Microarray experiments to specifically-expressed genes

GSM ID	GSM201125
Assay name	Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2
GSE experiment	GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
1505.1	100.0	15.7	GmaAffx.77748.1.S1_at	BE059124	-	-	2e-1	At1g77765	unknown protein	O.I.	C.G.	H.G.	Please select
1431.3	100.0	0.0	Gma.10661.1.S1_a_at	BE659273	-	-	5e+0	At5g65220	ribosomal protein L29 family protein	O.I.	C.G.	H.G.	Please select
1352.9	100.0	43.9	Gma.10661.2.S1_at	AW119498	-	-	1e+0	At3g46320	histone H4	O.I.	C.G.	H.G.	Please select
1348.2	100.0	4.0	GmaAffx.32258.1.S1_at	BE820234	-	-	6e-2	At1g75030	ATLP-3	O.I.	C.G.	H.G.	Please select
1248.2	100.0	1.1	GmaAffx.48250.1.S1_at	AW396199	MYB transcription factor MYB185	-	4e+0	At5g15230	GASA4 (GAST1 PROTEIN HOMOLOG 4)	O.I.	C.G.	H.G.	Please select
1180.2	100.0	0.2	GmaAffx.29658.1.A1_at	CD414165	-	-	3e+0	At2g36325	hydrolase, acting on ester bonds	O.I.	C.G.	H.G.	Please select
1143.4	100.0	7.0	GmaAffx.34868.1.A1_at	BU545422	-	-	3e+0	At4g39990	RABA4B (RAB GTPASE HOMOLOG A4B)	O.I.	C.G.	H.G.	Please select
1115.5	100.0	54.0	Gma.5359.1.S1_at	BM092603	-	-	1e+1	At5g45350	proline-rich family protein	O.I.	C.G.	H.G.	Please select
1111.9	100.0	28.9	GmaAffx.67373.1.S1_at	BE659712	-	-	3e-1	At2g15680	calmodulin-related protein, putative	O.I.	C.G.	H.G.	Please select
1029.3	100.0	5.1	GmaAffx.33377.1.A1_at	BU544405	-	-	2e-1	At1g22140	unknown protein	O.I.	C.G.	H.G.	Please select
1026.4	100.0	34.6	Gma.10032.1.S1_at	CD418000	-	-	1e-10	At2g29450	ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)	O.I.	C.G.	H.G.	Please select
996.7	100.0	1.6	GmaAffx.80720.1.S1_at	BE058910	dihydroflavonol-4-reductase	-	8e-1	At4g34265	unknown protein	O.I.	C.G.	H.G.	Please select
969.5	100.0	34.8	Gma.103.1.S1_at	AF024652.1	polyphosphoinositide binding protein Ssh2p	-	4e-5	At1g01630	SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative	O.I.	C.G.	H.G.	Please select
892.2	100.0	11.4	GmaAffx.56720.1.A1_at	CD391617	-	-	1e-2	At2g19480	NAP1	O.I.	C.G.	H.G.	Please select
869.3	100.0	0.5	GmaAffx.49459.1.A1_at	BE821470	-	-	3e+0	At3g02960	copper-binding protein-related	O.I.	C.G.	H.G.	Please select
825.6	100.0	16.0	GmaAffx.7047.1.S1_at	BE821991	-	-	9e-1	At5g39210	CRR7 (CHLORORESPIRATORY REDUCTION 7)	O.I.	C.G.	H.G.	Please select
818.1	100.0	4.3	GmaAffx.74410.1.A1_at	BU545158	-	-	3e-1	At5g35475	-	O.I.	C.G.	H.G.	Please select
809.5	100.0	44.4	GmaAffx.66407.1.A1_at	BE822296	-	-	7e-1	At5g67390	unknown protein	O.I.	C.G.	H.G.	Please select
