CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184924

Assay name Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3

GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
445.8 100.0 117.4 At5g43380 834356 TOPP6 encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. O.I. C.G. H.G.
405.6 100.0 124.1 At1g26450 839186 beta-1,3-glucanase-related F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OMFPBVA O.I. C.G. H.G.
327.7 100.0 145.1 At2g41300 818729 strictosidine synthase F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;PMBOA O.I. C.G. H.G.
327.2 100.0 89.7 At3g18670 821398 ankyrin repeat family protein F:protein binding;P:unknown;C:unknown;MOPBFAV O.I. C.G. H.G.
305.8 100.0 51.9 At3g28600 822490 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
299.3 100.0 185.3 At5g02140 831881 thaumatin-like protein, putative F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBOV O.I. C.G. H.G.
271.0 100.0 244.2 At1g73370 843672 SUS6 (SUCROSE SYNTHASE 6) Encodes a protein with sucrose synthase activity (SUS6). O.I. C.G. H.G.
270.1 100.0 123.0 At5g11100 830978 SYTD F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO O.I. C.G. H.G.
252.3 100.0 175.9 At3g58350 825004 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB O.I. C.G. H.G.
238.6 100.0 194.7 At5g48060 834858 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
235.0 100.0 70.4 At1g65910 842903 anac028 (Arabidopsis NAC domain containing protein 28) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POM O.I. C.G. H.G.
232.1 100.0 44.5 At1g11915 837741 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
228.2 100.0 64.7 At5g35670 833540 iqd33 (IQ-domain 33) F:calmodulin binding;P:biological_process unknown;C:unknown;PBMOF O.I. C.G. H.G.
221.3 100.0 78.1 At1g70130 843349 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
220.4 100.0 80.5 At3g03200 821226 anac045 (Arabidopsis NAC domain containing protein 45) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POVMB O.I. C.G. H.G.
218.7 100.0 113.3 At3g17690 821036 ATCNGC19 member of Cyclic nucleotide gated channel family O.I. C.G. H.G.
217.2 100.0 113.8 At1g05100 839324 MAPKKK18 member of MEKK subfamily O.I. C.G. H.G.
216.8 100.0 41.0 At3g26350 822239 - F:unknown;P:unknown;C:chloroplast;MPFOVBA O.I. C.G. H.G.
211.6 100.0 114.2 At2g36650 818237 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV O.I. C.G. H.G.
204.2 100.0 53.6 At5g40630 834062 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV O.I. C.G. H.G.
201.0 100.0 143.0 At3g15800 820823 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PO O.I. C.G. H.G.
193.7 100.0 51.7 At1g64700 842778 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
188.6 100.0 95.2 At2g15310 816020 ATARFB1A (ADP-ribosylation factor B1A) A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor (GI:861205) (Chlamydomonas reinhardtii), other ARFs and ARF-like proteins. O.I. C.G. H.G.
186.4 100.0 103.0 At5g58690 835983 phosphoinositide-specific phospholipase C family protein F:phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity, calcium ion binding;P:signal transduction, intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;MFOP O.I. C.G. H.G.
184.7 100.0 195.9 At1g05760 837084 RTM1 (restricted tev movement 1) Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance O.I. C.G. H.G.
180.4 100.0 234.1 At5g04890 830370 RTM2 (RESTRICTED TEV MOVEMENT 2) Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs). O.I. C.G. H.G.
174.4 100.0 69.1 At4g24250 828526 MLO13 (MILDEW RESISTANCE LOCUS O 13) A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO13 belongs to the clade II, with ATMLO1 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and also in placenta of developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). O.I. C.G. H.G.
172.2 100.0 120.7 At5g56720 835773 malate dehydrogenase, cytosolic, putative F:in 6 functions;P:cellular carbohydrate metabolic process, glycolysis, malate metabolic process, carbohydrate metabolic process, metabolic process;C:membrane;BOMPFA O.I. C.G. H.G.
172.0 100.0 62.0 At2g31940 817752 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
171.6 100.0 122.3 At5g07710 830664 exonuclease family protein F:exonuclease activity, nucleic acid binding;P:biological_process unknown;C:intracellular;BOP O.I. C.G. H.G.
169.2 100.0 87.7 At4g36710 829824 transcription factor F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO O.I. C.G. H.G.
167.7 100.0 88.0 At5g20870 832210 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOB O.I. C.G. H.G.
166.9 100.0 36.2 At1g75590 843894 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
165.9 100.0 262.6 At3g07420 819930 NS2 Encodes an asparaginyl-tRNA synthetase. O.I. C.G. H.G.
162.7 99.9 39.6 At1g54330 841874 ANAC020 (Arabidopsis NAC domain containing protein 20) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
161.9 99.9 101.0 At1g06490 837160 ATGSL07 (glucan synthase-like 7) encodes a gene similar to callose synthase O.I. C.G. H.G.
159.4 99.9 151.4 At1g77700 844106 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:cellular_component unknown;PFMBOV O.I. C.G. H.G.
156.0 99.9 70.7 At3g22400 821808 LOX5 F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:root development;C:chloroplast;PMBFO O.I. C.G. H.G.
155.8 99.9 94.9 At1g61760 842473 harpin-induced protein-related / HIN1-related / harpin-responsive protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
155.5 99.9 48.0 At2g34530 818016 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
154.5 99.9 93.0 At3g10680 820237 heat shock protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVA O.I. C.G. H.G.
154.4 99.9 68.3 At5g67050 836840 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:membrane;OPBFMV O.I. C.G. H.G.
151.5 99.9 117.1 At5g49320 834992 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
149.4 99.9 109.6 At5g62960 836416 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.
145.1 99.9 103.5 At5g03510 831818 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPO O.I. C.G. H.G.
144.9 99.9 43.4 At5g17260 831591 anac086 (Arabidopsis NAC domain containing protein 86) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
138.6 99.9 123.6 At5g37180 833692 SUS5 Encodes a protein with sucrose synthase activity (SUS5). O.I. C.G. H.G.
138.3 99.9 104.6 At5g67460 836882 glycosyl hydrolase family protein 17 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POBVFM O.I. C.G. H.G.
137.5 99.9 68.9 At5g43870 834409 phosphoinositide binding F:phosphoinositide binding;P:signal transduction;C:plasma membrane;OPBMFV O.I. C.G. H.G.
134.8 99.9 65.0 At5g25830 832652 zinc finger (GATA type) family protein F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM O.I. C.G. H.G.
133.8 99.9 108.2 At5g61280 836249 remorin family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;POMBF O.I. C.G. H.G.
133.8 99.9 41.0 At3g14000 820614 ATBRXL2 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. O.I. C.G. H.G.
132.5 99.9 110.4 At1g60030 842297 xanthine/uracil permease family protein F:transmembrane transporter activity;P:transport;C:plasma membrane, membrane;BOMPFAV O.I. C.G. H.G.
132.4 99.9 131.7 At2g14620 815950 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative F:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBO O.I. C.G. H.G.
130.1 99.9 246.2 At5g19110 832031 extracellular dermal glycoprotein-related / EDGP-related F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P O.I. C.G. H.G.
127.2 99.9 128.2 At5g17850 831653 cation exchanger, putative (CAX8) F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA O.I. C.G. H.G.
127.0 99.9 42.6 At3g49690 824131 MYB84 (MYB DOMAIN PROTEIN 84) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. " O.I. C.G. H.G.
126.1 99.9 97.8 At5g25370 832609 PLDALPHA3 (PHOSPHLIPASE D ALPHA 3) member of C2-PLD subfamily. Analyses on the gene structures/sequences, overall amino acid sequences, and domain structures indicate that PLDalpha3 is most closely related to other two PLDalphas than to other PLDs. Phylogenetic analysis has not identified a true ortholog for PLDalpha3. Involved in hyperosmotic response. O.I. C.G. H.G.
124.1 99.9 145.4 At3g03610 821208 phagocytosis and cell motility protein ELMO1-related F:molecular_function unknown;P:phagocytosis;C:cytoskeleton;MPOF O.I. C.G. H.G.
123.6 99.9 78.4 At1g76040 843936 CPK29 member of Calcium Dependent Protein Kinase O.I. C.G. H.G.
121.6 99.9 94.0 At3g13590 820561 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PO O.I. C.G. H.G.
121.2 99.9 25.3 At2g43840 818988 UDP-glucoronosyl/UDP-glucosyl transferase family protein UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. O.I. C.G. H.G.
118.1 99.9 97.9 At1g58340 842203 ZF14 F:drug transporter activity, antiporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM O.I. C.G. H.G.
116.7 99.9 39.8 At3g49760 824138 AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF O.I. C.G. H.G.
116.0 99.9 126.5 At5g37540 833732 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM O.I. C.G. H.G.
115.6 99.9 31.4 At4g36740 829827 ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
111.4 99.9 81.2 At5g17980 831665 C2 domain-containing protein F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPVA O.I. C.G. H.G.
110.3 99.9 99.0 At1g23760 838987 JP630 Encodes aromatic rich glycoprotein JP630. O.I. C.G. H.G.
108.4 99.9 50.5 At5g25490 832624 zinc finger (Ran-binding) family protein F:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOF O.I. C.G. H.G.
107.9 99.9 176.8 At2g27140 817256 heat shock family protein F:molecular_function unknown;P:response to heat;C:membrane;PBOM O.I. C.G. H.G.
106.1 99.9 78.3 At1g74510 843792 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA O.I. C.G. H.G.
102.9 99.9 44.2 At4g28330 828948 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
102.4 99.9 72.1 At3g18260 821354 reticulon family protein (RTNLB9) F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOF O.I. C.G. H.G.
102.3 99.9 77.5 At5g45320 834568 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
101.5 99.9 105.5 At3g17380 821002 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
100.4 99.9 116.8 At4g09950 826585 avirulence-responsive family protein / avirulence induced gene (AIG1) family protein F:GTP binding;P:response to bacterium;C:cellular_component unknown;MOBFPAV O.I. C.G. H.G.
96.6 99.9 80.4 At5g43890 834411 YUCCA5 Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype O.I. C.G. H.G.
96.5 99.9 38.5 At4g29230 829044 anac075 (Arabidopsis NAC domain containing protein 75) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV O.I. C.G. H.G.
96.4 99.9 129.9 At4g37445 829899 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
96.2 99.9 86.0 At2g39830 818570 DAR2 (DA1-RELATED PROTEIN 2) F:zinc ion binding;P:unknown;C:chloroplast;MOPFB O.I. C.G. H.G.
95.4 99.9 66.0 At2g27740 817320 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAV O.I. C.G. H.G.
94.9 99.9 52.5 At5g50120 835077 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:heterotrimeric G-protein complex;MFOBPA O.I. C.G. H.G.
94.5 99.9 132.0 At5g18970 832015 AWPM-19-like membrane family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;P O.I. C.G. H.G.
93.9 99.9 53.9 At1g13920 837952 remorin family protein F:DNA binding;P:biological_process unknown;C:cellular_component unknown;MOFPBV O.I. C.G. H.G.
92.8 99.9 150.7 At5g01890 831677 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
92.8 99.9 90.4 At1g50630 841485 unknown protein F:unknown;P:unknown;C:unknown;PO O.I. C.G. H.G.
92.2 99.9 116.4 At4g33490 829486 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;POMF O.I. C.G. H.G.
92.2 99.9 102.5 At1g05770 837085 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
91.8 99.9 103.2 At4g21310 827879 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
89.8 99.9 126.9 At5g59490 836068 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA O.I. C.G. H.G.
89.0 99.9 34.5 At5g26190 832688 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:intracellular;POM O.I. C.G. H.G.
87.0 99.9 114.3 At5g50720 835144 ATHVA22E Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. O.I. C.G. H.G.
85.9 99.9 27.4 At2g34540 818017 unknown protein F:unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
85.7 99.9 164.1 At3g20570 821604 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBFMV O.I. C.G. H.G.
84.8 99.9 61.2 At5g56450 835746 mitochondrial substrate carrier family protein F:binding, transporter activity;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO O.I. C.G. H.G.
84.2 99.9 119.6 At4g18340 827561 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
83.2 99.9 28.3 At2g31085 817664 CLE6 (CLAVATA3/ESR-RELATED 6) Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo. O.I. C.G. H.G.
82.8 99.9 88.3 At5g56790 835781 protein kinase family protein F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
82.7 99.9 46.9 At4g15340 827200 ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1) Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast. O.I. C.G. H.G.
81.9 99.9 58.0 At2g46700 819282 calcium-dependent protein kinase, putative / CDPK, putative F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVA O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
445.8	100.0	117.4	At5g43380	834356	TOPP6	encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.	O.I.	C.G.	H.G.
405.6	100.0	124.1	At1g26450	839186	beta-1,3-glucanase-related	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;OMFPBVA	O.I.	C.G.	H.G.
327.7	100.0	145.1	At2g41300	818729	strictosidine synthase	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;PMBOA	O.I.	C.G.	H.G.
327.2	100.0	89.7	At3g18670	821398	ankyrin repeat family protein	F:protein binding;P:unknown;C:unknown;MOPBFAV	O.I.	C.G.	H.G.
305.8	100.0	51.9	At3g28600	822490	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
299.3	100.0	185.3	At5g02140	831881	thaumatin-like protein, putative	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBOV	O.I.	C.G.	H.G.
271.0	100.0	244.2	At1g73370	843672	SUS6 (SUCROSE SYNTHASE 6)	Encodes a protein with sucrose synthase activity (SUS6).	O.I.	C.G.	H.G.
270.1	100.0	123.0	At5g11100	830978	SYTD	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPFO	O.I.	C.G.	H.G.
252.3	100.0	175.9	At3g58350	825004	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMB	O.I.	C.G.	H.G.
238.6	100.0	194.7	At5g48060	834858	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
235.0	100.0	70.4	At1g65910	842903	anac028 (Arabidopsis NAC domain containing protein 28)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
232.1	100.0	44.5	At1g11915	837741	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
228.2	100.0	64.7	At5g35670	833540	iqd33 (IQ-domain 33)	F:calmodulin binding;P:biological_process unknown;C:unknown;PBMOF	O.I.	C.G.	H.G.
221.3	100.0	78.1	At1g70130	843349	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
220.4	100.0	80.5	At3g03200	821226	anac045 (Arabidopsis NAC domain containing protein 45)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;POVMB	O.I.	C.G.	H.G.
218.7	100.0	113.3	At3g17690	821036	ATCNGC19	member of Cyclic nucleotide gated channel family	O.I.	C.G.	H.G.
217.2	100.0	113.8	At1g05100	839324	MAPKKK18	member of MEKK subfamily	O.I.	C.G.	H.G.
216.8	100.0	41.0	At3g26350	822239	-	F:unknown;P:unknown;C:chloroplast;MPFOVBA	O.I.	C.G.	H.G.
211.6	100.0	114.2	At2g36650	818237	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV	O.I.	C.G.	H.G.
204.2	100.0	53.6	At5g40630	834062	ubiquitin family protein	F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV	O.I.	C.G.	H.G.
201.0	100.0	143.0	At3g15800	820823	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PO	O.I.	C.G.	H.G.
193.7	100.0	51.7	At1g64700	842778	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
188.6	100.0	95.2	At2g15310	816020	ATARFB1A (ADP-ribosylation factor B1A)	A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor (GI:861205) (Chlamydomonas reinhardtii), other ARFs and ARF-like proteins.	O.I.	C.G.	H.G.
186.4	100.0	103.0	At5g58690	835983	phosphoinositide-specific phospholipase C family protein	F:phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity, calcium ion binding;P:signal transduction, intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
184.7	100.0	195.9	At1g05760	837084	RTM1 (restricted tev movement 1)	Specifically restrict the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance	O.I.	C.G.	H.G.
180.4	100.0	234.1	At5g04890	830370	RTM2 (RESTRICTED TEV MOVEMENT 2)	Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs).	O.I.	C.G.	H.G.
174.4	100.0	69.1	At4g24250	828526	MLO13 (MILDEW RESISTANCE LOCUS O 13)	A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO13 belongs to the clade II, with ATMLO1 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and also in placenta of developing siliques, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).	O.I.	C.G.	H.G.
172.2	100.0	120.7	At5g56720	835773	malate dehydrogenase, cytosolic, putative	F:in 6 functions;P:cellular carbohydrate metabolic process, glycolysis, malate metabolic process, carbohydrate metabolic process, metabolic process;C:membrane;BOMPFA	O.I.	C.G.	H.G.
172.0	100.0	62.0	At2g31940	817752	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
171.6	100.0	122.3	At5g07710	830664	exonuclease family protein	F:exonuclease activity, nucleic acid binding;P:biological_process unknown;C:intracellular;BOP	O.I.	C.G.	H.G.
169.2	100.0	87.7	At4g36710	829824	transcription factor	F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
167.7	100.0	88.0	At5g20870	832210	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFOB	O.I.	C.G.	H.G.
166.9	100.0	36.2	At1g75590	843894	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
165.9	100.0	262.6	At3g07420	819930	NS2	Encodes an asparaginyl-tRNA synthetase.	O.I.	C.G.	H.G.
162.7	99.9	39.6	At1g54330	841874	ANAC020 (Arabidopsis NAC domain containing protein 20)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
161.9	99.9	101.0	At1g06490	837160	ATGSL07 (glucan synthase-like 7)	encodes a gene similar to callose synthase	O.I.	C.G.	H.G.
159.4	99.9	151.4	At1g77700	844106	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:cellular_component unknown;PFMBOV	O.I.	C.G.	H.G.
156.0	99.9	70.7	At3g22400	821808	LOX5	F:electron carrier activity, oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, lipoxygenase activity, iron ion binding, metal ion binding;P:root development;C:chloroplast;PMBFO	O.I.	C.G.	H.G.
155.8	99.9	94.9	At1g61760	842473	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
155.5	99.9	48.0	At2g34530	818016	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
154.5	99.9	93.0	At3g10680	820237	heat shock protein-related	F:molecular_function unknown;P:biological_process unknown;C:unknown;OMBFPVA	O.I.	C.G.	H.G.
154.4	99.9	68.3	At5g67050	836840	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:membrane;OPBFMV	O.I.	C.G.	H.G.
151.5	99.9	117.1	At5g49320	834992	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
149.4	99.9	109.6	At5g62960	836416	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
145.1	99.9	103.5	At5g03510	831818	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;MPO	O.I.	C.G.	H.G.
144.9	99.9	43.4	At5g17260	831591	anac086 (Arabidopsis NAC domain containing protein 86)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
138.6	99.9	123.6	At5g37180	833692	SUS5	Encodes a protein with sucrose synthase activity (SUS5).	O.I.	C.G.	H.G.
138.3	99.9	104.6	At5g67460	836882	glycosyl hydrolase family protein 17	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POBVFM	O.I.	C.G.	H.G.
137.5	99.9	68.9	At5g43870	834409	phosphoinositide binding	F:phosphoinositide binding;P:signal transduction;C:plasma membrane;OPBMFV	O.I.	C.G.	H.G.
134.8	99.9	65.0	At5g25830	832652	zinc finger (GATA type) family protein	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:nucleus;PFOM	O.I.	C.G.	H.G.
133.8	99.9	108.2	At5g61280	836249	remorin family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;POMBF	O.I.	C.G.	H.G.
133.8	99.9	41.0	At3g14000	820614	ATBRXL2	Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.	O.I.	C.G.	H.G.
132.5	99.9	110.4	At1g60030	842297	xanthine/uracil permease family protein	F:transmembrane transporter activity;P:transport;C:plasma membrane, membrane;BOMPFAV	O.I.	C.G.	H.G.
132.4	99.9	131.7	At2g14620	815950	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	F:hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, apoplast, cell wall;PFBO	O.I.	C.G.	H.G.
130.1	99.9	246.2	At5g19110	832031	extracellular dermal glycoprotein-related / EDGP-related	F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P	O.I.	C.G.	H.G.
127.2	99.9	128.2	At5g17850	831653	cation exchanger, putative (CAX8)	F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA	O.I.	C.G.	H.G.
127.0	99.9	42.6	At3g49690	824131	MYB84 (MYB DOMAIN PROTEIN 84)	"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "	O.I.	C.G.	H.G.
126.1	99.9	97.8	At5g25370	832609	PLDALPHA3 (PHOSPHLIPASE D ALPHA 3)	member of C2-PLD subfamily. Analyses on the gene structures/sequences, overall amino acid sequences, and domain structures indicate that PLDalpha3 is most closely related to other two PLDalphas than to other PLDs. Phylogenetic analysis has not identified a true ortholog for PLDalpha3. Involved in hyperosmotic response.	O.I.	C.G.	H.G.
124.1	99.9	145.4	At3g03610	821208	phagocytosis and cell motility protein ELMO1-related	F:molecular_function unknown;P:phagocytosis;C:cytoskeleton;MPOF	O.I.	C.G.	H.G.
123.6	99.9	78.4	At1g76040	843936	CPK29	member of Calcium Dependent Protein Kinase	O.I.	C.G.	H.G.
121.6	99.9	94.0	At3g13590	820561	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PO	O.I.	C.G.	H.G.
121.2	99.9	25.3	At2g43840	818988	UDP-glucoronosyl/UDP-glucosyl transferase family protein	UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques.	O.I.	C.G.	H.G.
118.1	99.9	97.9	At1g58340	842203	ZF14	F:drug transporter activity, antiporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM	O.I.	C.G.	H.G.
116.7	99.9	39.8	At3g49760	824138	AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF	O.I.	C.G.	H.G.
116.0	99.9	126.5	At5g37540	833732	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
115.6	99.9	31.4	At4g36740	829827	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
111.4	99.9	81.2	At5g17980	831665	C2 domain-containing protein	F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPVA	O.I.	C.G.	H.G.
110.3	99.9	99.0	At1g23760	838987	JP630	Encodes aromatic rich glycoprotein JP630.	O.I.	C.G.	H.G.
108.4	99.9	50.5	At5g25490	832624	zinc finger (Ran-binding) family protein	F:binding, zinc ion binding;P:biological_process unknown;C:intracellular;MPOF	O.I.	C.G.	H.G.
107.9	99.9	176.8	At2g27140	817256	heat shock family protein	F:molecular_function unknown;P:response to heat;C:membrane;PBOM	O.I.	C.G.	H.G.
106.1	99.9	78.3	At1g74510	843792	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA	O.I.	C.G.	H.G.
102.9	99.9	44.2	At4g28330	828948	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
102.4	99.9	72.1	At3g18260	821354	reticulon family protein (RTNLB9)	F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;MPOF	O.I.	C.G.	H.G.
102.3	99.9	77.5	At5g45320	834568	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
101.5	99.9	105.5	At3g17380	821002	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
100.4	99.9	116.8	At4g09950	826585	avirulence-responsive family protein / avirulence induced gene (AIG1) family protein	F:GTP binding;P:response to bacterium;C:cellular_component unknown;MOBFPAV	O.I.	C.G.	H.G.
96.6	99.9	80.4	At5g43890	834411	YUCCA5	Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype	O.I.	C.G.	H.G.
96.5	99.9	38.5	At4g29230	829044	anac075 (Arabidopsis NAC domain containing protein 75)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOFBV	O.I.	C.G.	H.G.
96.4	99.9	129.9	At4g37445	829899	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
96.2	99.9	86.0	At2g39830	818570	DAR2 (DA1-RELATED PROTEIN 2)	F:zinc ion binding;P:unknown;C:chloroplast;MOPFB	O.I.	C.G.	H.G.
95.4	99.9	66.0	At2g27740	817320	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAV	O.I.	C.G.	H.G.
94.9	99.9	52.5	At5g50120	835077	transducin family protein / WD-40 repeat family protein	F:nucleotide binding;P:biological_process unknown;C:heterotrimeric G-protein complex;MFOBPA	O.I.	C.G.	H.G.
94.5	99.9	132.0	At5g18970	832015	AWPM-19-like membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;P	O.I.	C.G.	H.G.
93.9	99.9	53.9	At1g13920	837952	remorin family protein	F:DNA binding;P:biological_process unknown;C:cellular_component unknown;MOFPBV	O.I.	C.G.	H.G.
92.8	99.9	150.7	At5g01890	831677	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
92.8	99.9	90.4	At1g50630	841485	unknown protein	F:unknown;P:unknown;C:unknown;PO	O.I.	C.G.	H.G.
92.2	99.9	116.4	At4g33490	829486	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;POMF	O.I.	C.G.	H.G.
92.2	99.9	102.5	At1g05770	837085	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
91.8	99.9	103.2	At4g21310	827879	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
89.8	99.9	126.9	At5g59490	836068	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA	O.I.	C.G.	H.G.
89.0	99.9	34.5	At5g26190	832688	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:intracellular;POM	O.I.	C.G.	H.G.
87.0	99.9	114.3	At5g50720	835144	ATHVA22E	Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration.	O.I.	C.G.	H.G.
85.9	99.9	27.4	At2g34540	818017	unknown protein	F:unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
85.7	99.9	164.1	At3g20570	821604	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBFMV	O.I.	C.G.	H.G.
84.8	99.9	61.2	At5g56450	835746	mitochondrial substrate carrier family protein	F:binding, transporter activity;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPO	O.I.	C.G.	H.G.
84.2	99.9	119.6	At4g18340	827561	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
83.2	99.9	28.3	At2g31085	817664	CLE6 (CLAVATA3/ESR-RELATED 6)	Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can replace CLV3 function in vivo.	O.I.	C.G.	H.G.
82.8	99.9	88.3	At5g56790	835781	protein kinase family protein	F:protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
82.7	99.9	46.9	At4g15340	827200	ATPEN1 (ARABIDOPSIS THALIANA PENTACYCLIC TRITERPENE SYNTHASE 1)	Encodes a protein that catalyzes the production of the tricyclic triterpene arabidiol when expressed in yeast.	O.I.	C.G.	H.G.
81.9	99.9	58.0	At2g46700	819282	calcium-dependent protein kinase, putative / CDPK, putative	F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:unknown;MOPFBVA	O.I.	C.G.	H.G.

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GSM ID	GSM184924
Assay name	Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3
GSE experiment	GSE7641: Expression analysis of root cell-types after treatment with salt

Microarray experiments to specifically-expressed genes

GSM ID GSM184924 Assay name Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3 GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt

GSM ID GSM184924

Assay name Arabidopsis, root cells, protophloem, 140 mM NaCl, replicate 3

GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt