Microarray experiments to specifically-expressed genes

GSM ID GSM195226
Assay name Root
GSE experiment GSE7951: Genome-wide gene expression profiling of rice stigma

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
204.2100.069.3Os06g0701700AB061313.1-HKT-type transporter (Sodium ion transporter)9e-1At4g04020FIB (FIBRILLIN)O.I.C.G.H.G.
154.4100.034.6Os04g0125700AK073177.1-Legume lectin, beta domain containing protein8e-5At5g59660leucine-rich repeat protein kinase, putativeO.I.C.G.H.G.
96.5100.05.5Os01g0666000AK070670.1-Lipid phosphate phosphatase 2 (EC 3.1.3.-)(AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2)(Prenyl diphosphate phosphatase)5e-8At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)O.I.C.G.H.G.
84.6100.025.7Os06g0584400AK072622.1-Hypothetical protein1e+0At5g19630unknown proteinO.I.C.G.H.G.
81.799.917.6Os02g0185200AK107034.1-Cytochrome P450 family protein9e-1At3g26830PAD3 (PHYTOALEXIN DEFICIENT 3)O.I.C.G.H.G.
76.199.91.7Os03g0812400AK119951.1-Calcium-binding EF-hand domain containing protein4e-4At1g32250calmodulin, putativeO.I.C.G.H.G.
70.699.94.1Os10g05132009638.m03293-NOD26-like membrane integral protein ZmNIP3-12e-5At4g10380NIP5O.I.C.G.H.G.
65.299.932.8Os08g0239300AK059753.1-Endo-1,3;1,4-beta-D-glucanase precursor (EC3.2.1.-)6e-1At4g17310unknown proteinO.I.C.G.H.G.
58.499.93.8Os02g06205009630.m03934-High affinity ammonium transporter3e-19At1g64780ATAMT1O.I.C.G.H.G.
49.499.97.9Os12g0260500AU184051-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g56860GNC (GATA, nitrate-inducible, carbon metabolism-involved)O.I.C.G.H.G.
40.799.90.2Os02g02120009630.m01090--2e+0At4g26055unknown proteinO.I.C.G.H.G.
39.499.95.3Os05g0574100AK106699.1-Lipase, class 3 family protein3e+0At5g33390glycine-rich proteinO.I.C.G.H.G.
39.299.999.8Os02g0184900AK100832.1-Cytochrome P450 family protein5e-2At3g44250CYP71B38O.I.C.G.H.G.
37.799.821.7Os06g0215600AU222916-Oxo-phytodienoic acid reductase(12-oxophytodienoic acid reductase)6e-4At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.C.G.H.G.
37.599.87.9Os05g0280500AK111471.1-Phospholipid/glycerol acyltransferase familyprotein2e-8At2g38110GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)O.I.C.G.H.G.
33.999.837.1Os01g0972200AY302058.1-Zinc transporter 2 precursor (ZRT/IRT-like protein2)7e-4At5g59520ZIP2O.I.C.G.H.G.
33.699.80.4Os11g06631009639.m04095--7e-1At5g01470unknown proteinO.I.C.G.H.G.
33.499.82.1Os06g0323100AK100029.1-S-adenosyl-L-methionine:salicylic acid carboxylmethyltransferase4e-5At5g55250IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1)O.I.C.G.H.G.
32.299.71.9Os10g0558900AK068525.1-2OG-Fe(II) oxygenase domain containing protein2e+0At5g01670aldose reductase, putativeO.I.C.G.H.G.
31.499.722.1Os12g0135800AK061124.1--3e-3At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.C.G.H.G.
31.499.71.8Os06g0599200AU095771-Cytochrome P450 family protein6e+0At5g51720unknown proteinO.I.C.G.H.G.
31.199.712.8Os01g0134900BI805418-(1,4)-beta-xylan endohydrolase, isoenzyme X-II (EC3.2.1.8) (Fragment)4e-3At4g08160glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing proteinO.I.C.G.H.G.
31.099.71.5Os06g0575400AK111890.1-Protein kinase domain containing protein1e-3At1g69790protein kinase, putativeO.I.C.G.H.G.
31.099.71.1Os02g0222100AK110984.1-Cysteine synthase (EC 4.2.99.8)1e+0At3g04940CYSD1 (CYSTEINE SYNTHASE D1)O.I.C.G.H.G.
30.899.70.3Os11g06095009639.m03608-Protein kinase domain containing protein9e-1At4g26940galactosyltransferase family proteinO.I.C.G.H.G.
30.399.72.7Os06g0293500AK110449.1-Hypothetical protein1e+0At4g18205-O.I.C.G.H.G.
28.999.61.5Os06g05423009634.m03314-Heavy metal transport/detoxification proteindomain containing protein3e-2At1g22990heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.C.G.H.G.
27.499.635.4Os12g0203200AK063151.1-Hypothetical protein1e+0At3g24750unknown proteinO.I.C.G.H.G.
27.199.610.4Os09g0322400AK062723.1-Hypothetical protein4e-1At5g09990PROPEP5 (Elicitor peptide 5 precursor)O.I.C.G.H.G.
25.999.59.8Os01g0704100AK109776.1--2e-5At1g12940ATNRT2.5 (nitrate transporter2.5)O.I.C.G.H.G.
24.899.51.8Os03g0149000AK107949.1-Protein of unknown function DUF260 domaincontaining protein6e-6At4g00220JLO (JAGGED LATERAL ORGANS)O.I.C.G.H.G.
24.799.40.6Os10g0122500NM_194664.1-Transferase family protein6e-1At1g71120GLIP6O.I.C.G.H.G.
24.799.40.3Os07g0499500AK108797.1-Peroxidase 7 precursor (EC 1.11.1.7) (Atperox P7)(ATP30)1e-2At1g30870cationic peroxidase, putativeO.I.C.G.H.G.
24.199.42.1Os06g0714300AK107043.1-Auxin responsive SAUR protein family protein1e-1At1g21695hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
23.999.45.4Os04g0186400AF416722.1-Phosphate transporter 65e-22At2g32830PHT5O.I.C.G.H.G.
23.699.42.4Os06g0185200AK109116.1-Hypothetical protein6e-1At3g55460SCL30O.I.C.G.H.G.
23.499.45.8Os09g0129500AK099466.1-Conserved hypothetical protein2e+0At1g67800copine-relatedO.I.C.G.H.G.
23.099.32.2Os04g0410400AK108077.1-Root cap family protein1e+1At5g13200GRAM domain-containing protein / ABA-responsive protein-relatedO.I.C.G.H.G.
22.199.31.4Os03g0375900AK107064.1-Amino acid/polyamine transporter I family protein7e-2At4g25080CHLM (magnesium-protoporphyrin IX methyltransferase)O.I.C.G.H.G.
22.099.320.1Os01g0591300AK101427.1-Cytosolic aldehyde dehydrogenase RF2D4e-6At3g24503ALDH2C4O.I.C.G.H.G.
21.899.28.2Os11g0141400AK070778.1-Calcium-binding EF-hand domain containing protein2e-3At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.C.G.H.G.
21.599.26.0Os08g01087009636.m00070-Conserved hypothetical protein9e-2At3g21260glycolipid transfer protein-relatedO.I.C.G.H.G.
21.499.219.4Os01g0216000AK058429.1-Lipolytic enzyme, G-D-S-L family protein8e-4At4g09840unknown proteinO.I.C.G.H.G.
21.299.241.4Os03g0856000AK071626.1-2OG-Fe(II) oxygenase domain containing protein8e-7At1g066502-oxoglutarate-dependent dioxygenase, putativeO.I.C.G.H.G.
21.299.20.3Os06g0185400AK107760.1-Hypothetical protein4e-1At5g62065lipid bindingO.I.C.G.H.G.
20.899.28.1Os11g0669100AK068628.1-Hypothetical protein5e+0At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.C.G.H.G.
20.899.24.4Os03g0174900CR280190-Transcriptional activator php29e+0At5g12840NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)O.I.C.G.H.G.
20.699.10.5Os07g0584200AK102803.1-NPH3 domain containing protein1e-3At5g46780VQ motif-containing proteinO.I.C.G.H.G.
20.599.161.9Os04g0401700AY324878.1-Potassium transporter 5 (AtPOT5) (AtHAK1) (AtHAK5)1e-1At2g30590WRKY21O.I.C.G.H.G.
20.399.10.3Os08g0398300AK122145.1-ABC transporter domain containing protein2e-6At3g47780ATATH6O.I.C.G.H.G.
20.099.114.2Os01g0371500AK062937.1-Glutathione-S-transferase 19E507e-3At4g02520ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)O.I.C.G.H.G.
20.099.11.0Os04g0674800AK119913.1-Cellulase (Fragment)1e+0At1g02800ATCEL2O.I.C.G.H.G.
19.999.18.9Os03g0809000AK121408.1-Plant disease resistance response protein familyprotein4e-1At4g38700disease resistance-responsive family proteinO.I.C.G.H.G.
19.799.124.3Os11g0134900AK069533.1-Major facilitator superfamily antiporter1e+0At3g43790ZIFL2 (ZINC INDUCED FACILITATOR-like 2)O.I.C.G.H.G.
19.799.12.8Os08g0390700AK062714.1-2-oxoglutarate-dependent oxygenase4e+0At5g01075beta-galactosidaseO.I.C.G.H.G.
19.799.11.0Os11g0111700AK062951.1-Hypothetical protein5e+0At2g19850-O.I.C.G.H.G.
19.199.04.6Os08g0398000AK101910.1-ABC transporter related domain containing protein5e-10At3g47730ATATH1O.I.C.G.H.G.
19.199.03.0Os01g05881009629.m03872--5e-1At2g22800HAT9O.I.C.G.H.G.



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