782.3	100.0	0.2	GmaAffx.6271.1.S1_at	CA799002	-	-	2e-1	At5g38810	F-box family protein	O.I.	C.G.	H.G.	Please select
768.8	100.0	113.4	Gma.5267.1.S1_at	BE610297	-	-	4e-4	At5g56170	-	O.I.	C.G.	H.G.	Please select
750.9	100.0	87.4	GmaAffx.67044.1.S1_at	BE059104	-	-	2e+0	At4g28780	GDSL-motif lipase/hydrolase family protein	O.I.	C.G.	H.G.	Please select
742.8	100.0	30.2	GmaAffx.86037.1.S1_at	BF597463	-	-	8e-1	At5g11900	eukaryotic translation initiation factor SUI1 family protein	O.I.	C.G.	H.G.	Please select
740.8	100.0	0.6	Gma.8533.1.S1_at	BE608504	MYB transcription factor MYB115	-	7e-5	At2g16720	MYB7 (MYB DOMAIN PROTEIN 7)	O.I.	C.G.	H.G.	Please select
729.5	100.0	22.0	GmaAffx.52704.2.S1_at	AW153168	WRKY29 protein	-	6e-1	At2g26930	ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE)	O.I.	C.G.	H.G.	Please select
721.4	100.0	0.7	Gma.9089.1.A1_at	BU544319	-	-	9e-8	At4g19640	ARA7	O.I.	C.G.	H.G.	Please select
692.5	100.0	22.6	GmaAffx.58549.1.S1_at	BE822360	-	-	1e-2	At1g54320	LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein	O.I.	C.G.	H.G.	Please select
683.1	100.0	75.8	Gma.16969.1.S1_s_at	BI968170	-	-	7e-8	At5g51950	glucose-methanol-choline (GMC) oxidoreductase family protein	O.I.	C.G.	H.G.	Please select
674.3	100.0	16.7	GmaAffx.49465.1.A1_at	BE821938	-	-	3e+0	At4g33750	-	O.I.	C.G.	H.G.	Please select
669.3	100.0	0.2	Gma.7324.1.A1_at	AW755302	-	-	8e-1	At2g22340	unknown protein	O.I.	C.G.	H.G.	Please select
645.0	100.0	1.1	GmaAffx.75479.1.S1_at	AW704774	-	-	4e+0	At5g02020	unknown protein	O.I.	C.G.	H.G.	Please select
622.9	100.0	1.9	GmaAffx.6001.1.S1_at	BG511848	-	-	5e-2	At5g06210	RNA-binding protein, putative	O.I.	C.G.	H.G.	Please select
603.5	100.0	37.4	Gma.12585.1.A1_at	CD416173	-	-	4e+0	At5g51120	PABN1 (POLYADENYLATE-BINDING PROTEIN 1)	O.I.	C.G.	H.G.	Please select
601.1	100.0	26.1	Gma.16191.1.S1_at	CD412156	-	-	1e-10	At5g51950	glucose-methanol-choline (GMC) oxidoreductase family protein	O.I.	C.G.	H.G.	Please select
600.3	100.0	12.8	Gma.15650.1.A1_at	CD412516	-	-	3e+0	At5g22870	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	O.I.	C.G.	H.G.	Please select
568.9	100.0	77.1	GmaAffx.55240.1.S1_at	BM092410	-	-	6e-1	At4g24540	AGL24 (AGAMOUS-LIKE 24)	O.I.	C.G.	H.G.	Please select
553.8	100.0	145.3	Gma.5313.1.S1_at	AF167556.1	dihydroflavonol-4-reductase DFR1	-	1e-14	At5g42800	DFR (DIHYDROFLAVONOL 4-REDUCTASE)	O.I.	C.G.	H.G.	Please select
539.4	100.0	44.1	GmaAffx.30709.1.S1_at	BE059739	-	-	2e-1	At1g35435	-	O.I.	C.G.	H.G.	Please select
533.6	100.0	12.7	GmaAffx.34617.1.S1_s_at	AW317127	-	-	8e+0	At4g30470	cinnamoyl-CoA reductase-related	O.I.	C.G.	H.G.	Please select
510.9	100.0	0.0	GmaAffx.39483.1.A1_at	BU544658	MYB transcription factor MYB159	-	2e-4	At4g38620	MYB4	O.I.	C.G.	H.G.	Please select
509.4	100.0	1.5	GmaAffx.40574.1.S1_at	BU926059	-	-	3e-1	At4g14746	-	O.I.	C.G.	H.G.	Please select
504.6	100.0	171.3	GmaAffx.43987.1.S1_at	AW596871	-	-	5e-12	At1g61720	BAN (BANYULS)	O.I.	C.G.	H.G.	Please select
504.0	100.0	6.5	Gma.5290.1.S1_at	BM092011	-	-	2e+0	At3g15450	unknown protein	O.I.	C.G.	H.G.	Please select
501.2	100.0	0.9	Gma.17391.1.S1_at	BG238044	-	-	4e+0	At1g53850	PAE1	O.I.	C.G.	H.G.	Please select
498.4	100.0	0.7	Gma.6201.1.S1_at	BQ612035	-	-	7e-1	At5g06060	tropinone reductase, putative / tropine dehydrogenase, putative	O.I.	C.G.	H.G.	Please select
497.1	100.0	20.0	GmaAffx.52594.1.S1_at	BE058579	-	-	3e-4	At1g17260	AHA10 (Autoinhibited H(+)-ATPase isoform 10)	O.I.	C.G.	H.G.	Please select
493.6	100.0	0.7	GmaAffx.52704.1.A1_at	BE659242	WRKY29 protein	-	3e+0	At5g53720	RNA recognition motif (RRM)-containing protein	O.I.	C.G.	H.G.	Please select
491.4	100.0	33.0	GmaAffx.65531.1.S1_at	CA782932	-	-	3e-2	At4g35160	O-methyltransferase family 2 protein	O.I.	C.G.	H.G.	Please select
471.3	100.0	139.3	Gma.5461.1.S1_at	BI941830	flavanone 3-hydroxylase	-	2e-38	At3g51240	F3H (FLAVANONE 3-HYDROXYLASE)	O.I.	C.G.	H.G.	Please select
462.8	100.0	1.0	GmaAffx.47706.1.A1_at	CD396118	-	-	2e-1	At1g63410	unknown protein	O.I.	C.G.	H.G.	Please select
436.4	100.0	0.8	GmaAffx.52704.3.S1_at	AW423584	WRKY29 protein	-	1e-2	At2g37260	TTG2 (TRANSPARENT TESTA GLABRA 2)	O.I.	C.G.	H.G.	Please select
433.8	100.0	8.5	GmaAffx.1877.1.A1_at	CD411016	-	-	1e-1	At4g37240	unknown protein	O.I.	C.G.	H.G.	Please select
429.6	100.0	6.4	Gma.12823.1.A1_at	CD391552	-	-	7e-1	At5g42500	disease resistance-responsive family protein	O.I.	C.G.	H.G.	Please select
429.5	100.0	48.4	Gma.17066.1.S1_at	AW185607	-	-	3e+0	At5g25360	unknown protein	O.I.	C.G.	H.G.	Please select
427.1	100.0	19.3	Gma.6796.1.S1_at	BU545053	-	-	1e-8	At4g36880	CP1 (CYSTEINE PROTEINASE1)	O.I.	C.G.	H.G.	Please select
421.5	100.0	1.4	Gma.5902.1.S1_at	BQ610302	-	-	8e-1	At3g17190	unknown protein	O.I.	C.G.	H.G.	Please select
404.3	100.0	114.7	Gma.13259.2.S1_a_at	AW277702	MYB transcription factor MYB172	-	9e-4	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	O.I.	C.G.	H.G.	Please select
403.0	100.0	1.2	GmaAffx.13635.1.S1_at	BE658184	-	-	3e-1	At3g49190	condensation domain-containing protein	O.I.	C.G.	H.G.	Please select
397.3	100.0	34.8	GmaAffx.60751.1.S1_at	BE610338	-	-	1e+1	At5g18160	F-box family protein	O.I.	C.G.	H.G.	Please select
388.3	100.0	14.8	GmaAffx.15861.1.S1_at	CD418539	-	-	6e+0	At4g02733	-	O.I.	C.G.	H.G.	Please select
387.0	100.0	49.5	Gma.17061.1.S1_at	BE822282	-	-	9e-1	At5g58000	-	O.I.	C.G.	H.G.	Please select
385.4	100.0	2.3	GmaAffx.81219.1.A1_s_at	BE822482	-	-	9e+0	At3g49845	-	O.I.	C.G.	H.G.	Please select
382.6	100.0	7.2	GmaAffx.52963.1.S1_at	AW310673	-	-	1e+0	At5g03840	TFL1 (TERMINAL FLOWER 1)	O.I.	C.G.	H.G.	Please select
378.2	100.0	7.0	GmaAffx.70954.1.S1_at	AW185165	-	-	3e-17	At5g45130	RHA1 (RAB HOMOLOG 1)	O.I.	C.G.	H.G.	Please select
376.6	100.0	7.6	GmaAffx.33361.1.S1_at	BU090994	-	-	9e-1	At3g48580	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	O.I.	C.G.	H.G.	Please select
375.7	100.0	0.0	Gma.5269.2.S1_at	AW185902	-	-	2e-3	At1g75300	isoflavone reductase, putative	O.I.	C.G.	H.G.	Please select
372.4	100.0	2.5	Gma.14154.1.A1_at	CD416538	-	-	1e+1	At5g18037	DNA binding	O.I.	C.G.	H.G.	Please select
367.8	100.0	0.4	Gma.12804.1.A1_at	CD390814	-	-	4e-2	At5g21090	leucine-rich repeat protein, putative	O.I.	C.G.	H.G.	Please select
363.0	100.0	1.2	Gma.6597.1.S1_at	BQ628516	-	-	6e+0	At2g31335	unknown protein	O.I.	C.G.	H.G.	Please select
358.4	100.0	1.9	GmaAffx.49458.1.S1_at	AW395346	-	-	1e+0	At3g07190	-	O.I.	C.G.	H.G.	Please select
354.0	100.0	3.4	GmaAffx.52514.1.S1_at	AI856779	-	-	9e-1	At5g55410	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
348.3	100.0	6.2	GmaAffx.36979.1.S1_at	BM092516	-	-	4e-1	At1g80840	WRKY40	O.I.	C.G.	H.G.	Please select
336.7	100.0	0.4	GmaAffx.29628.1.A1_at	CD408300	-	-	2e+0	At5g11950	protein homodimerization	O.I.	C.G.	H.G.	Please select
334.0	100.0	167.6	Gma.1163.1.S1_at	AW423421	Anthocyanidin synthase	-	3e-21	At4g22880	LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)	O.I.	C.G.	H.G.	Please select
331.0	100.0	46.3	GmaAffx.74402.1.A1_at	BU544670	-	-	7e+0	At3g02190	60S ribosomal protein L39 (RPL39B)	O.I.	C.G.	H.G.	Please select
321.0	100.0	1.6	GmaAffx.46103.1.S1_at	BM091933	-	-	7e-1	At4g18080	unknown protein	O.I.	C.G.	H.G.	Please select
318.4	100.0	20.3	GmaAffx.11228.1.A1_at	CD417288	-	-	7e-1	At2g45140	PVA12 (PLANT VAP HOMOLOG 12)	O.I.	C.G.	H.G.	Please select
312.4	100.0	10.6	GmaAffx.58555.1.S1_at	BQ298550	-	-	8e-1	At5g58800	quinone reductase family protein	O.I.	C.G.	H.G.	Please select
310.4	100.0	12.3	Gma.6488.1.S1_at	BQ612355	-	-	2e-1	At4g11870	unknown protein	O.I.	C.G.	H.G.	Please select
305.1	100.0	3.1	GmaAffx.22136.1.S1_at	BE821780	-	-	5e-3	At1g80170	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	H.G.	Please select
298.6	100.0	1.4	GmaAffx.30173.1.A1_at	AW349526	-	-	1e+1	At5g08400	unknown protein	O.I.	C.G.	H.G.	Please select
295.6	100.0	3.0	GmaAffx.91814.1.S1_at	CF807539	-	-	2e-2	At2g17710	unknown protein	O.I.	C.G.	H.G.	Please select
289.7	100.0	4.5	Gma.17190.1.S1_at	BQ628623	-	-	8e-14	At2g39710	aspartyl protease family protein	O.I.	C.G.	H.G.	Please select
288.0	100.0	44.3	GmaAffx.31772.1.S1_at	BG511824	-	-	3e+0	At3g11580	DNA-binding protein, putative	O.I.	C.G.	H.G.	Please select
287.9	100.0	15.4	Gma.16147.1.S1_at	BE473577	-	-	2e+0	At2g31005	-	O.I.	C.G.	H.G.	Please select
284.5	100.0	26.4	Gma.11025.1.S1_at	CD390437	-	-	2e-23	At2g45970	CYP86A8	O.I.	C.G.	H.G.	Please select
279.9	100.0	120.0	Gma.3562.1.S1_at	CD396847	chalcone isomerase 2	-	1e-1	At5g42680	unknown protein	O.I.	C.G.	H.G.	Please select
278.4	100.0	58.9	GmaAffx.22374.1.S1_at	BF595270	-	-	8e-1	At5g47900	unknown protein	O.I.	C.G.	H.G.	Please select
275.6	100.0	7.4	Gma.9106.1.S1_at	CA819871	-	-	9e-12	At5g45920	carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds	O.I.	C.G.	H.G.	Please select
274.3	100.0	0.9	GmaAffx.79591.1.A1_at	CD417428	-	-	1e+1	At5g25440	protein kinase family protein	O.I.	C.G.	H.G.	Please select
271.6	100.0	11.2	GmaAffx.54537.1.S1_at	BG551770	-	-	2e+0	At5g27290	unknown protein	O.I.	C.G.	H.G.	Please select
270.7	100.0	0.9	Gma.13579.1.A1_at	CD400915	-	-	7e-1	At4g04110	Toll-Interleukin-Resistance (TIR) domain-containing protein	O.I.	C.G.	H.G.	Please select
268.5	100.0	230.3	Gma.17885.1.S1_at	CD410373	-	-	3e+0	At5g58420	40S ribosomal protein S4 (RPS4D)	O.I.	C.G.	H.G.	Please select
260.9	100.0	0.2	GmaAffx.675.1.S1_at	BE820978	-	-	4e+0	At3g56010	unknown protein	O.I.	C.G.	H.G.	Please select
259.8	100.0	0.8	GmaAffx.90899.1.S1_at	CF806624	-	-	1e+0	At4g12970	unknown protein	O.I.	C.G.	H.G.	Please select
257.1	100.0	0.1	GmaAffx.5013.1.S1_at	BM092559	-	-	2e-13	At1g22640	MYB3 (MYB DOMAIN PROTEIN 3)	O.I.	C.G.	H.G.	Please select
255.0	100.0	1.7	Gma.578.3.A1_at	CD397179	-	-	3e+0	Atmg00820	-	O.I.	C.G.	H.G.	Please select
238.2	100.0	85.0	Gma.11290.2.A1_at	CD401637	-	-	7e-1	At3g53430	60S ribosomal protein L12 (RPL12B)	O.I.	C.G.	H.G.	Please select
234.3	100.0	7.2	Gma.6658.1.A1_at	AW309951	-	-	9e-1	At1g66100	thionin, putative	O.I.	C.G.	H.G.	Please select
230.9	100.0	2.1	GmaAffx.50999.1.S1_at	AW509187	-	-	5e+0	At5g54970	unknown protein	O.I.	C.G.	H.G.	Please select
230.2	100.0	0.3	Gma.2006.1.S1_at	BE023754	-	-	3e-39	At2g41540	GPDHC1	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage