CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184898

Assay name Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1

GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
501.9 100.0 308.4 At4g02090 827380 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
388.0 100.0 442.4 At3g11550 820328 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
387.4 100.0 112.8 At4g22110 828300 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
343.2 100.0 288.4 At1g71740 843504 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
316.9 100.0 109.5 At1g43020 840901 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO O.I. C.G. H.G.
308.0 100.0 149.3 At4g26140 828720 BGAL12 (beta-galactosidase 12) putative beta-galactosidase O.I. C.G. H.G.
297.6 100.0 258.6 At2g27370 817280 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
290.8 100.0 116.6 At2g37950 818372 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF O.I. C.G. H.G.
262.3 100.0 192.7 At1g03920 839369 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVA O.I. C.G. H.G.
252.0 100.0 264.8 At2g39430 818528 disease resistance-responsive protein-related / dirigent protein-related F:molecular_function unknown;P:lignan biosynthetic process;C:endomembrane system;PABFO O.I. C.G. H.G.
247.9 100.0 170.6 At5g06200 830507 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
226.9 100.0 128.7 At2g22620 816793 lyase F:lyase activity;P:carbohydrate metabolic process;C:unknown;PFBO O.I. C.G. H.G.
224.2 100.0 102.8 At4g05170 825865 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFBOM O.I. C.G. H.G.
220.5 100.0 92.0 At5g57620 835866 MYB36 (myb domain protein 36) Encodes a putative transcription factor (MYB36). O.I. C.G. H.G.
217.1 100.0 39.5 At4g21340 827884 B70 F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus, intracellular;P O.I. C.G. H.G.
214.8 100.0 71.9 At5g51680 835242 hydroxyproline-rich glycoprotein family protein F:molecular_function unknown;P:biological_process unknown;C:cell wall;MPOBFVA O.I. C.G. H.G.
205.4 100.0 515.7 At5g42180 834223 peroxidase 64 (PER64) (P64) (PRXR4) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBM O.I. C.G. H.G.
194.0 100.0 73.6 At1g61240 842417 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
187.7 100.0 183.5 At5g59490 836068 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA O.I. C.G. H.G.
183.8 100.0 403.4 At5g66390 836771 peroxidase 72 (PER72) (P72) (PRXR8) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
181.7 100.0 79.0 At1g09090 837430 ATRBOHB (respiratory burst oxidase homolog B) F:in 7 functions;P:response to heat, defense response;C:integral to membrane, membrane;MPFOBA O.I. C.G. H.G.
174.7 100.0 53.0 At2g15300 816019 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
172.5 100.0 21.5 At3g50190 824181 unknown protein F:unknown;P:biological_process unknown;C:chloroplast;PO O.I. C.G. H.G.
171.7 100.0 54.6 At5g26310 832700 UGT72E3 UGT72E3 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl alcohol as well as sinapic acid. The enzyme is thought to be involved in lignin- and phenylpropanoid metabolism. A knockdown mutant line (72E3KD) was obtained using RNAi silencing. No reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype, in contrast with the knockdown line constructed for UGT72E2 displayed a twofold reduction in the these phenylpropanoid 4-O-glucosides. O.I. C.G. H.G.
171.3 100.0 34.6 At1g08670 837389 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO O.I. C.G. H.G.
166.0 100.0 183.4 At2g32300 817791 UCC1 (UCLACYANIN 1) Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. O.I. C.G. H.G.
162.1 99.9 184.9 At1g61590 842455 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
160.4 99.9 45.6 At2g44480 819055 BGLU17 (BETA GLUCOSIDASE 17) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
160.3 99.9 188.7 At4g17215 827433 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
157.5 99.9 112.2 At3g03700 821183 unknown protein F:unknown;P:biological_process unknown;C:unknown;PFOM O.I. C.G. H.G.
150.5 99.9 347.9 At1g30750 839955 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPV O.I. C.G. H.G.
147.6 99.9 224.6 At2g30210 817571 LAC3 (laccase 3) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
143.6 99.9 74.7 At2g28650 817414 ATEXO70H8 (exocyst subunit EXO70 family protein H8) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
140.2 99.9 182.1 At2g21100 816645 disease resistance-responsive protein-related / dirigent protein-related F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
138.1 99.9 324.5 At5g65530 836679 protein kinase, putative F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
124.8 99.9 402.9 At4g13580 826991 disease resistance-responsive family protein F:molecular_function unknown;P:unknown;C:endomembrane system;PB O.I. C.G. H.G.
123.5 99.9 85.4 At5g35580 833523 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
123.0 99.9 149.7 At1g16370 838207 OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA O.I. C.G. H.G.
116.1 99.9 127.6 At3g22830 821854 AT-HSFA6B member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
112.5 99.9 147.7 At4g17280 827442 - F:unknown;P:multicellular organismal development;C:membrane;P O.I. C.G. H.G.
112.3 99.9 73.9 At3g23160 821892 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POB O.I. C.G. H.G.
108.9 99.9 39.5 At3g49690 824131 MYB84 (MYB DOMAIN PROTEIN 84) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. " O.I. C.G. H.G.
108.8 99.9 409.1 At2g28670 817416 disease resistance-responsive family protein / fibroin-related F:molecular_function unknown;P:unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
108.8 99.9 224.3 At5g15290 831381 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
106.9 99.9 57.6 At2g40160 818607 - F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
106.3 99.9 532.6 At2g36100 818183 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
103.5 99.9 83.1 At1g14040 837965 - F:unknown;P:unknown;C:integral to membrane;FMPO O.I. C.G. H.G.
102.3 99.9 118.8 At5g37540 833732 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM O.I. C.G. H.G.
101.1 99.9 126.4 At4g20140 827760 GSO1 (GASSHO1) Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. O.I. C.G. H.G.
99.6 99.9 407.6 At1g05260 837028 RCI3 (RARE COLD INDUCIBLE GENE 3) Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. O.I. C.G. H.G.
96.4 99.9 178.3 At5g10830 830950 embryo-abundant protein-related F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA O.I. C.G. H.G.
84.0 99.9 95.9 At2g16720 816173 MYB7 (MYB DOMAIN PROTEIN 7) Encodes a member of MYB3R- and R2R3- type MYB- encoding genes O.I. C.G. H.G.
83.4 99.9 100.1 At1g80820 844421 CCR2 (CINNAMOYL COA REDUCTASE) Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis. O.I. C.G. H.G.
81.7 99.9 223.3 At4g11290 826731 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
80.3 99.9 41.5 At4g17220 827434 ATMAP70-5 (microtubule-associated proteins 70-5) Encodes a microtubule associated protein (MAP70-5). Expressed in all tissues. O.I. C.G. H.G.
79.8 99.9 110.0 At2g25160 817054 CYP82F1 member of CYP82F O.I. C.G. H.G.
78.2 99.9 91.1 At4g38620 830018 MYB4 Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. O.I. C.G. H.G.
78.0 99.9 30.8 At1g72850 843616 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMFO O.I. C.G. H.G.
77.6 99.9 248.3 At4g26320 828738 AGP13 (arabinogalactan protein 13) F:unknown;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
75.4 99.9 55.5 At3g45070 823642 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF O.I. C.G. H.G.
74.2 99.9 63.8 At3g56230 824789 speckle-type POZ protein-related F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVF O.I. C.G. H.G.
67.6 99.9 73.2 At1g70140 843350 ATFH8 (formin 8) Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton. O.I. C.G. H.G.
65.9 99.8 96.1 At4g25680 828673 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF O.I. C.G. H.G.
65.6 99.8 33.3 At4g15330 827199 CYP705A1 a member of the cytochrome P450 family O.I. C.G. H.G.
61.0 99.8 17.5 At5g15900 831447 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
60.4 99.8 93.6 At4g25390 828642 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
59.4 99.8 102.5 At5g61340 836255 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
57.8 99.8 57.9 At5g47530 834803 auxin-responsive protein, putative F:unknown;P:multicellular organismal development;C:membrane;PMFOB O.I. C.G. H.G.
56.0 99.8 148.2 At1g17190 838290 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
55.4 99.8 57.2 At2g24260 816961 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
52.9 99.8 16.9 At1g76250 843958 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;POM O.I. C.G. H.G.
51.2 99.8 143.5 At2g36310 818204 URH1 (URIDINE-RIBOHYDROLASE 1) F:hydrolase activity, inosine nucleosidase activity, adenosine nucleosidase activity, uridine nucleosidase activity;P:uridine catabolic process;C:cytosol;BOMFPA O.I. C.G. H.G.
51.1 99.8 42.7 At5g10520 830917 RBK1 (Rop Binding protein Kinases 1) F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:defense response, incompatible interaction;C:cytosol, endomembrane system;MPOBFVA O.I. C.G. H.G.
50.5 99.8 61.8 At3g47210 823874 unknown protein F:unknown;P:biological_process unknown;C:plasma membrane;PM O.I. C.G. H.G.
49.9 99.8 173.5 At4g13660 827000 PRR2 (PINORESINOL REDUCTASE 2) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol. O.I. C.G. H.G.
49.2 99.8 65.9 At2g46510 819262 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive. O.I. C.G. H.G.
49.0 99.8 153.4 At1g32100 840102 PRR1 (PINORESINOL REDUCTASE 1) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. O.I. C.G. H.G.
48.3 99.8 33.8 At2g20625 816589 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
47.5 99.8 65.0 At1g73640 843698 AtRABA6a (Arabidopsis Rab GTPase homolog A6a) F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA O.I. C.G. H.G.
45.8 99.8 146.1 At5g19110 832031 extracellular dermal glycoprotein-related / EDGP-related F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P O.I. C.G. H.G.
45.7 99.8 52.5 At2g16980 816201 tetracycline transporter F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF O.I. C.G. H.G.
45.6 99.8 103.8 At5g34940 833437 AtGUS3 (Arabidopsis thaliana glucuronidase 3) The protein is predicted (WoLF PSORT program) to be membrane-associated. O.I. C.G. H.G.
44.5 99.8 38.0 At2g23560 816888 MES7 (METHYL ESTERASE 7) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, and methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeGA4, or MEGA9 in vitro. MES7 appears to be involved in MeSA hydrolysis in planta. Expression of MES7 can restore systemic acquired resistance in SAR-deficient tobacco plants. O.I. C.G. H.G.
44.0 99.8 103.9 At5g28020 832872 CYSD2 (CYSTEINE SYNTHASE D2) Encodes cysteine synthase CysD2. O.I. C.G. H.G.
43.5 99.8 28.0 At1g76210 843954 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
43.1 99.8 24.0 At5g40270 834025 metal-dependent phosphohydrolase HD domain-containing protein F:catalytic activity;P:biological_process unknown;C:cellular_component unknown;BOAMPFV O.I. C.G. H.G.
42.9 99.8 25.5 At5g01830 831850 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMFBV O.I. C.G. H.G.
42.7 99.8 29.5 At5g56230 835722 PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2) F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMOB O.I. C.G. H.G.
41.6 99.8 94.2 At2g07708 815383 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
41.5 99.8 213.3 At5g01040 831877 LAC8 (laccase 8) putative laccase, knockout mutant showed early flowering O.I. C.G. H.G.
41.2 99.8 321.1 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF O.I. C.G. H.G.
41.2 99.8 52.2 At3g50300 824192 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
39.7 99.8 152.8 At5g18680 831986 AtTLP11 (TUBBY LIKE PROTEIN 11) Member of TLP family O.I. C.G. H.G.
39.7 99.8 138.4 At1g44970 841062 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM O.I. C.G. H.G.
39.6 99.8 64.0 At4g22460 828341 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
39.4 99.8 8.6 At1g65890 842901 AAE12 (ACYL ACTIVATING ENZYME 12) F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
39.0 99.8 31.5 At3g59710 825140 short-chain dehydrogenase/reductase (SDR) family protein F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPA O.I. C.G. H.G.
38.1 99.8 69.5 At3g05920 819761 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMOBVFA O.I. C.G. H.G.
38.0 99.8 39.4 At2g20290 816548 XIG member of Myosin-like proteins O.I. C.G. H.G.
37.7 99.7 239.6 At4g25810 828686 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) xyloglucan endotransglycosylase-related protein (XTR6) O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
501.9	100.0	308.4	At4g02090	827380	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
388.0	100.0	442.4	At3g11550	820328	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
387.4	100.0	112.8	At4g22110	828300	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
343.2	100.0	288.4	At1g71740	843504	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
316.9	100.0	109.5	At1g43020	840901	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO	O.I.	C.G.	H.G.
308.0	100.0	149.3	At4g26140	828720	BGAL12 (beta-galactosidase 12)	putative beta-galactosidase	O.I.	C.G.	H.G.
297.6	100.0	258.6	At2g27370	817280	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
290.8	100.0	116.6	At2g37950	818372	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
262.3	100.0	192.7	At1g03920	839369	protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:cytosol, plasma membrane;MOPFBVA	O.I.	C.G.	H.G.
252.0	100.0	264.8	At2g39430	818528	disease resistance-responsive protein-related / dirigent protein-related	F:molecular_function unknown;P:lignan biosynthetic process;C:endomembrane system;PABFO	O.I.	C.G.	H.G.
247.9	100.0	170.6	At5g06200	830507	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
226.9	100.0	128.7	At2g22620	816793	lyase	F:lyase activity;P:carbohydrate metabolic process;C:unknown;PFBO	O.I.	C.G.	H.G.
224.2	100.0	102.8	At4g05170	825865	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFBOM	O.I.	C.G.	H.G.
220.5	100.0	92.0	At5g57620	835866	MYB36 (myb domain protein 36)	Encodes a putative transcription factor (MYB36).	O.I.	C.G.	H.G.
217.1	100.0	39.5	At4g21340	827884	B70	F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus, intracellular;P	O.I.	C.G.	H.G.
214.8	100.0	71.9	At5g51680	835242	hydroxyproline-rich glycoprotein family protein	F:molecular_function unknown;P:biological_process unknown;C:cell wall;MPOBFVA	O.I.	C.G.	H.G.
205.4	100.0	515.7	At5g42180	834223	peroxidase 64 (PER64) (P64) (PRXR4)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plant-type cell wall;PFOBM	O.I.	C.G.	H.G.
194.0	100.0	73.6	At1g61240	842417	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
187.7	100.0	183.5	At5g59490	836068	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA	O.I.	C.G.	H.G.
183.8	100.0	403.4	At5g66390	836771	peroxidase 72 (PER72) (P72) (PRXR8)	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
181.7	100.0	79.0	At1g09090	837430	ATRBOHB (respiratory burst oxidase homolog B)	F:in 7 functions;P:response to heat, defense response;C:integral to membrane, membrane;MPFOBA	O.I.	C.G.	H.G.
174.7	100.0	53.0	At2g15300	816019	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
172.5	100.0	21.5	At3g50190	824181	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast;PO	O.I.	C.G.	H.G.
171.7	100.0	54.6	At5g26310	832700	UGT72E3	UGT72E3 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl alcohol as well as sinapic acid. The enzyme is thought to be involved in lignin- and phenylpropanoid metabolism. A knockdown mutant line (72E3KD) was obtained using RNAi silencing. No reduction in coniferyl alcohol 4-O-glucoside and sinapyl alcohol 4-O-glucoside was detected in this line compared to wildtype, in contrast with the knockdown line constructed for UGT72E2 displayed a twofold reduction in the these phenylpropanoid 4-O-glucosides.	O.I.	C.G.	H.G.
171.3	100.0	34.6	At1g08670	837389	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	F:binding;P:biological_process unknown;C:cellular_component unknown;MFPO	O.I.	C.G.	H.G.
166.0	100.0	183.4	At2g32300	817791	UCC1 (UCLACYANIN 1)	Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods.	O.I.	C.G.	H.G.
162.1	99.9	184.9	At1g61590	842455	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
160.4	99.9	45.6	At2g44480	819055	BGLU17 (BETA GLUCOSIDASE 17)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
160.3	99.9	188.7	At4g17215	827433	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
157.5	99.9	112.2	At3g03700	821183	unknown protein	F:unknown;P:biological_process unknown;C:unknown;PFOM	O.I.	C.G.	H.G.
150.5	99.9	347.9	At1g30750	839955	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBMFPV	O.I.	C.G.	H.G.
147.6	99.9	224.6	At2g30210	817571	LAC3 (laccase 3)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
143.6	99.9	74.7	At2g28650	817414	ATEXO70H8 (exocyst subunit EXO70 family protein H8)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
140.2	99.9	182.1	At2g21100	816645	disease resistance-responsive protein-related / dirigent protein-related	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
138.1	99.9	324.5	At5g65530	836679	protein kinase, putative	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
124.8	99.9	402.9	At4g13580	826991	disease resistance-responsive family protein	F:molecular_function unknown;P:unknown;C:endomembrane system;PB	O.I.	C.G.	H.G.
123.5	99.9	85.4	At5g35580	833523	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
123.0	99.9	149.7	At1g16370	838207	OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA	O.I.	C.G.	H.G.
116.1	99.9	127.6	At3g22830	821854	AT-HSFA6B	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
112.5	99.9	147.7	At4g17280	827442	-	F:unknown;P:multicellular organismal development;C:membrane;P	O.I.	C.G.	H.G.
112.3	99.9	73.9	At3g23160	821892	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POB	O.I.	C.G.	H.G.
108.9	99.9	39.5	At3g49690	824131	MYB84 (MYB DOMAIN PROTEIN 84)	"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "	O.I.	C.G.	H.G.
108.8	99.9	409.1	At2g28670	817416	disease resistance-responsive family protein / fibroin-related	F:molecular_function unknown;P:unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
108.8	99.9	224.3	At5g15290	831381	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
106.9	99.9	57.6	At2g40160	818607	-	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
106.3	99.9	532.6	At2g36100	818183	integral membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
103.5	99.9	83.1	At1g14040	837965	-	F:unknown;P:unknown;C:integral to membrane;FMPO	O.I.	C.G.	H.G.
102.3	99.9	118.8	At5g37540	833732	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
101.1	99.9	126.4	At4g20140	827760	GSO1 (GASSHO1)	Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.	O.I.	C.G.	H.G.
99.6	99.9	407.6	At1g05260	837028	RCI3 (RARE COLD INDUCIBLE GENE 3)	Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.	O.I.	C.G.	H.G.
96.4	99.9	178.3	At5g10830	830950	embryo-abundant protein-related	F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA	O.I.	C.G.	H.G.
84.0	99.9	95.9	At2g16720	816173	MYB7 (MYB DOMAIN PROTEIN 7)	Encodes a member of MYB3R- and R2R3- type MYB- encoding genes	O.I.	C.G.	H.G.
83.4	99.9	100.1	At1g80820	844421	CCR2 (CINNAMOYL COA REDUCTASE)	Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.	O.I.	C.G.	H.G.
81.7	99.9	223.3	At4g11290	826731	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
80.3	99.9	41.5	At4g17220	827434	ATMAP70-5 (microtubule-associated proteins 70-5)	Encodes a microtubule associated protein (MAP70-5). Expressed in all tissues.	O.I.	C.G.	H.G.
79.8	99.9	110.0	At2g25160	817054	CYP82F1	member of CYP82F	O.I.	C.G.	H.G.
78.2	99.9	91.1	At4g38620	830018	MYB4	Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.	O.I.	C.G.	H.G.
78.0	99.9	30.8	At1g72850	843616	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBMFO	O.I.	C.G.	H.G.
77.6	99.9	248.3	At4g26320	828738	AGP13 (arabinogalactan protein 13)	F:unknown;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
75.4	99.9	55.5	At3g45070	823642	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF	O.I.	C.G.	H.G.
74.2	99.9	63.8	At3g56230	824789	speckle-type POZ protein-related	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MPOVF	O.I.	C.G.	H.G.
67.6	99.9	73.2	At1g70140	843350	ATFH8 (formin 8)	Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.	O.I.	C.G.	H.G.
65.9	99.8	96.1	At4g25680	828673	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
65.6	99.8	33.3	At4g15330	827199	CYP705A1	a member of the cytochrome P450 family	O.I.	C.G.	H.G.
61.0	99.8	17.5	At5g15900	831447	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
60.4	99.8	93.6	At4g25390	828642	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
59.4	99.8	102.5	At5g61340	836255	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
57.8	99.8	57.9	At5g47530	834803	auxin-responsive protein, putative	F:unknown;P:multicellular organismal development;C:membrane;PMFOB	O.I.	C.G.	H.G.
56.0	99.8	148.2	At1g17190	838290	ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
55.4	99.8	57.2	At2g24260	816961	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
52.9	99.8	16.9	At1g76250	843958	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;POM	O.I.	C.G.	H.G.
51.2	99.8	143.5	At2g36310	818204	URH1 (URIDINE-RIBOHYDROLASE 1)	F:hydrolase activity, inosine nucleosidase activity, adenosine nucleosidase activity, uridine nucleosidase activity;P:uridine catabolic process;C:cytosol;BOMFPA	O.I.	C.G.	H.G.
51.1	99.8	42.7	At5g10520	830917	RBK1 (Rop Binding protein Kinases 1)	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:defense response, incompatible interaction;C:cytosol, endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
50.5	99.8	61.8	At3g47210	823874	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane;PM	O.I.	C.G.	H.G.
49.9	99.8	173.5	At4g13660	827000	PRR2 (PINORESINOL REDUCTASE 2)	Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.	O.I.	C.G.	H.G.
49.2	99.8	65.9	At2g46510	819262	ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)	Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.	O.I.	C.G.	H.G.
49.0	99.8	153.4	At1g32100	840102	PRR1 (PINORESINOL REDUCTASE 1)	Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.	O.I.	C.G.	H.G.
48.3	99.8	33.8	At2g20625	816589	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
47.5	99.8	65.0	At1g73640	843698	AtRABA6a (Arabidopsis Rab GTPase homolog A6a)	F:GTP binding;P:protein transport, small GTPase mediated signal transduction;C:plasma membrane;MOFPBVA	O.I.	C.G.	H.G.
45.8	99.8	146.1	At5g19110	832031	extracellular dermal glycoprotein-related / EDGP-related	F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P	O.I.	C.G.	H.G.
45.7	99.8	52.5	At2g16980	816201	tetracycline transporter	F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF	O.I.	C.G.	H.G.
45.6	99.8	103.8	At5g34940	833437	AtGUS3 (Arabidopsis thaliana glucuronidase 3)	The protein is predicted (WoLF PSORT program) to be membrane-associated.	O.I.	C.G.	H.G.
44.5	99.8	38.0	At2g23560	816888	MES7 (METHYL ESTERASE 7)	Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, and methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeGA4, or MEGA9 in vitro. MES7 appears to be involved in MeSA hydrolysis in planta. Expression of MES7 can restore systemic acquired resistance in SAR-deficient tobacco plants.	O.I.	C.G.	H.G.
44.0	99.8	103.9	At5g28020	832872	CYSD2 (CYSTEINE SYNTHASE D2)	Encodes cysteine synthase CysD2.	O.I.	C.G.	H.G.
43.5	99.8	28.0	At1g76210	843954	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
43.1	99.8	24.0	At5g40270	834025	metal-dependent phosphohydrolase HD domain-containing protein	F:catalytic activity;P:biological_process unknown;C:cellular_component unknown;BOAMPFV	O.I.	C.G.	H.G.
42.9	99.8	25.5	At5g01830	831850	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;POMFBV	O.I.	C.G.	H.G.
42.7	99.8	29.5	At5g56230	835722	PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)	F:molecular_function unknown;P:vesicle-mediated transport;C:endoplasmic reticulum;PMOB	O.I.	C.G.	H.G.
41.6	99.8	94.2	At2g07708	815383	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
41.5	99.8	213.3	At5g01040	831877	LAC8 (laccase 8)	putative laccase, knockout mutant showed early flowering	O.I.	C.G.	H.G.
41.2	99.8	321.1	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	O.I.	C.G.	H.G.
41.2	99.8	52.2	At3g50300	824192	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
39.7	99.8	152.8	At5g18680	831986	AtTLP11 (TUBBY LIKE PROTEIN 11)	Member of TLP family	O.I.	C.G.	H.G.
39.7	99.8	138.4	At1g44970	841062	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM	O.I.	C.G.	H.G.
39.6	99.8	64.0	At4g22460	828341	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
39.4	99.8	8.6	At1g65890	842901	AAE12 (ACYL ACTIVATING ENZYME 12)	F:catalytic activity;P:metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
39.0	99.8	31.5	At3g59710	825140	short-chain dehydrogenase/reductase (SDR) family protein	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPA	O.I.	C.G.	H.G.
38.1	99.8	69.5	At3g05920	819761	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;PMOBVFA	O.I.	C.G.	H.G.
38.0	99.8	39.4	At2g20290	816548	XIG	member of Myosin-like proteins	O.I.	C.G.	H.G.
37.7	99.7	239.6	At4g25810	828686	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	xyloglucan endotransglycosylase-related protein (XTR6)	O.I.	C.G.	H.G.

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GSM ID	GSM184898
Assay name	Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1
GSE experiment	GSE7641: Expression analysis of root cell-types after treatment with salt

Microarray experiments to specifically-expressed genes

GSM ID GSM184898 Assay name Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1 GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt

GSM ID GSM184898

Assay name Arabidopsis, root cells, endodermis and quiescent center, standard conditions, replicate 1

GSE experiment GSE7641: Expression analysis of root cell-types after treatment with salt