Microarray experiments to specifically-expressed genes

GSM ID GSM201110
Assay name Laser capture microdissected (LCM) cotyledon abaxial parenchyma at the early maturation stage, biological replicate 1
GSE experiment GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
912.6100.010.2GmaAffx.85643.1.A1_atBE6614147s seed storage protein alpha & alpha' subunits mrna from gmc-alpha'-alpha 32-2e-1At4g27660unknown proteinO.I.C.G.H.G.
879.2100.029.5GmaAffx.35168.1.S1_atBE059000--9e+0At5g46530-O.I.C.G.H.G.
850.8100.00.4Gma.8746.1.S1_atJ01294.17s seed storage protein alpha & alpha' subunits mrna from gmc-alpha'-alpha 32-5e-1At2g37380unknown proteinO.I.C.G.H.G.
786.4100.07.9Gma.16834.1.A1_s_atJ01292.17s seed storage protein alpha subunit mrna (b), from gmc-alpha'-alpha 236-1e-1At3g61240DEAD/DEAH box helicase, putative (RH12)O.I.C.G.H.G.
761.6100.0121.3GmaAffx.21924.1.S1_atBQ611867--2e-1At2g30490C4H (CINNAMATE-4-HYDROXYLASE)O.I.C.G.H.G.
586.1100.0109.9GmaAffx.5167.1.S1_atBM270813--6e-1At1g50010TUA2O.I.C.G.H.G.
580.7100.01.9Gma.1870.1.A1_atU11260.1Bowman-Birk protease inhibitor-2e+0At3g55672-O.I.C.G.H.G.
506.0100.030.2Gma.11970.1.S1_atBF595816--7e-1At2g24480zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
481.0100.02.5Gma.17805.1.A1_s_atBI968729--3e+0At5g05690CPD (CONSTITUTIVE PHOTOMORPHOGENIC DWARF)O.I.C.G.H.G.
441.3100.01.8Gma.15692.1.A1_atCD405847--4e+0At2g19360unknown proteinO.I.C.G.H.G.
410.4100.06.6GmaAffx.44840.1.A1_atAW471584--4e-1At1g69310WRKY57O.I.C.G.H.G.
373.5100.00.3GmaAffx.71961.1.A1_atBE657291--3e+0At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.C.G.H.G.
329.1100.03.2Gma.5139.1.S1_atAF243376.1glutathione S-transferase GST 21-3e-2At3g05270-O.I.C.G.H.G.
326.2100.0203.7GmaAffx.86095.1.S1_atBF595997--4e-1At1g22900-O.I.C.G.H.G.
320.3100.0165.1Gma.1490.1.S1_atAB000097.1class III acidic endochitinase-6e-1At5g24090acidic endochitinase (CHIB1)O.I.C.G.H.G.
316.5100.02.0Gma.16834.1.A1_atJ01292.17s seed storage protein alpha subunit mrna (b), from gmc-alpha'-alpha 236-1e-1At3g61240DEAD/DEAH box helicase, putative (RH12)O.I.C.G.H.G.
310.3100.03.4GmaAffx.26497.1.A1_atBE657393--7e-1At3g46120PAP19 (PURPLE ACID PHOSPHATASE 19)O.I.C.G.H.G.
292.1100.053.6Gma.2406.1.S1_atAW350817--2e-16At3g16240DELTA-TIPO.I.C.G.H.G.
291.5100.03.1Gma.13755.1.A1_atCD405220--3e-3At3g29260short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
289.6100.00.5GmaAffx.89113.1.A1_atCK605611Nodulin-26-1e-26At2g36830GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN)O.I.C.G.H.G.
286.4100.0218.7Gma.1857.1.S1_s_atD00216.1A2B1a precursor-1e-3At3g50550unknown proteinO.I.C.G.H.G.
263.3100.00.7GmaAffx.86456.1.S1_atBG649892--1e+0At5g43460lesion inducing protein-relatedO.I.C.G.H.G.
245.7100.011.7Gma.5355.1.A1_atBE658234selenium binding protein-2e-8At3g23800SBP3 (selenium-binding protein 3)O.I.C.G.H.G.
234.2100.06.4GmaAffx.25072.1.A1_atCD418032--1e+1At5g44306unknown proteinO.I.C.G.H.G.
234.1100.05.5GmaAffx.35948.1.A1_atBG042249--1e-5At2g16430PAP10 (PURPLE ACID PHOSPHATASE 10)O.I.C.G.H.G.
222.6100.015.4Gma.2865.1.S1_atCD390538--5e-29At2g26580YAB5 (YABBY5)O.I.C.G.H.G.
220.7100.059.3GmaAffx.93571.1.S1_s_atCF809296--3e+0At3g53990universal stress protein (USP) family proteinO.I.C.G.H.G.
219.0100.04.5Gma.13045.1.S1_atCD401609--1e-8At3g17790PAP17O.I.C.G.H.G.
218.2100.00.2GmaAffx.25612.1.S1_atAW317577--8e+0At5g47870unknown proteinO.I.C.G.H.G.
217.6100.0100.0Gma.1897.1.S1_s_atM36686.1glycinin G1-4e-3At5g66800unknown proteinO.I.C.G.H.G.
212.7100.0297.5Gma.10770.1.S1_atBE822993--2e+0At2g19760PRF1 (PROFILIN 1)O.I.C.G.H.G.
211.8100.00.9Gma.6493.1.S1_atBQ612446--3e+0At5g52760heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
211.0100.0278.4Gma.1897.1.S1_atM36686.1glycinin G1-4e-3At5g66800unknown proteinO.I.C.G.H.G.
205.9100.077.5Gma.1816.1.S1_atJ05560.134 kDa maturing seed vacuolar thiol protease precursor-2e-1At3g19400cysteine proteinase, putativeO.I.C.G.H.G.
202.2100.08.8GmaAffx.8314.1.A1_atBE823544--7e-1At3g10750-O.I.C.G.H.G.
195.8100.04.0GmaAffx.27056.1.S1_atBG154596--3e+0At3g23220DNA binding / transcription factorO.I.C.G.H.G.
195.8100.00.5GmaAffx.11559.1.A1_atAW100581--2e+0At1g62760invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
192.2100.01.6Gma.1883.1.S1_atBE823069--4e+0At3g02940MYB107 (myb domain protein 107)O.I.C.G.H.G.
190.9100.09.1Gma.13931.1.A1_atCD410679--1e+0At3g03100NADH:ubiquinone oxidoreductase family proteinO.I.C.G.H.G.
183.9100.0181.1Gma.1870.1.S1_s_atU11260.1Bowman-Birk protease inhibitor-2e+0At3g55672-O.I.C.G.H.G.
183.5100.01.5Gma.226.1.A1_atX60772.124 kDa oleosin isoform-4e-1At5g64850unknown proteinO.I.C.G.H.G.
177.6100.017.4Gma.12048.1.S1_atBG551606--2e-1At2g29440ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)O.I.C.G.H.G.
170.7100.00.1GmaAffx.43904.1.S1_atAW508443--7e-1At5g28610-O.I.C.G.H.G.
167.7100.0206.1Gma.13030.3.S1_atBI094850--2e+0At1g20405unknown proteinO.I.C.G.H.G.
165.0100.0256.2Gma.2270.1.S1_s_atAB030838.1beta-conglycinin alpha-subunit /// prepro-polypeptide (AA -22 to 583) /// beta-conglycinin alpha prime subunit /// beta-conglycinin alpha subunit-1e+0At4g27660unknown proteinO.I.C.G.H.G.
162.2100.00.5Gma.14675.1.S1_atAW423710--2e+0At5g53730harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.C.G.H.G.
161.6100.02.3Gma.9710.1.A1_atCA934978--3e+0At5g55650unknown proteinO.I.C.G.H.G.
158.2100.01.2GmaAffx.789.1.A1_atBE823574--2e-1At3g29100VTI13O.I.C.G.H.G.
156.0100.03.1GmaAffx.4788.2.S1_atBM270692--7e-3At5g49700DNA-binding protein-relatedO.I.C.G.H.G.
153.7100.00.5GmaAffx.19194.1.S1_atBM568005--3e+0At2g20690lumazine-binding family proteinO.I.C.G.H.G.
147.9100.08.2Gma.8414.1.S1_atAF007100.1biotin carboxylase precursor-0At5g35360CAC2O.I.C.G.H.G.
141.4100.0148.8Gma.13030.1.S1_a_atAI748012Kunitz trypsin inhibitor-4e-1At1g02210regulator of shoot apical meristem-relatedO.I.C.G.H.G.
141.3100.060.4Gma.2542.1.S1_atCD409405--5e-42At4g27440PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B)O.I.C.G.H.G.
139.5100.065.9Gma.1880.1.A1_atBE658245--3e+0At5g43185Expressed proteinO.I.C.G.H.G.
138.6100.01.6Gma.17032.1.S1_atAW397732--7e-4At5g44360FAD-binding domain-containing proteinO.I.C.G.H.G.
138.2100.0111.7GmaAffx.7258.1.S1_s_atAW398009--2e+0At2g19200unknown proteinO.I.C.G.H.G.
137.7100.093.7Gma.1839.1.S1_atL43920.1microsomal omega-6 desaturase-3e-12At3g12120FAD2 (FATTY ACID DESATURASE 2)O.I.C.G.H.G.
137.5100.01.1Gma.1955.4.A1_atBQ740598--2e-1At4g21280oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ)O.I.C.G.H.G.
136.4100.0235.7Gma.1898.1.S1_atM20733.1Bowman-Birk proteinase isoinhibitor D-II /// protease inhibitor IV-2e-2At2g43430GLX2-1 (GLYOXALASE 2-1)O.I.C.G.H.G.
134.0100.00.2GmaAffx.1301.2.A1_atCD405409--4e-15At1g67090RBCS1A (RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A)O.I.C.G.H.G.
133.6100.05.7Gma.8645.1.S1_atBU760658--2e-12At1g60660CB5LP (CYTOCHROME B5-LIKE PROTEIN)O.I.C.G.H.G.
133.1100.0131.1Gma.924.1.S1_atBF423953--8e-2At5g59030COPT1 (copper transporter 1)O.I.C.G.H.G.
132.2100.02.7Gma.12516.1.A1_atCD392779--2e-6At5g04490VTE5 (vitamin E pathway gene5)O.I.C.G.H.G.
130.3100.00.3Gma.13581.1.A1_atCD400971--7e-1At5g30490-O.I.C.G.H.G.
128.1100.05.0GmaAffx.3734.1.S1_atBE823581--5e-17At5g05410DREB2AO.I.C.G.H.G.
126.2100.00.1Gma.11861.1.A1_atBG510544--2e-1At4g09890unknown proteinO.I.C.G.H.G.
126.0100.06.6GmaAffx.56750.1.S1_atCD395876--4e+0At5g20090unknown proteinO.I.C.G.H.G.
124.7100.05.3Gma.17099.1.S1_atAW317691--7e-1At1g64800DNA binding / transcription factorO.I.C.G.H.G.
124.2100.00.3Gma.4316.1.S1_atBF008767--4e+0At4g18930cyclic phosphodiesteraseO.I.C.G.H.G.
124.0100.0170.1Gma.685.1.S1_atAF160197.1Ni-binding urease accessory protein UreG-1e-69At2g34470UREG (UREASE ACCESSORY PROTEIN G)O.I.C.G.H.G.
121.9100.074.2Gma.1872.1.S1_atL06038.1--2e-1At5g27247unknown proteinO.I.C.G.H.G.
121.2100.00.1GmaAffx.65503.1.S1_atBE820873--4e-1At1g10500ATCPISCA (chloroplast-localized IscA-like protein)O.I.C.G.H.G.
120.1100.079.0Gma.2857.1.S1_atBG551684--1e-18At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
118.8100.00.8GmaAffx.65842.1.A1_atCD396585--8e+0At5g41090anac095 (Arabidopsis NAC domain containing protein 95)O.I.C.G.H.G.
117.5100.061.2GmaAffx.86588.1.S1_atBE824280--2e+0At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
117.0100.02.0GmaAffx.2436.1.A1_atAI988043--2e-1At4g07670protease-associated (PA) domain-containing proteinO.I.C.G.H.G.
116.0100.06.6GmaAffx.50807.2.S1_atBF597569--4e-21At1g77590LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)O.I.C.G.H.G.
115.3100.0102.5Gma.18051.1.S1_atBE819850Soybean Bowman-Birk proteinase inhibitor /// Bowman-Birk proteinase inhibitor /// Bowman-Birk proteinase inhibitor /// Bowman-Birk protease inhibitor-3e-1At2g42975unknown proteinO.I.C.G.H.G.
114.8100.081.8Gma.838.1.S1_atBE821823--5e-1At5g49360BXL1 (BETA-XYLOSIDASE 1)O.I.C.G.H.G.
114.5100.00.0HgAffx.19161.1.S1_atCB299540--2e-1At1g54140TAFII21 (TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT)O.I.C.G.H.G.
113.9100.028.8Gma.12064.1.S1_atBG653777--1e-10At5g25900GA3 (GA REQUIRING 3)O.I.C.G.H.G.
113.8100.058.7Gma.1857.1.S1_atD00216.1A2B1a precursor-1e-3At3g50550unknown proteinO.I.C.G.H.G.
113.1100.010.5Gma.7025.1.S1_atCD396615--4e-23At3g26744ICE1 (INDUCER OF CBF EXPRESSION 1)O.I.C.G.H.G.
113.0100.01.3Gma.14186.1.A1_atCD417215--3e+0At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.C.G.H.G.
112.0100.00.1GmaAffx.8029.1.S1_atBE609888--6e-1At5g45428CPuORF24 (Conserved peptide upstream open reading frame 24)O.I.C.G.H.G.
110.9100.02.0Gma.1835.1.S1_atBG551332--8e-3At3g61870unknown proteinO.I.C.G.H.G.
109.9100.024.7GmaAffx.84778.1.S1_atAW567674--4e+0At2g29420ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)O.I.C.G.H.G.
109.9100.00.9GmaAffx.35624.1.A1_atBE819886--3e+0At4g38495-O.I.C.G.H.G.
109.3100.04.8GmaAffx.12369.1.A1_atCD412820--2e-1At4g21790TOM1 (TOBAMOVIRUS MULTIPLICATION 1)O.I.C.G.H.G.
108.8100.03.0Gma.964.1.A1_atBE824146--3e+0At3g62400unknown proteinO.I.C.G.H.G.
108.3100.00.3GmaAffx.65802.1.S1_atBF324845--2e+0At3g19530unknown proteinO.I.C.G.H.G.
107.2100.01.8GmaAffx.26813.1.A1_atAW311155--3e+0At2g31180MYB14 (MYB DOMAIN PROTEIN 14)O.I.C.G.H.G.
106.8100.02.0GmaAffx.81444.1.S1_atBF596240--3e+0At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.C.G.H.G.
106.6100.00.9GmaAffx.31231.1.S1_atBE823860--2e-2At3g25700chloroplast nucleoid DNA-binding protein-relatedO.I.C.G.H.G.
106.5100.07.0Gma.7688.1.S1_atBG654008--4e-27At5g03300ADK2 (ADENOSINE KINASE 2)O.I.C.G.H.G.
106.3100.044.4Gma.16405.1.A1_atCD400314--3e+0At5g61680pectinesterase family proteinO.I.C.G.H.G.
106.0100.08.6GmaAffx.25768.1.S1_atBE824157--4e-1At5g42500disease resistance-responsive family proteinO.I.C.G.H.G.
105.4100.00.1Gma.13616.1.A1_atCD401662--3e+0At5g38110ASF1B (ANTI- SILENCING FUNCTION 1B)O.I.C.G.H.G.
105.2100.049.1Gma.432.1.S1_atAY230157.1Eu4=urease {clone 5E5} [Glycine max=soybeans, cv. Dare, mid-maturation embryos, mRNA Partial, 540 nt]-4e-50At1g67550URE (UREASE)O.I.C.G.H.G.
104.2100.081.2Gma.1494.1.S1_x_atBF598755auxin down regulated-3e-3At3g22120CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)O.I.C.G.H.G.



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