Microarray experiments to specifically-expressed genes

GSM ID GSM201106
Assay name Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1
GSE experiment GSE8112: Expression data from soybean seed compartments with embryos at the early maturation stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
1090.3100.04.4GmaAffx.2999.1.A1_atAW705849--8e-1At5g25460unknown proteinO.I.C.G.H.G.
949.3100.015.0Gma.9696.1.S1_atAW317636--3e-4At5g22580-O.I.C.G.H.G.
937.3100.020545.4soybean_rRNA_1057_atsoybean_rRNA_1057--1e+0At1g66700PXMT1O.I.C.G.H.G.
770.0100.00.8GmaAffx.2187.1.A1_atCD410025--4e-2At5g41530-O.I.C.G.H.G.
694.2100.04.2Gma.8466.1.S1_atCD409663--1e-24At1g46264AT-HSFB4O.I.C.G.H.G.
539.5100.00.2Gma.8953.1.S1_atBU764603--5e-2At5g15660F-box family proteinO.I.C.G.H.G.
532.1100.0189.3GmaAffx.66676.1.S1_atBQ610288--8e-27At1g75500nodulin MtN21 family proteinO.I.C.G.H.G.
451.7100.02.4GmaAffx.20514.1.A1_atAI442824--6e-8At3g02000ROXY1O.I.C.G.H.G.
433.9100.02.4Gma.5155.1.A1_atBI971134--5e+0At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.C.G.H.G.
386.8100.00.5Gma.12679.1.A1_atCD394578--7e-1At4g10880unknown proteinO.I.C.G.H.G.
382.9100.0109.6Gma.11336.2.S1_atCA852094--1e-5At1g73620thaumatin-like protein, putative / pathogenesis-related protein, putativeO.I.C.G.H.G.
381.2100.00.1GmaAffx.25366.1.S1_atAW100473--9e-10At2g34360antiporter/ drug transporter/ transporterO.I.C.G.H.G.
366.7100.01.9GmaAffx.4029.1.S1_atBG044865--2e-24At2g34850MEE25 (maternal effect embryo arrest 25)O.I.C.G.H.G.
363.0100.034.9GmaAffx.56846.1.S1_atBG508287--1e+1Atmg01290-O.I.C.G.H.G.
337.1100.00.1GmaAffx.43904.1.S1_atAW508443--7e-1At5g28610-O.I.C.G.H.G.
316.9100.00.0HgAffx.15243.1.A1_atBI748639--1e-1At1g28310Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
315.9100.00.0GmaAffx.2032.1.S1_atCA799310--4e+0At4g31360selenium bindingO.I.C.G.H.G.
309.8100.04.1GmaAffx.57640.1.S1_atAW569294--2e-1At1g54120unknown proteinO.I.C.G.H.G.
297.6100.01.0GmaAffx.31231.1.S1_atBE823860--2e-2At3g25700chloroplast nucleoid DNA-binding protein-relatedO.I.C.G.H.G.
295.5100.00.0HgAffx.3363.1.A1_atCK349327--8e-2At1g52070jacalin lectin family proteinO.I.C.G.H.G.
285.2100.08.9Gma.8570.1.S1_atBU765697--4e+0At3g63330protein kinase family proteinO.I.C.G.H.G.
275.8100.00.4GmaAffx.78607.1.S1_atBQ611735--3e+1Atcg00770-O.I.C.G.H.G.
266.9100.00.7GmaAffx.56154.1.A1_atBU547113--5e+0At5g62850AtVEX1 (VEGETATIVE CELL EXPRESSED1)O.I.C.G.H.G.
265.8100.037.2Gma.4628.2.S1_atAW472384--1e-1At1g66540cytochrome P450, putativeO.I.C.G.H.G.
256.4100.00.0HgAffx.9107.1.S1_atCB379394--1e+0At3g61250AtMYB17 (myb domain protein 17)O.I.C.G.H.G.
253.1100.0355.5GmaAffx.54955.1.S1_atBI786528dehydrin-3e-10At5g12210geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putativeO.I.C.G.H.G.
250.5100.04.7Gma.13085.1.S1_atCD395955--4e-45At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)O.I.C.G.H.G.
243.1100.00.1Gma.1501.2.S1_atAW424053--1e+0At5g20020RAN2O.I.C.G.H.G.
240.3100.027.0GmaAffx.1184.1.S1_s_atBI470180--5e+0At4g26070MEK1 (MAP KINASE/ ERK KINASE 1)O.I.C.G.H.G.
234.3100.0171.9GmaAffx.1301.121.A1_s_atCD394418--1e-2At4g19905LCR38 (Low-molecular-weight cysteine-rich 38)O.I.C.G.H.G.
230.9100.00.4Gma.15547.2.A1_atCD415247--8e-13At4g34510KCS17 (3-KETOACYL-COA SYNTHASE 17)O.I.C.G.H.G.
225.8100.0226.5GmaAffx.79733.1.S1_s_atAI748104Kunitz trypsin inhibitor /// trypsin inhibitor subtype A /// trypsin inhibitor subtype B-1e+1At5g58070TIL (TEMPERATURE-INDUCED LIPOCALIN)O.I.C.G.H.G.
225.1100.00.0GmaAffx.51721.1.A1_atBU549717--2e-2At1g12020unknown proteinO.I.C.G.H.G.
212.3100.018.9GmaAffx.68432.1.S1_atBI426680--9e+0At5g38790unknown proteinO.I.C.G.H.G.
208.6100.04.5GmaAffx.56750.1.S1_atCD395876--4e+0At5g20090unknown proteinO.I.C.G.H.G.
206.3100.00.3GmaAffx.74933.1.S1_atCA935084--6e-2At1g01300aspartyl protease family proteinO.I.C.G.H.G.
198.9100.03.1Gma.9831.1.S1_atCA934968--6e-11At2g34190xanthine/uracil permease family proteinO.I.C.G.H.G.
197.5100.00.9Gma.15403.1.S1_atBG653491--2e+0At1g16840unknown proteinO.I.C.G.H.G.
195.2100.00.1Gma.7583.1.S1_atBU548804--7e+0Atcg00770-O.I.C.G.H.G.
194.8100.01.1GmaAffx.32629.1.S1_atCA784365--1e+1At5g40190calmodulin-binding proteinO.I.C.G.H.G.
194.6100.08.7Gma.8708.1.S1_atBU764015--3e+0At4g31030unknown proteinO.I.C.G.H.G.
194.2100.075.6Gma.8468.1.S1_atAF244890.1receptor-like protein kinase 3-2e-49At5g65700BAM1 (BARELY ANY MERISTEM 1)O.I.C.G.H.G.
191.9100.00.6GmaAffx.50999.1.S1_atAW509187--5e+0At5g54970unknown proteinO.I.C.G.H.G.
190.1100.06.7GmaAffx.11220.1.A1_atCD415475--7e-1At1g36640unknown proteinO.I.C.G.H.G.
189.0100.050.5GmaAffx.66131.1.A1_atAI960551--2e+0At2g28090heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
188.8100.00.6GmaAffx.70662.1.S1_atAW351324--1e+1At5g58784dehydrodolichyl diphosphate synthaseO.I.C.G.H.G.
188.2100.0267.3Gma.17364.1.S1_atCA80307824 kDa oleosin isoform-6e-1At5g64850unknown proteinO.I.C.G.H.G.
185.8100.00.2GmaAffx.16404.1.S1_atAW311529--9e-1At4g21030Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
182.4100.07.3GmaAffx.58559.1.A1_atBE823100--2e-1At4g15770RNA binding / protein bindingO.I.C.G.H.G.
181.8100.00.6GmaAffx.70109.1.S1_atBG551557--3e-20At3g26120TEL1 (TERMINAL EAR1-LIKE 1)O.I.C.G.H.G.
179.3100.06.0GmaAffx.82513.1.S1_atBM092010--2e+0At5g06060tropinone reductase, putative / tropine dehydrogenase, putativeO.I.C.G.H.G.
178.1100.029.5GmaAffx.52052.1.S1_atCA802930--8e+0At3g56000ATCSLA14O.I.C.G.H.G.
174.8100.03.4GmaAffx.84075.1.A1_atCD400437--7e-1At5g35470unknown proteinO.I.C.G.H.G.
168.8100.0186.0Gma.9.1.S1_atAF004807.1dehydrin-1e-7At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.C.G.H.G.
166.6100.05.8GmaAffx.310.1.S1_atAW458428--2e-1At2g25570bindingO.I.C.G.H.G.
165.3100.00.1Gma.17039.1.S1_atBE058128--9e+0At5g0480040S ribosomal protein S17 (RPS17D)O.I.C.G.H.G.
164.1100.00.0Gma.3918.1.S1_atAW349578--9e-1At3g59840unknown proteinO.I.C.G.H.G.
163.7100.00.9GmaAffx.1500.1.S1_atBM523705--8e-1At5g03660unknown proteinO.I.C.G.H.G.
160.5100.054.9GmaAffx.74827.1.S1_atCA802422--2e+0At1g10250-O.I.C.G.H.G.
160.4100.00.2GmaAffx.40911.1.S1_atBU550810--1e-4At5g48500unknown proteinO.I.C.G.H.G.
159.4100.03.3GmaAffx.50026.1.S1_atBG551350--2e+0At3g01570glycine-rich protein / oleosinO.I.C.G.H.G.
159.3100.05.5Gma.16122.1.S1_atCD413696--4e-14At1g02800ATCEL2O.I.C.G.H.G.
158.9100.01.0GmaAffx.84169.1.A1_atCD418367--3e+0At5g05950MEE60 (maternal effect embryo arrest 60)O.I.C.G.H.G.
158.4100.029.6Gma.1832.1.S1_atAW472208--7e-1At1g47450unknown proteinO.I.C.G.H.G.
157.3100.00.0GmaAffx.50615.1.S1_atBE023058--3e+0At4g16080unknown proteinO.I.C.G.H.G.
153.4100.00.5Gma.12829.1.A1_atBE823760--3e+0At3g25855unknown proteinO.I.C.G.H.G.
151.8100.00.0GmaAffx.20325.1.A1_atCD394207--3e+0At3g50960PLP3a (Phosducin-like protein 3 homolog)O.I.C.G.H.G.
150.6100.018.9GmaAffx.81459.1.S1_atBF596892--8e-7At5g6751060S ribosomal protein L26 (RPL26B)O.I.C.G.H.G.
149.1100.00.0HgAffx.5866.1.S1_atCB826345--5e+0At5g25540CID6 (CTC-Interacting Domain 6)O.I.C.G.H.G.
146.3100.033.6Gma.17525.1.S1_atBG839191--0At5g56000heat shock protein 81-4 (HSP81-4)O.I.C.G.H.G.
143.6100.02.5Gma.14966.1.A1_atCD416359--3e-6At4g00430PIP1O.I.C.G.H.G.
143.2100.00.0GmaAffx.50685.1.A1_x_atBI972002--1e+1At5g41910RNA polymerase II mediator complex protein-relatedO.I.C.G.H.G.
141.3100.03.6GmaAffx.61427.1.A1_atCD399540--3e+0At5g13180ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83)O.I.C.G.H.G.
140.4100.06.8Gma.1603.1.S1_atBI943666--8e-3At3g63052unknown proteinO.I.C.G.H.G.
140.3100.010.0GmaAffx.22344.2.A1_atCD408267--2e-1At4g14430IBR10 (INDOLE-3-BUTYRIC ACID RESPONSE 10)O.I.C.G.H.G.
137.9100.00.0PsAffx.C74000027_atPsAffx.C74000027--7e+0At5g20450-O.I.C.G.H.G.
135.4100.00.0GmaAffx.22220.1.A1_atBU550920--2e-1At5g18310unknown proteinO.I.C.G.H.G.
134.6100.02.8Gma.15582.1.S1_atCD403765--1e+0At1g53380unknown proteinO.I.C.G.H.G.
132.9100.08.2Gma.4944.1.A1_atBI969954--7e-1At4g12990unknown proteinO.I.C.G.H.G.
132.8100.00.1GmaAffx.35547.2.S1_atBE802109--2e+0At5g62950catalytic/ nucleotide bindingO.I.C.G.H.G.
130.3100.00.0PsAffx.C164000039_atPsAffx.C164000039--1e+0At2g0999040S ribosomal protein S16 (RPS16A)O.I.C.G.H.G.
130.1100.01.3Gma.9548.2.A1_atCD395161--2e-1At1g66230MYB20 (myb domain protein 20)O.I.C.G.H.G.
129.9100.00.4GmaAffx.69539.1.S1_atBQ473282--2e+0At2g25190unknown proteinO.I.C.G.H.G.
128.5100.00.0PsAffx.C19000053_atPsAffx.C19000053--6e+0At4g38410dehydrin, putativeO.I.C.G.H.G.
127.1100.07.1GmaAffx.10143.3.S1_atBE806991--1e-7At5g26850-O.I.C.G.H.G.
125.9100.010.8Gma.1605.1.S1_x_atBI425139--2e-162At1g48900signal recognition particle 54 kDa protein 3 / SRP54 (SRP-54C)O.I.C.G.H.G.
124.7100.00.0HgAffx.14245.1.S1_atCB375564--4e+0At3g15040unknown proteinO.I.C.G.H.G.
124.6100.01.7GmaAffx.28218.1.S1_atBM307460--4e-1At5g25000unknown proteinO.I.C.G.H.G.
124.3100.011.5Gma.8528.1.S1_atAF116755.1seed maturation protein PM26-2e+0At3g49115unknown proteinO.I.C.G.H.G.
123.6100.00.1Gma.11324.2.S1_a_atCD397701--1e-14At3g16240DELTA-TIPO.I.C.G.H.G.
122.1100.00.1GmaAffx.1873.1.A1_atBU550747--1e+0At4g33690unknown proteinO.I.C.G.H.G.
121.6100.00.7GmaAffx.42713.1.S1_atBU764189--8e+0At5g06250transcription factorO.I.C.G.H.G.
120.7100.06.7GmaAffx.24792.1.S1_atCA819334--3e-2At5g45830DOG1 (DELAY OF GERMINATION 1)O.I.C.G.H.G.
120.2100.00.8GmaAffx.50615.1.A1_atBI967648--3e+0At4g16080unknown proteinO.I.C.G.H.G.
118.9100.00.0PsAffx.C46000052_atPsAffx.C46000052--2e+0At4g14580CIPK4 (CBL-interacting protein kinase 4)O.I.C.G.H.G.
118.2100.04.3Gma.12639.1.A1_atCD393419--1e+1At5g58490cinnamoyl-CoA reductase familyO.I.C.G.H.G.
116.7100.00.3GmaAffx.45755.1.S1_atBI470908--2e+0At1g04520PDLP2 (PLASMODESMATA-LOCATED PROTEIN 2)O.I.C.G.H.G.
115.6100.00.7GmaAffx.65471.1.S1_atBU925937--4e-1At2g18160ATBZIP2 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 2)O.I.C.G.H.G.
115.4100.059.9Gma.2729.1.S1_atAW396742--5e-60At1g22920CSN5A (COP9 SIGNALOSOME 5A)O.I.C.G.H.G.
115.2100.00.2GmaAffx.79574.1.A1_atCD414028--3e+0At3g27809unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage