Microarray experiments to specifically-expressed genes

GSM ID GSM195229
Assay name Endosperm
GSE experiment GSE7951: Genome-wide gene expression profiling of rice stigma

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
209.3100.055.9Os08g0521600AK108208.1-Pathogenesis-related transcriptional factor andERF domain containing protein1e-1At3g50550unknown proteinO.I.C.G.H.G.
144.5100.03.3Os02g06015009630.m03745-Cytochrome P450 family protein8e-1At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.C.G.H.G.
144.1100.037.5Os07g0668600AK108315.1-Hypothetical protein6e-1At5g65900DEAD/DEAH box helicase, putativeO.I.C.G.H.G.
123.5100.039.0Os08g0290700AK071201.1-O-methyltransferase, family 2 domain containingprotein3e-3At2g40570initiator tRNA phosphoribosyl transferase family proteinO.I.C.G.H.G.
104.1100.014.4Os08g01429009636.m00400-Conserved hypothetical protein1e+0At2g34700pollen Ole e 1 allergen and extensin family proteinO.I.C.G.H.G.
92.8100.016.8Os02g0456100CA760013-11-S plant seed storage protein family protein1e+0At1g68450VQ motif-containing proteinO.I.C.G.H.G.
88.5100.09.9Os02g0296400BI800847-Cell differentiation protein rcd14e+0At1g80110ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11)O.I.C.G.H.G.
87.6100.012.3Os02g0463500AK107401.1-Serine carboxypeptidase I precursor (EC 3.4.16.5)(Carboxypeptidase C)1e-2At5g39300ATEXPA25 (ARABIDOPSIS THALIANA EXPANSIN A25)O.I.C.G.H.G.
86.3100.08.9Os08g0161500AK060630.1-Esterase/lipase/thioesterase domain containingprotein3e-7At1g32190-O.I.C.G.H.G.
86.3100.04.8Os01g03469009629.m02364-Histone-fold domain containing protein7e-1At2g27220BLH5 (BELL1-like homeodomain 5)O.I.C.G.H.G.
82.9100.01.1Os07g0271500AK109558.1-Chalcone synthase1e-5At5g13930TT4 (TRANSPARENT TESTA 4)O.I.C.G.H.G.
81.499.973.6Os02g0725900AJ300218.1-Transcription factor CBF/NF-Y/archaeal histonedomain containing protein2e+0At4g18970GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
77.999.918.5Os11g0185100AK107866.1-Hypothetical protein4e+0At5g59040COPT3O.I.C.G.H.G.
72.599.931.9Os10g0430900AK121718.1-Protein kinase domain containing protein2e-28At1g08720EDR1 (ENHANCED DISEASE RESISTANCE 1)O.I.C.G.H.G.
71.299.99.5Os07g0182000AB053472.1-Transcriptional activator protein6e-2At1g09665Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.C.G.H.G.
69.499.978.3Os03g0168500CA765372-Thioredoxin-related domain containing protein2e+1At5g06510NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10)O.I.C.G.H.G.
68.999.92.3Os05g0551500AK108248.1-Conserved hypothetical protein6e-2At1g49820ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE)O.I.C.G.H.G.
68.799.934.9Os12g0621600AK107596.1-Hypothetical protein1e+0At5g55507hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
68.599.941.9Os12g0578200AK105512.1-Chorismate mutase, chloroplast precursor (EC5.4.99.5) (CM-1)7e-1At4g11870unknown proteinO.I.C.G.H.G.
66.899.921.4Os03g0712800AK063913.1-Glutamine synthetase root isozyme 2 (EC 6.3.1.2)(Glutamate--ammonia ligase)4e-18At5g37600ATGSR1O.I.C.G.H.G.
63.899.92.0Os05g0169300AK071481.1-Alliinase EGF-like domain containing protein9e-7At1g70560TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1)O.I.C.G.H.G.
63.599.90.6Os04g0276200AK073383.1-ARM repeat fold domain containing protein9e-1At1g02930ATGSTF6 (GLUTATHIONE S-TRANSFERASE)O.I.C.G.H.G.
59.999.946.7Os01g0928000AK102594.1-Transcription factor ICE1 (Inducer of CBFexpression 1) (Basic helix- loop-helix protein 116)(bHLH116) (AtbHLH116)2e-16At3g26744ICE1 (INDUCER OF CBF EXPRESSION 1)O.I.C.G.H.G.
59.299.932.2Os01g0778900AK107825.1-Conserved hypothetical protein4e+0At1g43650integral membrane family protein / nodulin MtN21-relatedO.I.C.G.H.G.
56.899.956.9Os03g0654700AK107417.1-RmlC-like cupin family protein8e-1At3g48490unknown proteinO.I.C.G.H.G.
55.799.916.7Os07g0480900AK063422.1-Cysteine protease (Fragment)8e-7At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.C.G.H.G.
54.799.925.3Os10g0550100AK106583.1-Conserved hypothetical protein1e-2At4g00450CRP (CRYPTIC PRECOCIOUS)O.I.C.G.H.G.
54.199.98.2Os06g0115000AK108096.1-Conserved hypothetical protein6e-1At3g10220tubulin folding cofactor BO.I.C.G.H.G.
53.999.93.7Os05g0574900AK107256.1-GRAS transcription factor domain containingprotein6e-2At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinO.I.C.G.H.G.
53.899.920.7Os12g0488800AK064347.1-RNA polymerase II, RPB4 domain containing protein7e-1At4g21720unknown proteinO.I.C.G.H.G.
53.399.920.8Os04g0390800AK108276.1-Short-chain dehydrogenase/reductase SDR familyprotein5e-8At3g47350short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
53.199.90.3Os01g0382200AK107406.1-The start codon is not identified.3e+0At5g05230ubiquitin-protein ligaseO.I.C.G.H.G.
52.499.913.6Os05g03048009633.m02127-Histone-fold domain containing protein5e-1At3g46130MYB111 (MYB DOMAIN PROTEIN 111)O.I.C.G.H.G.
51.599.98.0Os01g0228500AK119627.1-Harpin-induced 1 domain containing protein7e-1At2g23310ATRER1C1O.I.C.G.H.G.
50.099.933.5Os11g0533400AK063652.1-Hypothetical protein2e+0At2g18050HIS1-3 (HISTONE H1-3)O.I.C.G.H.G.
49.199.919.7Os07g0555000AK105566.1-Conserved hypothetical protein7e-1At3g21730dihydroneopterin aldolase family proteinO.I.C.G.H.G.
49.199.91.9Os10g0446400AK108348.1-Conserved hypothetical protein2e+0At5g44005unknown proteinO.I.C.G.H.G.
48.999.910.6Os04g0505300BI801070-Conserved hypothetical protein4e-1At5g15725unknown proteinO.I.C.G.H.G.
48.499.913.0Os11g0147600AK111127.1-Hypothetical protein3e-1At2g30560glycine-rich proteinO.I.C.G.H.G.
47.899.910.6Os03g0689300AK100996.1-Plasma membrane H+ ATPase (EC 3.6.3.6) (H-ATPase)3e-82At5g62670AHA11 (Arabidopsis H(+)-ATPase 11)O.I.C.G.H.G.
47.299.948.1Os02g0252400AB028131.1-Zn-finger, Dof type domain containing protein5e-5At1g47655Dof-type zinc finger domain-containing proteinO.I.C.G.H.G.
46.199.91.2Os02g0583900AK070354.1-Conserved hypothetical protein6e+0Atcg00330-O.I.C.G.H.G.
45.799.9142.1Os07g0615500BI802838-Protein of unknown function DUF581 family protein1e-1At1g43900protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
45.799.931.5Os06g0221300AK108233.1-Dehydration stress-induced protein3e-2At3g10040transcription factorO.I.C.G.H.G.
45.099.96.4Os06g0527800AK108261.1-Conserved hypothetical protein3e-2At5g53160unknown proteinO.I.C.G.H.G.
44.799.9113.9Os11g0512000AK107369.1--1e-2At3g51880HMGB1 (HIGH MOBILITY GROUP B 1)O.I.C.G.H.G.
43.899.912.3Os03g0826500AB022602.1-Anthranilate synthase alpha 1 subunit5e-9At5g05730ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)O.I.C.G.H.G.
43.799.96.2Os04g0422600AK099964.1-Protein of unknown function DUF6 domain containingprotein1e-2At5g40230nodulin-relatedO.I.C.G.H.G.
42.899.912.1Os09g0497100AK070870.1-Pumilio2e-3At4g25880APUM6 (Arabidopsis Pumilio 6)O.I.C.G.H.G.
42.199.92.1Os04g0527900AK108116.1--1e-7At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)O.I.C.G.H.G.
42.099.919.1Os06g0208700AK065860.1-Putative tyrosine phosphatase family protein8e-9At4g03960tyrosine specific protein phosphatase family proteinO.I.C.G.H.G.
41.799.97.8Os03g0694500AK100981.1-Permease 14e+0At3g19690pathogenesis-related protein, putativeO.I.C.G.H.G.
41.399.941.4Os02g0214500AK107283.1-No apical meristem (NAM) protein domain containingprotein6e-4At2g18060VND1 (VASCULAR RELATED NAC-DOMAIN PROTEIN 1)O.I.C.G.H.G.
41.299.930.1Os01g0917100AK107234.1-Conserved hypothetical protein6e-1At4g05070unknown proteinO.I.C.G.H.G.
40.499.96.7Os01g0977300AK110631.1-MYB-related protein3e-2At4g28300hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
39.299.9126.7Os01g0633100AY028314.1-ADP-glucose pyrophosphorylase large subunit(Fragment)1e-3At2g21590APL4O.I.C.G.H.G.
39.099.93.3Os03g0639400AK110764.1-Plant invertase/pectin methylesterase inhibitordomain containing protein4e-1At1g09360invertase/pectin methylesterase inhibitor family proteinO.I.C.G.H.G.
39.099.91.3Os02g01862009630.m00845--8e-1At3g20130CYP705A22O.I.C.G.H.G.
38.999.82.3Os01g0859300AK070998.1-ABA response element binding factor2e-7At2g36270ABI5 (ABA INSENSITIVE 5)O.I.C.G.H.G.
38.699.81.2Os12g0554100AK069357.1-Protein of unknown function DUF231 domaincontaining protein1e-6At5g06230unknown proteinO.I.C.G.H.G.
37.999.80.7Os01g0580400AY332467.1-Histone-fold domain containing protein3e+0At5g63135unknown proteinO.I.C.G.H.G.
37.599.835.1Os07g0222000AK107870.1--2e+1At5g47290myb family transcription factorO.I.C.G.H.G.
37.599.82.2Os04g0429400AK108728.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e-2At5g67490unknown proteinO.I.C.G.H.G.
37.499.837.5Os06g0283400AK072153.1-Phosphatidylinositol 3- and 4-kinase domaincontaining protein1e-16At2g03890phosphatidylinositol 3- and 4-kinase family proteinO.I.C.G.H.G.
37.399.831.1Os03g0304800AK062656.1-Conserved hypothetical protein2e-2At5g64130-O.I.C.G.H.G.
37.099.83.6Os08g0508700AK072462.1-ETHYLENE-INSENSITIVE3-like 3 protein5e-3At1g73730EIL3 (ETHYLENE-INSENSITIVE3-LIKE3)O.I.C.G.H.G.
35.699.820.8Os08g0520900CR282303-Isoamylase (Fragment)1e-62At2g39930ISA1 (ISOAMYLASE 1)O.I.C.G.H.G.
35.699.80.6Os05g0417700BI796216-Hypothetical protein6e-2At1g67670unknown proteinO.I.C.G.H.G.
35.599.80.8Os11g02213009639.m01086-AUX/IAA protein family protein2e+0At4g33640unknown proteinO.I.C.G.H.G.
35.199.85.2Os07g0691600AK070356.1-Glucose/ribitol dehydrogenase family protein4e-2At3g13110ATSERAT2O.I.C.G.H.G.
34.899.839.4Os02g0508100BI802575-Conserved hypothetical protein4e-4At3g01950unknown proteinO.I.C.G.H.G.
34.799.8198.4Os02g0576400AK107966.1-Conserved hypothetical protein7e+0At4g26400zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
33.999.825.1Os03g0724500AU182100-Conserved hypothetical protein1e+0At3g43950phosphotransferase, alcohol group as acceptorO.I.C.G.H.G.
33.999.88.2Os01g0775300AK102133.1-MATH domain containing protein1e-17At5g52330meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.C.G.H.G.
33.699.852.4Os02g0799000AK099720.1-DNA-binding protein phosphatase 2C2e-4At2g33700protein phosphatase 2C, putative / PP2C, putativeO.I.C.G.H.G.
33.599.8178.2Os01g0898500AK106563.1-Patatin-like protein 2 (Fragment)8e-1At2g26560PLA2A (PHOSPHOLIPASE A 2A)O.I.C.G.H.G.
32.799.82.6Os06g0656700AK110668.1-Hypothetical protein6e+0At5g19860unknown proteinO.I.C.G.H.G.
32.799.81.2Os10g0138300NM_194784.1-Conserved hypothetical protein1e+1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.C.G.H.G.
32.399.85.0Os02g0487300AK107615.1-Conserved hypothetical protein7e-1At4g01590unknown proteinO.I.C.G.H.G.
32.299.718.8Os04g0526600AY166458.1-Alpha-amylase/subtilisin inhibitor (RASI)2e+0At5g35120unknown proteinO.I.C.G.H.G.
32.199.742.0Os03g0289100AK121034.1-OSK3 (OSK5)1e-52At3g01090AKIN10 (Arabidopsis SNF1 kinase homolog 10)O.I.C.G.H.G.
32.099.75.8Os05g0268500AK107270.1-Serine carboxypeptidase II-2 precursor (EC3.4.16.6) (CP-MII.2) (Fragment)9e-7At2g35780scpl26 (serine carboxypeptidase-like 26)O.I.C.G.H.G.
31.899.741.8Os05g0415400AK107330.1-No apical meristem (NAM) protein domain containingprotein1e-2At3g15500ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55)O.I.C.G.H.G.
31.799.7213.1Os07g0219300D11385.1-Prolamin precursor (13 kDa prolamin)5e+0At4g30430TET9 (TETRASPANIN9)O.I.C.G.H.G.
31.799.74.4Os05g0500900AK101932.1-Auxin-responsive-like protein (Auxin-responsiveGH3 homologue)2e-5At5g54510DFL1 (DWARF IN LIGHT 1)O.I.C.G.H.G.
31.599.764.7Os06g0141400CA763225-Early nodulin (ESTs C98096(C0688))3e-1At1g02040zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
31.599.741.1Os06g0507100AA753757-Gliadin/LMW glutenin family protein3e+0At1g66480PMI2 (plastid movement impaired 2)O.I.C.G.H.G.
31.199.74.3Os05g0218100AK108327.1-Conserved hypothetical protein2e+0At2g31945unknown proteinO.I.C.G.H.G.
31.199.71.2Os02g01859009630.m00842-Cytochrome P450 family protein3e-6At3g26830PAD3 (PHYTOALEXIN DEFICIENT 3)O.I.C.G.H.G.
30.899.70.3Os05g0369500AK070770.1-Conserved hypothetical protein4e+0At5g02810PRR7 (PSEUDO-RESPONSE REGULATOR 7)O.I.C.G.H.G.
30.399.7104.7Os10g0463800AK102352.1-Conserved hypothetical protein2e-7At1g07040unknown proteinO.I.C.G.H.G.
30.099.737.6Os05g0329300M23743.1-Prolamin 76e+0At2g40830RHC1AO.I.C.G.H.G.
30.099.70.3Os04g0476600AK105466.1-C2 domain containing protein3e-4At5g50170C2 domain-containing protein / GRAM domain-containing proteinO.I.C.G.H.G.
29.799.795.4Os09g0498500AK121017.1-NAD-binding site containing protein2e-1At4g32280IAA29 (INDOLE-3-ACETIC ACID INDUCIBLE 29)O.I.C.G.H.G.
29.799.77.8Os04g0532800AK107135.1--4e-2At3g46130MYB111 (MYB DOMAIN PROTEIN 111)O.I.C.G.H.G.
29.699.70.4Os02g05481009630.m03271--4e-2At1g67770TEL2 (TERMINAL EAR1-LIKE 2)O.I.C.G.H.G.
29.599.713.8Os03g0336700AK120611.1-PAP/25A core domain containing protein1e-4At3g51620-O.I.C.G.H.G.
29.099.712.1Os09g0548300CR287093-Multi antimicrobial extrusion protein MatE familyprotein1e+0At5g23903unknown proteinO.I.C.G.H.G.
28.799.65.3Os05g0486300AK073521.1-NOT2/NOT3/NOT5 family protein2e+0At5g59710VIP2 (VIRE2 INTERACTING PROTEIN2)O.I.C.G.H.G.
28.699.64.4Os01g0197400AK102992.1-Conserved hypothetical protein1e-1At4g24300peptidaseO.I.C.G.H.G.



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