Microarray experiments to specifically-expressed genes

GSM ID GSM201113
Assay name Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2
GSE experiment GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1858.7100.04.5Gma.15763.1.A1_atCD411641--7e-1At5g42990UBC18 (ubiquitin-conjugating enzyme 18)O.I.C.G.H.G.
1161.5100.0208.2GmaAffx.43935.1.S1_atAW101592--1e-1At5g65660hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
880.9100.045.8Gma.9202.1.S1_atCD406986--4e-1At3g07370CHIP (CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN)O.I.C.G.H.G.
805.3100.021.4Gma.17856.1.A1_atBE657438--2e-1At1g49310unknown proteinO.I.C.G.H.G.
760.4100.00.2GmaAffx.45701.1.S1_atBI425795--7e-1At4g16090unknown proteinO.I.C.G.H.G.
721.8100.01.4GmaAffx.57480.1.S1_atAW394299--2e+0At3g16450jacalin lectin family proteinO.I.C.G.H.G.
715.3100.02.1Gma.12746.1.A1_atCD396327--4e+0At5g19070-O.I.C.G.H.G.
631.1100.07.7GmaAffx.36979.1.S1_atBM092516--4e-1At1g80840WRKY40O.I.C.G.H.G.
622.3100.03.9GmaAffx.70478.1.A1_atCD394306--3e+0At3g06740zinc finger (GATA type) family proteinO.I.C.G.H.G.
563.6100.0189.7Gma.3043.1.S1_atCD415603--3e+0At4g28170unknown proteinO.I.C.G.H.G.
541.4100.00.2Gma.13864.1.A1_atCD408281--7e-1At2g17720oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
537.6100.01.1Gma.13685.1.A1_atCD403371--2e-1At1g15160MATE efflux family proteinO.I.C.G.H.G.
498.4100.021.1GmaAffx.34013.1.A1_atCD404670--7e-1At1g72310ATL3O.I.C.G.H.G.
463.7100.01.3GmaAffx.56767.1.A1_atCD401785--2e-1At2g18920unknown proteinO.I.C.G.H.G.
442.4100.071.0Gma.11871.1.S1_atCD409660--8e-1At1g01520myb family transcription factorO.I.C.G.H.G.
440.4100.035.5Gma.15735.1.A1_atCD393331--2e-1At1g04660glycine-rich proteinO.I.C.G.H.G.
430.2100.00.8Gma.2800.1.S1_atBQ786043--2e-1At3g15110unknown proteinO.I.C.G.H.G.
383.2100.02.2GmaAffx.79500.1.A1_atCD398978--7e-1At1g15420unknown proteinO.I.C.G.H.G.
376.9100.0138.7Gma.1897.1.S1_s_atM36686.1glycinin G1-4e-3At5g66800unknown proteinO.I.C.G.H.G.
364.2100.015.8GmaAffx.11228.1.A1_atCD417288--7e-1At2g45140PVA12 (PLANT VAP HOMOLOG 12)O.I.C.G.H.G.
359.2100.05.9Gma.13662.1.S1_atCD402767--5e-24At5g53210SPCH (SPEECHLESS)O.I.C.G.H.G.
341.8100.012.0GmaAffx.8314.1.A1_atBE823544--7e-1At3g10750-O.I.C.G.H.G.
339.4100.00.3GmaAffx.28991.1.A1_atBU548137--1e+0At1g21830unknown proteinO.I.C.G.H.G.
322.5100.01.9Gma.9221.1.S1_atCD395134--1e+0At2g20480unknown proteinO.I.C.G.H.G.
304.4100.03.7Gma.13796.1.A1_atBE823562--3e+0At1g65483unknown proteinO.I.C.G.H.G.
303.2100.0102.7GmaAffx.4389.1.A1_atBE823786--3e+0At5g06480MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.C.G.H.G.
302.3100.03.7Gma.10073.1.A1_atCD415725--2e-2At3g04290LTL1 (LI-TOLERANT LIPASE 1)O.I.C.G.H.G.
296.7100.00.9GmaAffx.44978.1.S1_atBF325093--8e-1At2g17770ATBZIP27O.I.C.G.H.G.
274.8100.019.0Gma.2507.1.S1_atCD409747--2e-1At4g10850nodulin MtN3 family proteinO.I.C.G.H.G.
271.3100.013.2Gma.13058.1.A1_atCD394760--4e-4At1g11600CYP77B1O.I.C.G.H.G.
263.8100.029.1Gma.1002.1.A1_atCD394890--2e-2At5g17050UGT78D2 (UDP-GLUCOSYL TRANSFERASE 78D2)O.I.C.G.H.G.
262.8100.00.0GmaAffx.31588.1.S1_atBG154465--8e+0At5g58660oxidoreductase, 2OG-Fe(II) oxygenase family proteinO.I.C.G.H.G.
258.6100.0113.4Gma.15687.1.A1_atCD397262--3e-5At2g28080glycosyltransferase family proteinO.I.C.G.H.G.
257.0100.010.6GmaAffx.10562.1.A1_atBU549816--8e-1At5g06890-O.I.C.G.H.G.
254.8100.017.0GmaAffx.15664.1.S1_atBE607642--8e-1At1g76110high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing proteinO.I.C.G.H.G.
247.1100.00.2Gma.12365.2.S1_atBI942525--4e-1At2g36020HVA22J (HVA22-LIKE PROTEIN J)O.I.C.G.H.G.
244.6100.020.6GmaAffx.59986.1.A1_atBE658693--1e+1Atmg00650-O.I.C.G.H.G.
243.2100.01.0Gma.17696.1.S1_atBE804617--3e+0At3g18460unknown proteinO.I.C.G.H.G.
238.6100.0161.6Gma.2942.1.S1_atAW317871--1e+0At5g36700PGLP1 (2-PHOSPHOGLYCOLATE PHOSPHATASE 1)O.I.C.G.H.G.
237.0100.011.0GmaAffx.4776.1.A1_atBU548404--1e+0At5g66590allergen V5/Tpx-1-related family proteinO.I.C.G.H.G.
228.1100.02.9GmaAffx.35671.1.A1_atBE823653--3e+0At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.C.G.H.G.
223.6100.01.2GmaAffx.17924.1.S1_atBG157338--6e-2At4g37470hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
222.2100.01.3GmaAffx.87477.1.S1_atBU926281--9e-2At3g24450copper-binding family proteinO.I.C.G.H.G.
221.0100.0307.0Gma.7113.1.S1_atU71195.1napin-type 2S albumin 3-5e-4At3g17160unknown proteinO.I.C.G.H.G.
219.2100.082.4Gma.9072.1.S1_atCA802814--3e-4At5g13930TT4 (TRANSPARENT TESTA 4)O.I.C.G.H.G.
217.5100.00.1GmaAffx.70535.1.A1_atCD408224--7e-1At4g32717SCRL24 (SCR-Like 24)O.I.C.G.H.G.
215.5100.06.1Gma.724.1.S1_atBE658675--2e-1At1g31460unknown proteinO.I.C.G.H.G.
212.3100.00.1Gma.12904.1.A1_atBE823234--3e-9At4g26940galactosyltransferase family proteinO.I.C.G.H.G.
211.7100.017.3Gma.3005.1.S1_atBM270319--2e+0At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeO.I.C.G.H.G.
207.2100.00.1GmaAffx.6027.1.A1_atBU550776--5e+0At1g47410unknown proteinO.I.C.G.H.G.
204.5100.0198.0Gma.917.1.S1_atBM732969--5e-3At2g14900gibberellin-regulated family proteinO.I.C.G.H.G.
202.7100.01.3Gma.226.1.A1_atX60772.124 kDa oleosin isoform-4e-1At5g64850unknown proteinO.I.C.G.H.G.
199.4100.00.0PsAffx.C69000074_atPsAffx.C69000074--8e-2At3g03460unknown proteinO.I.C.G.H.G.
198.7100.00.1GmaAffx.43904.1.S1_atAW508443--7e-1At5g28610-O.I.C.G.H.G.
194.8100.021.5Gma.13058.1.A1_s_atCD394760--4e-4At1g11600CYP77B1O.I.C.G.H.G.
191.5100.0173.8Gma.5294.1.S1_atBE658252--2e-6At5g59845gibberellin-regulated family proteinO.I.C.G.H.G.
187.7100.018.2Gma.2286.1.S1_atBI094996bZIP transcription factor bZIP132-5e+0At2g35585unknown proteinO.I.C.G.H.G.
185.9100.0308.5GmaAffx.75778.1.S1_atBM270359--9e-2At5g07550GRP19 (GLYCINE-RICH PROTEIN 19)O.I.C.G.H.G.
185.7100.00.1GmaAffx.42464.1.S1_atBM893519--5e-2At4g17710HDG4 (HOMEODOMAIN GLABROUS 4)O.I.C.G.H.G.
185.2100.00.2Gma.6275.1.S1_atBQ612625--6e+0At5g51870AGL71 (AGAMOUS-LIKE 71)O.I.C.G.H.G.
184.1100.01.7Gma.15792.1.S1_atCD405959--5e-2At2g37700catalytic/ iron ion binding / oxidoreductaseO.I.C.G.H.G.
183.5100.00.9GmaAffx.60916.1.S1_atBU761525--2e+0At2g23321unknown proteinO.I.C.G.H.G.
179.8100.00.3GmaAffx.8405.1.A1_atBU548948--1e+0At2g38340AP2 domain-containing transcription factor, putative (DRE2B)O.I.C.G.H.G.
179.6100.094.6Gma.2857.1.S1_atBG551684--1e-18At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
177.4100.018.6Gma.13747.1.A1_atCD404869--2e+0At5g16120hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
176.6100.00.5Gma.3812.1.A1_atBI470669--2e-1At5g08150unknown proteinO.I.C.G.H.G.
175.9100.00.1GmaAffx.11954.1.S1_atAW459566--2e-1At3g06730thioredoxin family proteinO.I.C.G.H.G.
174.4100.03.3Gma.5977.1.S1_atBQ610748--8e-1At2g29660zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
172.1100.075.7Gma.10066.1.S1_atCD407893--5e-4At3g26960unknown proteinO.I.C.G.H.G.
172.0100.06.0Gma.10447.1.S1_atAW734913--3e-5At4g00350MATE efflux family proteinO.I.C.G.H.G.
171.3100.0133.3Gma.10689.1.S1_atAW471758--5e-1At5g61230ankyrin repeat family proteinO.I.C.G.H.G.
169.9100.02.6Gma.13015.1.A1_atCD398822--3e-1At1g75430BLH11 (BEL1-LIKE HOMEODOMAIN 11)O.I.C.G.H.G.
169.1100.04.7Gma.5399.1.A1_atCD402231--1e+0At5g66250kinectin-relatedO.I.C.G.H.G.
165.9100.03.0Gma.8777.1.A1_atBI968261--1e+0At5g55790unknown proteinO.I.C.G.H.G.
164.2100.0311.9Gma.436.1.S1_atCD398858hypothetical LOC547938-3e-1At3g50550unknown proteinO.I.C.G.H.G.
160.0100.00.1GmaAffx.17461.1.A1_atBE820943--4e-1At1g7921020S proteasome alpha subunit B, putativeO.I.C.G.H.G.
159.4100.01.6GmaAffx.66666.1.S1_atBE824120--2e-1At5g61280remorin family proteinO.I.C.G.H.G.
159.3100.037.9Gma.4898.1.A1_atBQ295808--5e-16At4g03415catalytic/ protein serine/threonine phosphataseO.I.C.G.H.G.
157.6100.029.8GmaAffx.71108.1.A1_atAW348334--6e-1At3g15270SPL5 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5)O.I.C.G.H.G.
155.3100.00.0PsAffx.C61000002_s_atPsAffx.C61000002--2e+0At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)O.I.C.G.H.G.
152.6100.00.2Gma.10044.1.A1_atAI938084--2e-2At4g23880unknown proteinO.I.C.G.H.G.
148.5100.08.6GmaAffx.23647.1.S1_atBM308200--3e+0At5g46115unknown proteinO.I.C.G.H.G.
147.7100.09.7Gma.9785.1.A1_atCD402148--2e-1At5g41720-O.I.C.G.H.G.
145.8100.023.0Gma.18014.1.S1_a_atCD398126--2e-1At2g42840PDF1 (PROTODERMAL FACTOR 1)O.I.C.G.H.G.
145.6100.00.0Gma.13914.1.A1_atCD409946--2e-1At5g40330MYB23 (MYB DOMAIN PROTEIN 23)O.I.C.G.H.G.
144.9100.0101.4Gma.1880.1.A1_x_atBE658245--3e+0At5g43185Expressed proteinO.I.C.G.H.G.
144.1100.00.0GmaAffx.11454.1.S1_atAI959876--1e+0At3g25070RIN4 (RPM1 INTERACTING PROTEIN 4)O.I.C.G.H.G.
141.7100.026.0Gma.17938.1.S1_atAW567607--9e+0At5g37760DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
139.1100.00.4GmaAffx.78895.1.A1_atBU548273--3e-1At4g12440adenine phosphoribosyltransferase, putativeO.I.C.G.H.G.
138.5100.013.9GmaAffx.53018.1.S1_atAW471840--2e+0At5g56480protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
137.4100.00.4GmaAffx.51983.1.S1_atCA799368--2e-7At2g01505CLE16 (CLAVATA3/ESR-RELATED 16)O.I.C.G.H.G.
137.0100.087.7Gma.7832.1.S1_s_atCD392810--1e-37At1g68530KCS6 (3-KETOACYL-COA SYNTHASE 6)O.I.C.G.H.G.
133.6100.01.7GmaAffx.83319.1.S1_atBU081287--3e+0At3g57390AGL18O.I.C.G.H.G.
133.2100.0265.9Gma.1833.1.S1_atBE823692--1e+0At1g24240ribosomal protein L19 family proteinO.I.C.G.H.G.
132.5100.027.6Gma.957.1.S1_atCD396846--2e-3At1g22900-O.I.C.G.H.G.
131.3100.00.4GmaAffx.21079.1.A1_atBE657297--2e-1At2g33330PDLP3 (PLASMODESMATA-LOCATED PROTEIN 3)O.I.C.G.H.G.
130.5100.01.8GmaAffx.52337.1.A1_atCD413673--3e+0At2g25185-O.I.C.G.H.G.
129.7100.04.2GmaAffx.51348.1.S1_atBQ297083--2e-1At4g05410transducin family protein / WD-40 repeat family proteinO.I.C.G.H.G.
128.2100.0111.7Gma.959.1.S1_atBM270102--2e+0At3g06035unknown proteinO.I.C.G.H.G.
127.6100.00.1GmaAffx.1330.1.S1_atBI971528--1e+0At3g52190PHF1 (PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1)O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage