Microarray experiments to specifically-expressed genes

GSM ID GSM201124
Assay name Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1
GSE experiment GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1646.2100.00.4GmaAffx.6271.1.S1_atCA799002--2e-1At5g38810F-box family proteinO.I.C.G.H.G.
1377.4100.07.3GmaAffx.34868.1.A1_atBU545422--3e+0At4g39990RABA4B (RAB GTPASE HOMOLOG A4B)O.I.C.G.H.G.
1319.9100.012.0GmaAffx.77748.1.S1_atBE059124--2e-1At1g77765unknown proteinO.I.C.G.H.G.
1272.7100.060.9GmaAffx.66407.1.A1_atBE822296--7e-1At5g67390unknown proteinO.I.C.G.H.G.
1250.3100.052.8Gma.5359.1.S1_atBM092603--1e+1At5g45350proline-rich family proteinO.I.C.G.H.G.
1193.9100.03.1GmaAffx.32258.1.S1_atBE820234--6e-2At1g75030ATLP-3O.I.C.G.H.G.
1180.8100.0119.8GmaAffx.67044.1.S1_atBE059104--2e+0At4g28780GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
1120.4100.00.1GmaAffx.29658.1.A1_atCD414165--3e+0At2g36325hydrolase, acting on ester bondsO.I.C.G.H.G.
1090.7100.00.0Gma.10661.1.S1_a_atBE659273--5e+0At5g65220ribosomal protein L29 family proteinO.I.C.G.H.G.
1049.8100.04.5GmaAffx.33377.1.A1_atBU544405--2e-1At1g22140unknown proteinO.I.C.G.H.G.
1043.4100.032.6Gma.103.1.S1_atAF024652.1polyphosphoinositide binding protein Ssh2p-4e-5At1g01630SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putativeO.I.C.G.H.G.
1040.9100.023.6GmaAffx.67373.1.S1_atBE659712--3e-1At2g15680calmodulin-related protein, putativeO.I.C.G.H.G.
1027.6100.017.3GmaAffx.7047.1.S1_atBE821991--9e-1At5g39210CRR7 (CHLORORESPIRATORY REDUCTION 7)O.I.C.G.H.G.
1016.8100.028.8Gma.10661.2.S1_atAW119498--1e+0At3g46320histone H4O.I.C.G.H.G.
951.4100.051.4Gma.12585.1.A1_atCD416173--4e+0At5g51120PABN1 (POLYADENYLATE-BINDING PROTEIN 1)O.I.C.G.H.G.
926.9100.091.0Gma.17066.1.S1_atAW185607--3e+0At5g25360unknown proteinO.I.C.G.H.G.
887.7100.025.3GmaAffx.58549.1.S1_atBE822360--1e-2At1g54320LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.C.G.H.G.
834.5100.024.6Gma.10032.1.S1_atCD418000--1e-10At2g29450ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)O.I.C.G.H.G.
800.4100.028.0GmaAffx.52594.1.S1_atBE058579--3e-4At1g17260AHA10 (Autoinhibited H(+)-ATPase isoform 10)O.I.C.G.H.G.
772.2100.099.3Gma.5267.1.S1_atBE610297--4e-4At5g56170-O.I.C.G.H.G.
764.6100.027.1GmaAffx.86037.1.S1_atBF597463--8e-1At5g11900eukaryotic translation initiation factor SUI1 family proteinO.I.C.G.H.G.
761.9100.073.7Gma.16969.1.S1_s_atBI968170--7e-8At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinO.I.C.G.H.G.
747.4100.08.4GmaAffx.56720.1.A1_atCD391617--1e-2At2g19480NAP1O.I.C.G.H.G.
720.8100.085.2GmaAffx.55240.1.S1_atBM092410--6e-1At4g24540AGL24 (AGAMOUS-LIKE 24)O.I.C.G.H.G.
717.5100.00.6GmaAffx.48250.1.S1_atAW396199MYB transcription factor MYB185-4e+0At5g15230GASA4 (GAST1 PROTEIN HOMOLOG 4)O.I.C.G.H.G.
687.1100.00.0GmaAffx.39483.1.A1_atBU544658MYB transcription factor MYB159-2e-4At4g38620MYB4O.I.C.G.H.G.
682.1100.014.2GmaAffx.34617.1.S1_s_atAW317127--8e+0At4g30470cinnamoyl-CoA reductase-relatedO.I.C.G.H.G.
681.5100.026.9Gma.6796.1.S1_atBU545053--1e-8At4g36880CP1 (CYSTEINE PROTEINASE1)O.I.C.G.H.G.
677.6100.014.6GmaAffx.49465.1.A1_atBE821938--3e+0At4g33750-O.I.C.G.H.G.
630.1100.00.6Gma.12804.1.A1_atCD390814--4e-2At5g21090leucine-rich repeat protein, putativeO.I.C.G.H.G.
616.9100.00.2Gma.7324.1.A1_atAW755302--8e-1At2g22340unknown proteinO.I.C.G.H.G.
612.9100.0140.2Gma.5313.1.S1_atAF167556.1dihydroflavonol-4-reductase DFR1-1e-14At5g42800DFR (DIHYDROFLAVONOL 4-REDUCTASE)O.I.C.G.H.G.
609.3100.00.9GmaAffx.75479.1.S1_atAW704774--4e+0At5g02020unknown proteinO.I.C.G.H.G.
605.3100.0149.7Gma.13259.2.S1_a_atAW277702MYB transcription factor MYB172-9e-4At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.C.G.H.G.
590.0100.01.7Gma.5902.1.S1_atBQ610302--8e-1At3g17190unknown proteinO.I.C.G.H.G.
569.7100.00.7Gma.6201.1.S1_atBQ612035--7e-1At5g06060tropinone reductase, putative / tropine dehydrogenase, putativeO.I.C.G.H.G.
566.6100.00.5Gma.9089.1.A1_atBU544319--9e-8At4g19640ARA7O.I.C.G.H.G.
552.3100.02.9GmaAffx.81219.1.A1_s_atBE822482--9e+0At3g49845-O.I.C.G.H.G.
550.8100.0142.0Gma.5461.1.S1_atBI941830flavanone 3-hydroxylase-2e-38At3g51240F3H (FLAVANONE 3-HYDROXYLASE)O.I.C.G.H.G.
530.0100.013.9GmaAffx.52704.2.S1_atAW153168WRKY29 protein-6e-1At2g26930ATCDPMEK (4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE)O.I.C.G.H.G.
526.5100.037.5GmaAffx.30709.1.S1_atBE059739--2e-1At1g35435-O.I.C.G.H.G.
506.0100.0149.8GmaAffx.43987.1.S1_atAW596871--5e-12At1g61720BAN (BANYULS)O.I.C.G.H.G.
501.2100.09.3Gma.15650.1.A1_atCD412516--3e+0At5g22870harpin-induced protein-related / HIN1-related / harpin-responsive protein-relatedO.I.C.G.H.G.
499.1100.0218.4Gma.1163.1.S1_atAW423421Anthocyanidin synthase-3e-21At4g22880LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)O.I.C.G.H.G.
486.6100.059.4GmaAffx.74402.1.A1_atBU544670--7e+0At3g0219060S ribosomal protein L39 (RPL39B)O.I.C.G.H.G.
476.9100.03.9GmaAffx.52514.1.S1_atAI856779--9e-1At5g55410protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
465.8100.06.3Gma.17190.1.S1_atBQ628623--8e-14At2g39710aspartyl protease family proteinO.I.C.G.H.G.
465.6100.02.1GmaAffx.74410.1.A1_atBU545158--3e-1At5g35475-O.I.C.G.H.G.
450.7100.034.4GmaAffx.60751.1.S1_atBE610338--1e+1At5g18160F-box family proteinO.I.C.G.H.G.
433.2100.025.3GmaAffx.65531.1.S1_atCA782932--3e-2At4g35160O-methyltransferase family 2 proteinO.I.C.G.H.G.
422.7100.07.5GmaAffx.33361.1.S1_atBU090994--9e-1At3g48580xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.C.G.H.G.
410.9100.00.6GmaAffx.80720.1.S1_atBE058910dihydroflavonol-4-reductase-8e-1At4g34265unknown proteinO.I.C.G.H.G.
409.0100.00.2GmaAffx.675.1.S1_atBE820978--4e+0At3g56010unknown proteinO.I.C.G.H.G.
396.4100.02.3Gma.14154.1.A1_atCD416538--1e+1At5g18037DNA bindingO.I.C.G.H.G.
394.2100.044.0Gma.17061.1.S1_atBE822282--9e-1At5g58000-O.I.C.G.H.G.
391.1100.0146.1Gma.3562.1.S1_atCD396847chalcone isomerase 2-1e-1At5g42680unknown proteinO.I.C.G.H.G.
379.1100.00.1Gma.14163.1.A1_atCD416882--3e+0At5g35870unknown proteinO.I.C.G.H.G.
374.0100.01.0GmaAffx.13635.1.S1_atBE658184--3e-1At3g49190condensation domain-containing proteinO.I.C.G.H.G.
368.2100.014.0Gma.16191.1.S1_atCD412156--1e-10At5g51950glucose-methanol-choline (GMC) oxidoreductase family proteinO.I.C.G.H.G.
364.1100.05.7GmaAffx.36979.1.S1_atBM092516--4e-1At1g80840WRKY40O.I.C.G.H.G.
360.5100.00.5GmaAffx.52704.1.A1_atBE659242WRKY29 protein-3e+0At5g53720RNA recognition motif (RRM)-containing proteinO.I.C.G.H.G.
354.3100.00.2GmaAffx.49459.1.A1_atBE821470--3e+0At3g02960copper-binding protein-relatedO.I.C.G.H.G.
350.3100.00.0Gma.5269.2.S1_atAW185902--2e-3At1g75300isoflavone reductase, putativeO.I.C.G.H.G.
347.7100.011.5GmaAffx.15861.1.S1_atCD418539--6e+0At4g02733-O.I.C.G.H.G.
347.7100.00.9GmaAffx.40574.1.S1_atBU926059--3e-1At4g14746-O.I.C.G.H.G.
347.0100.00.6GmaAffx.52704.3.S1_atAW423584WRKY29 protein-1e-2At2g37260TTG2 (TRANSPARENT TESTA GLABRA 2)O.I.C.G.H.G.
342.7100.00.2Gma.8533.1.S1_atBE608504MYB transcription factor MYB115-7e-5At2g16720MYB7 (MYB DOMAIN PROTEIN 7)O.I.C.G.H.G.
337.9100.011.7Gma.6488.1.S1_atBQ612355--2e-1At4g11870unknown proteinO.I.C.G.H.G.
321.9100.0240.8Gma.17885.1.S1_atCD410373--3e+0At5g5842040S ribosomal protein S4 (RPS4D)O.I.C.G.H.G.
317.8100.0150.4Gma.13259.1.A1_a_atBU545412MYB transcription factor MYB172-2e-5At1g01380ETC1 (ENHANCER OF TRY AND CPC 1)O.I.C.G.H.G.
313.2100.017.3GmaAffx.70494.1.A1_atCD397984--3e+0At2g15670-O.I.C.G.H.G.
312.5100.04.0Gma.12823.1.A1_atCD391552--7e-1At5g42500disease resistance-responsive family proteinO.I.C.G.H.G.
304.2100.013.1Gma.13009.1.S1_atCD400387--1e-1At1g78170unknown proteinO.I.C.G.H.G.
300.8100.00.6GmaAffx.47706.1.A1_atCD396118--2e-1At1g63410unknown proteinO.I.C.G.H.G.
295.7100.07.0Gma.9106.1.S1_atCA819871--9e-12At5g45920carboxylesterase/ hydrolase/ hydrolase, acting on ester bondsO.I.C.G.H.G.
288.9100.016.1GmaAffx.11228.1.A1_atCD417288--7e-1At2g45140PVA12 (PLANT VAP HOMOLOG 12)O.I.C.G.H.G.
288.9100.08.5GmaAffx.58555.1.S1_atBQ298550--8e-1At5g58800quinone reductase family proteinO.I.C.G.H.G.
287.6100.038.5GmaAffx.31772.1.S1_atBG511824--3e+0At3g11580DNA-binding protein, putativeO.I.C.G.H.G.
287.2100.02.6GmaAffx.22136.1.S1_atBE821780--5e-3At1g80170polygalacturonase, putative / pectinase, putativeO.I.C.G.H.G.
286.2100.02.6GmaAffx.91814.1.S1_atCF807539--2e-2At2g17710unknown proteinO.I.C.G.H.G.
285.3100.088.8Gma.11290.2.A1_atCD401637--7e-1At3g5343060S ribosomal protein L12 (RPL12B)O.I.C.G.H.G.
282.1100.06.2GmaAffx.3215.1.A1_atBE023704--1e+0At4g02910unknown proteinO.I.C.G.H.G.
281.6100.05.1Gma.8744.1.S1_atCD401553--9e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.C.G.H.G.
278.1100.03.1Gma.5290.1.S1_atBM092011--2e+0At3g15450unknown proteinO.I.C.G.H.G.
274.7100.06.9GmaAffx.29347.1.S1_atCA802338--7e-1At1g70840MLP31 (MLP-LIKE PROTEIN 31)O.I.C.G.H.G.
268.8100.04.6GmaAffx.1877.1.A1_atCD411016--1e-1At4g37240unknown proteinO.I.C.G.H.G.
267.4100.023.9GmaAffx.17279.1.S1_atBQ133933--1e+0At5g58630unknown proteinO.I.C.G.H.G.
267.3100.00.7GmaAffx.6001.1.S1_atBG511848--5e-2At5g06210RNA-binding protein, putativeO.I.C.G.H.G.
260.0100.02.1GmaAffx.50999.1.S1_atAW509187--5e+0At5g54970unknown proteinO.I.C.G.H.G.
255.7100.01.5Gma.578.3.A1_atCD397179--3e+0Atmg00820-O.I.C.G.H.G.
246.0100.04.0GmaAffx.70954.1.S1_atAW185165--3e-17At5g45130RHA1 (RAB HOMOLOG 1)O.I.C.G.H.G.
239.1100.00.7Gma.6597.1.S1_atBQ628516--6e+0At2g31335unknown proteinO.I.C.G.H.G.
238.8100.00.3GmaAffx.1301.2.A1_atCD405409--4e-15At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)O.I.C.G.H.G.
233.8100.02.8GmaAffx.22146.1.A1_atBG653381--3e-3At2g22970serine carboxypeptidase S10 family proteinO.I.C.G.H.G.
233.0100.043.0GmaAffx.22374.1.S1_atBF595270--8e-1At5g47900unknown proteinO.I.C.G.H.G.
230.2100.01.1GmaAffx.49458.1.S1_atAW395346--1e+0At3g07190-O.I.C.G.H.G.
226.4100.00.6GmaAffx.90899.1.S1_atCF806624--1e+0At4g12970unknown proteinO.I.C.G.H.G.
224.3100.08.1GmaAffx.54537.1.S1_atBG551770--2e+0At5g27290unknown proteinO.I.C.G.H.G.
223.0100.03.7GmaAffx.52963.1.S1_atAW310673--1e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.C.G.H.G.
222.3100.00.3Gma.10044.1.A1_atAI938084--2e-2At4g23880unknown proteinO.I.C.G.H.G.



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