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	C.G.	H.G.	Please select
118.6	100.0	0.5	GmaAffx.31065.1.S1_at	AW277626	-	-	2e+0	At3g25080	unknown protein	O.I.	C.G.	H.G.	Please select
117.5	100.0	38.2	GmaAffx.44061.1.S1_at	BU544068	-	-	5e-1	At5g12235	CLE22 (CLAVATA3/ESR-RELATED 22)	O.I.	C.G.	H.G.	Please select
114.4	100.0	29.1	Gma.13615.1.S1_at	BM732166	-	-	6e-1	At5g48575	unknown protein	O.I.	C.G.	H.G.	Please select
112.9	100.0	0.4	Gma.6771.1.S1_at	BE822129	-	-	4e-1	At5g24860	FPF1 (FLOWERING PROMOTING FACTOR 1)	O.I.	C.G.	H.G.	Please select
111.9	100.0	93.0	Gma.244.1.S1_at	BE822846	alcohol dehydrogenase 1	-	1e-11	At1g77120	ADH1 (ALCOHOL DEHYDROGENASE 1)	O.I.	C.G.	H.G.	Please select
110.9	100.0	11.6	GmaAffx.15180.1.A1_at	BU548170	-	-	1e+0	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	O.I.	C.G.	H.G.	Please select
109.9	100.0	9.7	Gma.5405.1.S1_at	BM091989	-	-	3e-4	At3g54990	SMZ (SCHLAFMUTZE)	O.I.	C.G.	H.G.	Please select
109.2	100.0	40.4	Gma.876.1.S1_at	L78163.1	peroxidase	-	4e-5	At2g38390	peroxidase, putative	O.I.	C.G.	H.G.	Please select
105.4	100.0	11.0	Gma.9483.1.A1_at	CA819741	-	-	5e+0	At4g14830	unknown protein	O.I.	C.G.	H.G.	Please select
105.0	100.0	21.3	GmaAffx.63449.1.S1_at	AW351062	MYB transcription factor MYB138	-	2e-15	At1g70000	DNA-binding family protein	O.I.	C.G.	H.G.	Please select
103.5	100.0	33.9	Gma.7045.1.S1_at	AF532621.1	bZIP transcription factor ATB2	-	4e-5	At4g34588	CPuORF2 (Conserved peptide upstream open reading frame 2)	O.I.	C.G.	H.G.	Please select
102.8	100.0	0.1	GmaAffx.68320.1.S1_at	BM527339	-	-	9e-1	At4g32710	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	O.I.	C.G.	H.G.	Please select
101.0	100.0	62.3	GmaAffx.16959.1.S1_s_at	CD486940	-	-	3e-13	At5g53880	unknown protein	O.I.	C.G.	H.G.	Please select
100.4	100.0	1.5	GmaAffx.88397.1.S1_at	CA819333	-	-	9e-1	At5g41520	40S ribosomal protein S10 (RPS10B)	O.I.	C.G.	H.G.	Please select
99.4	100.0	4.3	GmaAffx.6867.1.A1_at	BI970542	-	-	2e-4	At5g36110	CYP716A1	O.I.	C.G.	H.G.	Please select
97.3	100.0	27.7	Gma.15870.1.A1_at	CD417955	bZIP transcription factor bZIP17	-	1e+1	At5g02800	protein kinase family protein	O.I.	C.G.	H.G.	Please select
97.3	100.0	8.2	Gma.17992.1.S1_at	BG157311	-	-	4e+0	At5g37580	-	O.I.	C.G.	H.G.	Please select
96.4	100.0	3.1	Gma.17305.1.S1_at	AW351319	-	-	1e-1	At5g58412	-	O.I.	C.G.	H.G.	Please select
96.3	100.0	2.9	Gma.12732.1.A1_at	CD395892	-	-	3e+0	At5g26270	unknown protein	O.I.	C.G.	H.G.	Please select
96.0	100.0	0.2	Gma.12902.1.A1_at	CD395017	-	-	3e+0	At5g23600	tRNA 2'phosphotransferase, putative	O.I.	C.G.	H.G.	Please select
93.4	100.0	15.7	GmaAffx.34404.1.S1_at	AW119750	-	-	6e-1	At4g26701	DNA binding / DNA topoisomerase type I	O.I.	C.G.	H.G.	Please select
93.1	100.0	0.0	GmaAffx.6020.1.A1_at	BU550486	-	-	6e-3	At3g54740	unknown protein	O.I.	C.G.	H.G.	Please select
92.9	100.0	1.0	GmaAffx.29770.1.S1_at	BM144004	-	-	3e+0	At1g50170	ATSIRB (ARABIDOPSIS THALIANA SIROHYDROCHLORIN FERROCHELATASE B)	O.I.	C.G.	H.G.	Please select
92.4	100.0	2.6	GmaAffx.6424.1.S1_at	CA935384	-	-	2e+0	At5g66700	HB53	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage