Microarray experiments to specifically-expressed genes

GSM ID GSM201116
Assay name Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1
GSE experiment GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1472.6100.05.1GmaAffx.75094.1.A1_atCD407700--7e-1At2g41610unknown proteinO.I.C.G.H.G.
774.6100.0178.6Gma.11324.2.S1_atCD397701--1e-14At3g16240DELTA-TIPO.I.C.G.H.G.
769.8100.030.7Gma.5399.1.A1_atCD402231--1e+0At5g66250kinectin-relatedO.I.C.G.H.G.
762.0100.01.2GmaAffx.69470.1.S1_atBE803881--3e-1At5g03545unknown proteinO.I.C.G.H.G.
649.7100.02.7Gma.17329.1.S1_atAW568528--5e-11At1g11915unknown proteinO.I.C.G.H.G.
611.5100.017.0Gma.13905.1.A1_atCD409462--3e+0At5g03840TFL1 (TERMINAL FLOWER 1)O.I.C.G.H.G.
557.7100.03.9GmaAffx.38949.1.S1_s_atBQ295857--9e-1At5g58787zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
491.6100.048.5GmaAffx.11220.1.A1_atCD415475--7e-1At1g36640unknown proteinO.I.C.G.H.G.
478.7100.040.8Gma.3273.1.S1_atCD415617--9e-24At1g08465YAB2 (YABBY2)O.I.C.G.H.G.
464.0100.00.6GmaAffx.1873.1.A1_atBU550747--1e+0At4g33690unknown proteinO.I.C.G.H.G.
389.0100.01.1GmaAffx.2187.1.A1_atCD410025--4e-2At5g41530-O.I.C.G.H.G.
359.9100.093.0Gma.8528.1.S1_atAF116755.1seed maturation protein PM26-2e+0At3g49115unknown proteinO.I.C.G.H.G.
358.2100.055.7GmaAffx.30562.1.S1_atAW781063--3e+0At5g65530protein kinase, putativeO.I.C.G.H.G.
352.0100.09.3GmaAffx.60035.1.S1_atBM271340--5e-5At1g70370BURP domain-containing protein / polygalacturonase, putativeO.I.C.G.H.G.
344.4100.00.5Gma.7583.1.S1_atBU548804--7e+0Atcg00770-O.I.C.G.H.G.
337.7100.010.1Gma.9064.1.S1_atBE820331--1e+0At4g22800unknown proteinO.I.C.G.H.G.
321.9100.00.3GmaAffx.1859.1.A1_atBU549902--1e+0At5g54340zinc finger (C2H2 type) protein-relatedO.I.C.G.H.G.
313.2100.00.3GmaAffx.71961.1.A1_atBE657291--3e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.C.G.H.G.
306.1100.00.1GmaAffx.70540.1.A1_atCD409006--3e+0At3g55665-O.I.C.G.H.G.
306.0100.04.2Gma.9436.1.S1_atCA802734--3e-6At1g01700ROPGEF2O.I.C.G.H.G.
305.6100.019.1GmaAffx.25016.2.A1_atCD403548--5e-4At1g04820TUA4O.I.C.G.H.G.
293.1100.02.5Gma.5889.1.S1_atBQ610202--6e-2At1g53230TCP3O.I.C.G.H.G.
282.1100.00.6GmaAffx.49490.1.A1_atBE824429--2e-1At2g29050ATRBL1 (Arabidopsis thaliana Rhomboid-like 1)O.I.C.G.H.G.
282.0100.01.5Gma.14133.1.S1_atCD416164--8e-1At5g14890NHL repeat-containing proteinO.I.C.G.H.G.
279.1100.010.5GmaAffx.28218.1.S1_atBM307460--4e-1At5g25000unknown proteinO.I.C.G.H.G.
270.1100.01.2Gma.15547.2.A1_atCD415247--8e-13At4g34510KCS17 (3-KETOACYL-COA SYNTHASE 17)O.I.C.G.H.G.
265.0100.01.0GmaAffx.43705.1.S1_atAW279398--2e+0At1g19400unknown proteinO.I.C.G.H.G.
263.3100.027.8GmaAffx.10790.1.S1_atBU965333--3e-13At2g36570leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
251.0100.05.9Gma.13045.1.S1_atCD401609--1e-8At3g17790PAP17O.I.C.G.H.G.
240.6100.08.9GmaAffx.57640.1.S1_atAW569294--2e-1At1g54120unknown proteinO.I.C.G.H.G.
239.8100.03.0GmaAffx.26497.1.A1_atBE657393--7e-1At3g46120PAP19 (PURPLE ACID PHOSPHATASE 19)O.I.C.G.H.G.
226.7100.011.7GmaAffx.79779.2.S1_atBE608960--4e+0At3g1874060S ribosomal protein L30 (RPL30C)O.I.C.G.H.G.
221.3100.00.2GmaAffx.25366.1.S1_atAW100473--9e-10At2g34360antiporter/ drug transporter/ transporterO.I.C.G.H.G.
211.6100.00.2GmaAffx.39117.1.S1_atAW306492--2e+0At2g44360unknown proteinO.I.C.G.H.G.
208.8100.04.4Gma.4297.1.S1_atBM954372--1e-2At1g51620protein kinase family proteinO.I.C.G.H.G.
208.1100.00.7Gma.13908.1.A1_atBU546218--2e+0At2g33330PDLP3 (PLASMODESMATA-LOCATED PROTEIN 3)O.I.C.G.H.G.
208.0100.02.4GmaAffx.4389.2.S1_atBM309032--4e-7At5g01075beta-galactosidaseO.I.C.G.H.G.
206.0100.01.4GmaAffx.67563.1.A1_atBE823617--3e+0At5g47420-O.I.C.G.H.G.
197.4100.029.5Gma.15048.1.A1_atCD412960--1e-5At3g15680zinc finger (Ran-binding) family proteinO.I.C.G.H.G.
193.3100.06.2GmaAffx.26457.1.S1_atBE608818--3e+0At5g62280unknown proteinO.I.C.G.H.G.
191.6100.033.1Gma.4944.1.A1_atBI969954--7e-1At4g12990unknown proteinO.I.C.G.H.G.
190.3100.01.8Gma.12829.1.A1_atBE823760--3e+0At3g25855unknown proteinO.I.C.G.H.G.
185.6100.011.2GmaAffx.34013.1.A1_atCD404670--7e-1At1g72310ATL3O.I.C.G.H.G.
185.4100.08.2GmaAffx.3734.1.S1_atBE823581--5e-17At5g05410DREB2AO.I.C.G.H.G.
177.9100.03.2GmaAffx.50615.1.A1_atBI967648--3e+0At4g16080unknown proteinO.I.C.G.H.G.
175.4100.06.7Gma.17856.1.A1_atBE657438--2e-1At1g49310unknown proteinO.I.C.G.H.G.
169.3100.01.5Gma.8872.1.A1_atBE210539--5e-3At5g13460IQD11 (IQ-domain 11)O.I.C.G.H.G.
167.8100.02.8GmaAffx.58562.1.A1_atBE823246--7e-1At5g54210NLI interacting factor (NIF) family proteinO.I.C.G.H.G.
164.7100.00.2Gma.9656.1.S1_atCD401156--2e-16At1g08465YAB2 (YABBY2)O.I.C.G.H.G.
163.5100.023.6Gma.9206.1.A1_atBE658223--7e-1At1g60850ATRPAC42O.I.C.G.H.G.
162.2100.01.9Gma.391.1.A1_atAW349964--1e+1At5g58260-O.I.C.G.H.G.
161.0100.01.2GmaAffx.88235.1.S1_atBU926903--9e-1At1g56010NAC1O.I.C.G.H.G.
159.6100.00.8GmaAffx.67906.1.S1_atBG154963--5e+0At4g10940PHD finger family proteinO.I.C.G.H.G.
156.1100.040.8GmaAffx.21787.1.A1_atAW348555--6e-1At5g07580DNA binding / transcription factorO.I.C.G.H.G.
155.9100.027.9GmaAffx.35464.1.A1_atBE657554--3e+0At2g02026unknown proteinO.I.C.G.H.G.
152.0100.09.0GmaAffx.10562.1.A1_atBU549816--8e-1At5g06890-O.I.C.G.H.G.
151.5100.073.3GmaAffx.4389.1.A1_atBE823786--3e+0At5g06480MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.C.G.H.G.
147.0100.00.2GmaAffx.29628.1.A1_atCD408300--2e+0At5g11950protein homodimerizationO.I.C.G.H.G.
146.4100.00.4GmaAffx.59105.1.S1_atBI701935--1e-1At3g21400unknown proteinO.I.C.G.H.G.
143.1100.00.3Gma.12836.1.A1_atCD392001--3e-3At3g44735PSK1O.I.C.G.H.G.
141.3100.00.3Gma.9656.1.S1_x_atCD401156--2e-16At1g08465YAB2 (YABBY2)O.I.C.G.H.G.
137.8100.081.9Gma.3046.1.S1_atBQ741319--5e-20At4g22753SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3)O.I.C.G.H.G.
136.1100.07.1Gma.13085.1.S1_atCD395955--4e-45At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)O.I.C.G.H.G.
132.9100.035.8GmaAffx.56846.1.S1_atBG508287--1e+1Atmg01290-O.I.C.G.H.G.
128.6100.00.9GmaAffx.22687.1.S1_atBG508464--4e-1At1g21460nodulin MtN3 family proteinO.I.C.G.H.G.
127.3100.03.0Gma.12516.1.A1_atCD392779--2e-6At5g04490VTE5 (vitamin E pathway gene5)O.I.C.G.H.G.
124.6100.01.7Gma.11324.2.S1_a_atCD397701--1e-14At3g16240DELTA-TIPO.I.C.G.H.G.
124.1100.06.0Gma.14966.1.A1_atCD416359--3e-6At4g00430PIP1O.I.C.G.H.G.
123.6100.00.0GmaAffx.58326.1.A1_atBE657431--3e+0At1g49880Erv1/Alr family proteinO.I.C.G.H.G.
123.2100.011.4Gma.15577.1.S1_atCD399075--1e+0At4g26555immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.C.G.H.G.
121.0100.0136.4Gma.924.1.S1_atBF423953--8e-2At5g59030COPT1 (copper transporter 1)O.I.C.G.H.G.
120.9100.03.6Gma.7255.1.S1_atAW831640--4e+0At1g01880DNA repair protein, putativeO.I.C.G.H.G.
120.6100.065.2Gma.1880.1.A1_atBE658245--3e+0At5g43185Expressed proteinO.I.C.G.H.G.
117.1100.00.0GmaAffx.50685.1.A1_atBI972002--1e+1At5g41910RNA polymerase II mediator complex protein-relatedO.I.C.G.H.G.
116.5100.029.0GmaAffx.68432.1.S1_atBI426680--9e+0At5g38790unknown proteinO.I.C.G.H.G.
115.7100.09.1Gma.2865.1.S1_atCD390538--5e-29At2g26580YAB5 (YABBY5)O.I.C.G.H.G.
114.9100.04.4GmaAffx.35168.1.S1_atBE059000--9e+0At5g46530-O.I.C.G.H.G.
114.4100.09.7Gma.12634.1.A1_s_atCD393348transcription factor bZIP70-7e-1At1g20280homeobox-leucine zipper protein-relatedO.I.C.G.H.G.
112.9100.032.7Gma.12064.1.S1_atBG653777--1e-10At5g25900GA3 (GA REQUIRING 3)O.I.C.G.H.G.
109.5100.026.0GmaAffx.74676.2.S1_atBG653752--6e-5At1g77690LAX3 (LIKE AUX1 3)O.I.C.G.H.G.
109.3100.035.3Gma.16069.1.S1_atCD402521--1e+0At3g31415terpene synthase/cyclase family proteinO.I.C.G.H.G.
108.6100.0100.4GmaAffx.7258.1.S1_s_atAW398009--2e+0At2g19200unknown proteinO.I.C.G.H.G.
107.7100.014.5Gma.15965.1.S1_atCD409236--3e-1At2g18030peptide methionine sulfoxide reductase family proteinO.I.C.G.H.G.
106.9100.013.3Gma.12183.1.A1_s_atCD403146--8e-1At4g04745unknown proteinO.I.C.G.H.G.
106.6100.00.2GmaAffx.72.1.S1_atAI856282--2e+0At5g50090unknown proteinO.I.C.G.H.G.
106.4100.01.7Gma.5155.1.A1_atBI971134--5e+0At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.C.G.H.G.
105.0100.08.9Gma.13723.1.A1_atCD404536--1e+1At5g15265unknown proteinO.I.C.G.H.G.
104.0100.03.6Gma.14628.1.S1_atBI972227--4e-6At1g25510aspartyl protease family proteinO.I.C.G.H.G.
103.8100.00.9Gma.965.1.A1_atCD396007--5e+0At2g04845GCN5-related N-acetyltransferase (GNAT) family proteinO.I.C.G.H.G.
103.7100.00.1GmaAffx.84133.1.A1_atCD411236--3e-6At3g50890AtHB28 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 28)O.I.C.G.H.G.
103.5100.075.5Gma.6586.1.S1_atCA800380--1e-16At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.C.G.H.G.
103.3100.09.9Gma.12850.1.A1_atCD392632--8e+0At5g59740UDP-galactose/UDP-glucose transporter-relatedO.I.C.G.H.G.
103.2100.00.5GmaAffx.39134.1.S1_atAW311034--4e+0At4g31115unknown proteinO.I.C.G.H.G.
102.9100.00.9Gma.17318.1.S1_atBE823731--4e+0At5g61050histone deacetylase-related / HD-relatedO.I.C.G.H.G.
102.8100.015.7Gma.6484.1.A1_atBQ612123--1e+0At3g05425unknown proteinO.I.C.G.H.G.
102.7100.010.6Gma.1104.1.S1_atAW101582cytosolic glutamine synthetase gamma2-3e-89At5g37600ATGSR1O.I.C.G.H.G.
101.9100.026.2GmaAffx.84778.1.S1_atAW567674--4e+0At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)O.I.C.G.H.G.
100.9100.029.9Gma.15870.1.A1_atCD417955bZIP transcription factor bZIP17-1e+1At5g02800protein kinase family proteinO.I.C.G.H.G.
100.6100.03.1GmaAffx.45264.1.S1_atBG237839--5e-17At2g26730leucine-rich repeat transmembrane protein kinase, putativeO.I.C.G.H.G.
100.2100.06.5GmaAffx.50807.2.S1_atBF597569--4e-21At1g77590LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage