Microarray experiments to specifically-expressed genes

GSM ID GSM195230
Assay name 5d-seed
GSE experiment GSE7951: Genome-wide gene expression profiling of rice stigma

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
260.3100.04.4Os11g02227009639.m01096--2e+0At2g38790unknown proteinO.I.C.G.H.G.
239.5100.020.5Os03g0639400AK110764.1-Plant invertase/pectin methylesterase inhibitordomain containing protein4e-1At1g09360invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
221.9100.05.6Os05g0356700AK071031.1-Protein of unknown function DUF231 domaincontaining protein5e-2At3g06080unknown proteinO.I.C.G.H.G.
213.7100.013.7Os12g04651009640.m02687-Hypothetical protein1e+0At3g62290ATARFA1E (ADP-ribosylation factor A1E)O.I.C.G.H.G.
210.6100.028.4Os04g03486009632.m02653-Response regulator receiver domain containingprotein2e+0At4g17998unknown proteinO.I.C.G.H.G.
209.0100.06.9Os11g06787009639.m04218--2e+0At3g56440AtATG18dO.I.C.G.H.G.
191.7100.011.3Os07g0624600AK109902.1-Trehalose-6-phosphate phosphatase8e-4At5g10100trehalose-6-phosphate phosphatase, putativeO.I.C.G.H.G.
174.0100.038.9Os10g0463200AK108201.1-Lipolytic enzyme, G-D-S-L family protein1e-5At4g28780GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
172.4100.04.3Os01g0788800AF317882.1-Homeobox domain containing protein5e+0At4g25530FWAO.I.C.G.H.G.
158.3100.023.7Os12g02431009640.m01351-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein9e-1At3g42310unknown proteinO.I.C.G.H.G.
152.9100.02.0Os12g01304009639.m00296--2e+0At4g37610BT5 (BTB AND TAZ DOMAIN PROTEIN 5)O.I.C.G.H.G.
151.1100.061.7Os03g0369100AK111061.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At1g12665-O.I.C.G.H.G.
142.7100.012.6Os05g0491400AK107986.1-LRR protein5e-1At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.C.G.H.G.
138.3100.014.9Os07g0106900AK108101.1-Plant disease resistance response protein familyprotein4e-1At4g05070unknown proteinO.I.C.G.H.G.
127.6100.020.7Os04g05871009632.m04828-Pectinesterase inhibitor domain containing protein5e+0At5g06330hairpin-responsive protein, putative (HIN1)O.I.C.G.H.G.
124.7100.02.9Os12g0427600CA759095-P69F protein9e-1At5g66190FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)O.I.C.G.H.G.
122.9100.017.0Os08g01429009636.m00400-Conserved hypothetical protein1e+0At2g34700pollen Ole e 1 allergen and extensin family proteinO.I.C.G.H.G.
105.7100.01.1Os01g06510009629.m04423-Lipolytic enzyme, G-D-S-L family protein4e-2At5g03980GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
98.8100.023.4Os11g0185100AK107866.1-Hypothetical protein4e+0At5g59040COPT3O.I.C.G.H.G.
95.2100.01.9Os06g0285200AY062183.1-Leafy cotyledon 1-like L1L protein6e-10At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)O.I.C.G.H.G.
89.2100.02.5Os12g02237009640.m01170-Hypothetical protein2e+0At5g39630vesicle transport v-SNARE family proteinO.I.C.G.H.G.
86.3100.013.0Os06g0115000AK108096.1-Conserved hypothetical protein6e-1At3g10220tubulin folding cofactor BO.I.C.G.H.G.
86.0100.00.0Os08g01416009636.m00389--4e+0At3g06750hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
79.099.915.5Os05g0156900CA762976-Pyrophosphate-energized vacuolar membrane protonpump (EC 3.6.1.1) (Pyrophosphate-energized inorganicpyrophosphatase) (H+PPase)3e-1At2g47870glutaredoxin family proteinO.I.C.G.H.G.
78.899.91.8Os02g06015009630.m03745-Cytochrome P450 family protein8e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.C.G.H.G.
75.599.99.1Os04g0497300AF257779.1-Protein of unknown function DUF1138 family protein3e-1At1g13330-O.I.C.G.H.G.
75.299.99.4Os01g05178009629.m03124-Protein of unknown function DUF597 family protein2e-5At1g32700zinc-binding family proteinO.I.C.G.H.G.
74.199.94.1Os07g0196300AK101511.1-Cyclin-like F-box domain containing protein3e+0At5g23820MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.C.G.H.G.
71.599.936.3Os12g0621600AK107596.1-Hypothetical protein1e+0At5g55507hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
69.299.99.4Os06g0613000CR285725-Conserved hypothetical protein3e-1At3g50250unknown proteinO.I.C.G.H.G.
64.099.91.7Os09g0514500AB097944.1-Hypothetical protein2e-1At1g36940unknown proteinO.I.C.G.H.G.
60.499.910.8Os03g0742300AK108126.1-Response regulator receiver domain containingprotein1e+0At1g22840CYTC-1 (CYTOCHROME C-1)O.I.C.G.H.G.
60.099.91.1Os01g0932700AK105157.1-Gamma thionin family protein7e+0At3g55770LIM domain-containing proteinO.I.C.G.H.G.
58.299.915.6Os08g0521600AK108208.1-Pathogenesis-related transcriptional factor andERF domain containing protein1e-1At3g50550unknown proteinO.I.C.G.H.G.
58.199.90.5Os12g0438100AK108104.1-Hypothetical protein2e-2At3g07220transcriptional activator, putativeO.I.C.G.H.G.
57.799.910.6Os06g0137100CA767165-Kinesin, motor region domain containing protein5e+0At3g01440oxygen evolving enhancer 3 (PsbQ) family proteinO.I.C.G.H.G.
55.899.91.3Os11g02213009639.m01086-AUX/IAA protein family protein2e+0At4g33640unknown proteinO.I.C.G.H.G.
55.899.91.0Os04g0429300AK107268.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein2e-1At4g36900RAP2.10 (related to AP2 10)O.I.C.G.H.G.
55.099.940.1Os01g0917100AK107234.1-Conserved hypothetical protein6e-1At4g05070unknown proteinO.I.C.G.H.G.
54.599.96.3Os04g03808009632.m02963-Conserved hypothetical protein1e+0At3g17600IAA31 (INDOLE-3-ACETIC ACID INDUCIBLE 31)O.I.C.G.H.G.
54.399.920.9Os12g0488800AK064347.1-RNA polymerase II, RPB4 domain containing protein7e-1At4g21720unknown proteinO.I.C.G.H.G.
54.099.91.7Os05g0169300AK071481.1-Alliinase EGF-like domain containing protein9e-7At1g70560TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1)O.I.C.G.H.G.
52.999.91.4Os03g0283900AK105569.1--6e-2At1g07870protein kinase family proteinO.I.C.G.H.G.
52.899.99.7Os05g0486300AK073521.1-NOT2/NOT3/NOT5 family protein2e+0At5g59710VIP2 (VIRE2 INTERACTING PROTEIN2)O.I.C.G.H.G.
52.899.96.3Os05g0556800AK109887.1-Protein of unknown function DUF250 domaincontaining protein7e-1At1g07890APX1 (ascorbate peroxidase 1)O.I.C.G.H.G.
51.799.925.7Os06g0229800AF419099.1-Starch synthase isoform zSTSII-1 (EC 2.4.1.21)(Fragment)7e-9At3g01180AtSS2 (starch synthase 2)O.I.C.G.H.G.
51.599.92.7Os12g0168800AK068306.1-AG-motif binding protein-22e-1At3g13227serine-rich protein-relatedO.I.C.G.H.G.
51.199.92.7Os11g0621300BQ906423-Protein of unknown function DUF1399 family protein3e+0At1g6743060S ribosomal protein L17 (RPL17B)O.I.C.G.H.G.
48.499.96.9Os03g0284700AK069841.1-Hypothetical protein2e+0At5g35490unknown proteinO.I.C.G.H.G.
47.799.929.8Os01g0374000BI803090-Glutathione transferase (EC 2.5.1.18)2e-3At1g02940GSTF5 (GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5)O.I.C.G.H.G.
46.799.90.8Os05g0417700BI796216-Hypothetical protein6e-2At1g67670unknown proteinO.I.C.G.H.G.
45.599.90.3Os02g0644200AK111133.1-Protein of unknown function DUF125 family protein1e+0At3g07195proline-rich family proteinO.I.C.G.H.G.
45.399.91.7Os04g02031009632.m01138-Protein of unknown function DUF239 domaincontaining protein4e-1At3g27420unknown proteinO.I.C.G.H.G.
45.199.92.0Os07g0249800AK110647.1-IAA-amino acid hydrolase 1 (EC 3.5.1.-)2e-10At5g56650ILL1O.I.C.G.H.G.
43.899.9100.1Os07g0616800AK100306.1-Sucrose synthase 3 (EC 2.4.1.13) (Sucrose-UDPglucosyltransferase 3)3e-29At5g20830SUS1 (SUCROSE SYNTHASE 1)O.I.C.G.H.G.
41.599.92.1Os06g0156700AK120456.1-Lipolytic enzyme, G-D-S-L family protein6e-1At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.C.G.H.G.
41.499.97.7Os03g0694500AK100981.1-Permease 14e+0At3g19690pathogenesis-related protein, putativeO.I.C.G.H.G.
39.499.91.4Os02g0170300AK109522.1-MADS box protein ZMM174e-5At5g51870AGL71 (AGAMOUS-LIKE 71)O.I.C.G.H.G.
39.099.939.0Os03g0654700AK107417.1-RmlC-like cupin family protein8e-1At3g48490unknown proteinO.I.C.G.H.G.
38.599.82.8Os02g0163300AK064737.1-Conserved hypothetical protein2e+0At3g52550-O.I.C.G.H.G.
36.099.831.3Os02g0100100AK071514.1-Protein disulphide isomerase family protein2e-2At3g54960ATPDIL1-3 (PDI-LIKE 1-3)O.I.C.G.H.G.
35.899.85.6Os02g0487300AK107615.1-Conserved hypothetical protein7e-1At4g01590unknown proteinO.I.C.G.H.G.
35.199.80.5Os01g0241400AK107708.1-Glutaredoxin domain containing protein1e+0At1g54215proline-rich family proteinO.I.C.G.H.G.
35.199.80.5Os07g0271500AK109558.1-Chalcone synthase1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.C.G.H.G.
34.899.80.1Os09g0558800BI801984-Zn-finger, C2H2 type domain containing protein2e+0At5g04390zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
34.399.816.1Os03g0687700AK064673.1-Ribosome-inactivating protein family protein9e+0At5g17350unknown proteinO.I.C.G.H.G.
34.399.81.3Os08g0469500AK109599.1-Hypothetical protein7e-1At1g10780F-box family proteinO.I.C.G.H.G.
32.199.72.8Os07g0530400AK107269.1-Hypothetical protein3e+0At3g28590unknown proteinO.I.C.G.H.G.
31.899.71.9Os01g0859300AK070998.1-ABA response element binding factor2e-7At2g36270ABI5 (ABA INSENSITIVE 5)O.I.C.G.H.G.
31.099.70.3Os05g05593009633.m04538-Conserved hypothetical protein7e-2At5g26720unknown proteinO.I.C.G.H.G.
30.899.71.5Os01g0695900D88620.1-OSMYB42e-10At3g13540ATMYB5 (MYB DOMAIN PROTEIN 5)O.I.C.G.H.G.
30.899.70.4Os04g0127800AK105313.1-Conserved hypothetical protein4e-1At1g02405proline-rich family proteinO.I.C.G.H.G.
30.599.712.8Os09g0548300CR287093-Multi antimicrobial extrusion protein MatE familyprotein1e+0At5g23903unknown proteinO.I.C.G.H.G.
30.299.763.2Os03g0758100AK063766.1-Alpha-1,4 glucan phosphorylase, L-1 isozyme,chloroplast precursor (EC 2.4.1.1) (Starch phosphorylaseL-1)3e-51At3g29320glucan phosphorylase, putativeO.I.C.G.H.G.
29.699.795.6Os01g0633100AY028314.1-ADP-glucose pyrophosphorylase large subunit(Fragment)1e-3At2g21590APL4O.I.C.G.H.G.
29.699.741.9Os05g0513900AK100825.1-Peptidase S33, proline iminopeptidase 1 familyprotein1e-14At2g14260PIPO.I.C.G.H.G.
28.199.60.5Os09g03145009637.m01163-RNA-binding region RNP-1 (RNA recognition motif)domain containing protein5e-1At5g44570unknown proteinO.I.C.G.H.G.
27.499.60.1Os01g0382200AK107406.1-The start codon is not identified.3e+0At5g05230ubiquitin-protein ligaseO.I.C.G.H.G.
27.399.65.9Os04g0505300BI801070-Conserved hypothetical protein4e-1At5g15725unknown proteinO.I.C.G.H.G.
26.899.64.8Os01g0915200AK121863.1-Cystatin1e+1At1g70895CLE17 (CLAVATA3/ESR-RELATED 17)O.I.C.G.H.G.
26.499.590.1Os02g0202400AK107368.1-Brittle-1 protein, chloroplast precursor8e-1At5g27690heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
26.499.534.7Os05g0415400AK107330.1-No apical meristem (NAM) protein domain containingprotein1e-2At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)O.I.C.G.H.G.
26.299.523.7Os02g0725900AJ300218.1-Transcription factor CBF/NF-Y/archaeal histonedomain containing protein2e+0At4g18970GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
25.799.537.0Os05g0366900AK107765.1-Conserved hypothetical protein2e+0At3g48700ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13)O.I.C.G.H.G.
25.799.526.1Os02g0252400AB028131.1-Zn-finger, Dof type domain containing protein5e-5At1g47655Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
25.399.50.4Os08g02672009636.m01673--6e-2At2g33600cinnamoyl-CoA reductase familyO.I.C.G.H.G.
25.399.50.1Os08g01421009636.m00393--1e+0At1g78172unknown proteinO.I.C.G.H.G.
25.199.510.8Os04g0538400AK108230.1-Nodulin 21 (N-21)9e-3At3g43660nodulin, putativeO.I.C.G.H.G.
24.899.5106.4Os03g08085009631.m05846-Plant lipid transfer protein/Par allergen familyprotein1e+0At5g47080CKB1O.I.C.G.H.G.
24.899.514.5Os08g0520900CR282303-Isoamylase (Fragment)1e-62At2g39930ISA1 (ISOAMYLASE 1)O.I.C.G.H.G.
24.499.42.7Os02g0786900AK105575.1-PR-1a pathogenesis related protein (Hv-1a)precursor8e-1At2g04025unknown proteinO.I.C.G.H.G.
24.399.424.4Os02g0214500AK107283.1-No apical meristem (NAM) protein domain containingprotein6e-4At2g18060VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1)O.I.C.G.H.G.
24.199.40.7Os07g0165100CF320837-C2 domain containing protein1e-1At5g17980C2 domain-containing proteinO.I.C.G.H.G.
23.999.45.3Os03g0689300AK100996.1-Plasma membrane H+ ATPase (EC 3.6.3.6) (H-ATPase)3e-82At5g62670AHA11 (Arabidopsis H(+)-ATPase 11)O.I.C.G.H.G.
23.599.44.2Os01g0596700AK107371.1-Conserved hypothetical protein2e-1At4g36530hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
23.399.417.4Os06g0326400CB667878-Phosphofructokinase family protein6e-49At1g76550pyrophosphate--fructose-6-phosphate 1-phosphotransferase alpha subunit, putative / pyrophosphate-dependent 6-phosphofructose-1-kinase, putativeO.I.C.G.H.G.
23.299.30.6Os06g0589700AK064233.1-Polyadenylate-binding protein/Hyperplastic discprotein domain containing protein7e-1At4g34110PAB2 (POLY(A) BINDING 2)O.I.C.G.H.G.
22.999.34.1Os02g0456100CA760013-11-S plant seed storage protein family protein1e+0At1g68450VQ motif-containing proteinO.I.C.G.H.G.
22.799.30.8Os05g0551500AK108248.1-Conserved hypothetical protein6e-2At1g49820ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)O.I.C.G.H.G.
22.699.357.7Os11g0512000AK107369.1--1e-2At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.C.G.H.G.



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