Microarray experiments to specifically-expressed genes

GSM ID	GSM184829
Assay name	Whole Seed at the globular stage, biological replicate 2
GSE experiment	GSE6414: Expression data from soybean seed compartments with embryos at the globular stage

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.	Other DB
403.1	100.0	26.1	Gma.860.1.S1_at	AW705885	-	-	7e-9	At5g62740	band 7 family protein	O.I.	C.G.	H.G.	Please select
398.9	100.0	1.7	Gma.6737.1.A1_at	BE659086	-	-	3e-4	At3g02310	SEP2 (SEPALLATA 2)	O.I.	C.G.	H.G.	Please select
335.2	100.0	42.3	Gma.982.1.S1_at	BF219577	-	-	2e+0	At2g22190	catalytic/ trehalose-phosphatase	O.I.	C.G.	H.G.	Please select
334.4	100.0	0.4	Gma.8039.1.A1_s_at	CD417361	-	-	8e-18	At1g60060	unknown protein	O.I.	C.G.	H.G.	Please select
269.4	100.0	1.6	Gma.10787.2.S1_a_at	BE023083	-	-	2e-1	At1g62790	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
267.0	100.0	1.1	GmaAffx.11559.1.A1_at	AW100581	-	-	2e+0	At1g62760	invertase/pectin methylesterase inhibitor family protein	O.I.	C.G.	H.G.	Please select
245.4	100.0	2.4	Gma.10787.1.S1_a_at	BG650304	-	-	2e+0	At3g23040	unknown protein	O.I.	C.G.	H.G.	Please select
235.9	100.0	90.7	GmaAffx.26533.1.A1_s_at	BE659836	-	-	7e-1	At2g24260	basic helix-loop-helix (bHLH) family protein	O.I.	C.G.	H.G.	Please select
204.3	100.0	8.0	GmaAffx.51641.1.A1_at	BU544035	-	-	4e-1	At5g44574	unknown protein	O.I.	C.G.	H.G.	Please select
190.9	100.0	18.2	GmaAffx.68724.1.A1_at	BI970438	-	-	3e+0	At2g40650	pre-mRNA splicing factor PRP38 family protein	O.I.	C.G.	H.G.	Please select
185.3	100.0	23.8	Gma.7205.1.A1_at	AW760424	-	-	1e+0	At2g13570	NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)	O.I.	C.G.	H.G.	Please select
162.1	100.0	6.8	GmaAffx.26457.1.S1_at	BE608818	-	-	3e+0	At5g62280	unknown protein	O.I.	C.G.	H.G.	Please select
159.3	100.0	37.0	GmaAffx.13543.1.A1_at	BG650523	-	-	6e-3	At5g20950	glycosyl hydrolase family 3 protein	O.I.	C.G.	H.G.	Please select
156.1	100.0	2.8	Gma.5271.1.A1_s_at	CD394118	-	-	3e+0	At5g09370	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	C.G.	H.G.	Please select
148.5	100.0	0.7	Gma.13962.1.A1_at	CD411941	-	-	3e+0	At2g32905	unknown protein	O.I.	C.G.	H.G.	Please select
145.3	100.0	37.5	GmaAffx.78421.1.S1_at	BE822184	-	-	1e+0	At2g45220	pectinesterase family protein	O.I.	C.G.	H.G.	Please select
134.2	100.0	34.9	Gma.4462.1.S1_at	BI942329	-	-	6e-1	At1g04340	lesion inducing protein-related	O.I.	C.G.	H.G.	Please select
134.1	100.0	5.3	GmaAffx.86537.1.A1_at	BE657872	-	-	9e+0	At5g62140	unknown protein	O.I.	C.G.	H.G.	Please select
133.4	100.0	56.3	GmaAffx.7093.1.S1_at	BM092487	-	-	3e-21	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	C.G.	H.G.	Please select
129.3	100.0	55.2	GmaAffx.43987.1.S1_at	AW596871	-	-	5e-12	At1g61720	BAN (BANYULS)	O.I.	C.G.	H.G.	Please select
128.1	100.0	10.2	Gma.9176.1.S1_at	CA802590	-	-	2e-2	At3g50740	UGT72E1 (UDP-glucosyl transferase 72E1)	O.I.	C.G.	H.G.	Please select
127.2	100.0	0.0	Gma.16818.1.S1_at	AF244889.1	receptor-like protein kinase 2	-	3e-51	At5g65700	BAM1 (BARELY ANY MERISTEM 1)	O.I.	C.G.	H.G.	Please select
126.6	100.0	2.1	GmaAffx.4331.1.A1_at	BG551366	-	-	1e+0	At3g43970	unknown protein	O.I.	C.G.	H.G.	Please select
123.8	100.0	10.9	Gma.13254.1.A1_at	CD390844	-	-	2e-2	At4g28100	unknown protein	O.I.	C.G.	H.G.	Please select
122.2	100.0	5.5	GmaAffx.25551.1.S1_at	BE822342	-	-	1e+0	At4g16380	metal ion binding	O.I.	C.G.	H.G.	Please select
116.4	100.0	8.7	Gma.8382.1.S1_at	BE658963	-	-	2e-9	At2g34300	dehydration-responsive protein-related	O.I.	C.G.	H.G.	Please select
116.4	100.0	0.6	GmaAffx.768.1.A1_at	BE821548	-	-	2e+0	At1g62210	unknown protein	O.I.	C.G.	H.G.	Please select
114.8	100.0	12.0	Gma.9448.1.S1_at	CA802955	-	-	5e-1	At4g37610	BT5 (BTB AND TAZ DOMAIN PROTEIN 5)	O.I.	C.G.	H.G.	Please select
114.5	100.0	20.9	Gma.11881.1.A1_at	AW433203	-	-	3e+0	At1g34047	-	O.I.	C.G.	H.G.	Please select
112.7	100.0	4.2	GmaAffx.20164.1.A1_at	CD408842	-	-	3e-19	At1g48410	AGO1 (ARGONAUTE 1)	O.I.	C.G.	H.G.	Please select
110.2	100.0	0.0	PsAffx.psZO010iH04r_s_at	PsAffx.psZO010iH04r	-	-	8e-14	At5g59970	histone H4	O.I.	C.G.	H.G.	Please select
110.0	100.0	38.7	Gma.4099.1.S1_at	BG651846	-	-	4e-13	At2g28470	BGAL8 (beta-galactosidase 8)	O.I.	C.G.	H.G.	Please select
109.5	100.0	13.3	GmaAffx.52757.1.S1_at	BQ785411	MADS transcription factor	-	9e-40	At1g24260	SEP3 (SEPALLATA3)	O.I.	C.G.	H.G.	Please select
108.7	100.0	37.6	GmaAffx.18846.1.S1_at	BM091991	-	-	8e-4	At1g24130	transducin family protein / WD-40 repeat family protein	O.I.	C.G.	H.G.	Please select
107.6	100.0	0.1	GmaAffx.11880.1.S1_at	AW395418	-	-	7e-2	At2g43740	-	O.I.	C.G.	H.G.	Please select
107.0	100.0	86.0	GmaAffx.62443.1.S1_at	AW099879	-	-	7e-1	At1g12470	Pep3/Vps18/deep orange family protein	O.I.	C.G.	H.G.	Please select
105.8	100.0	0.1	GmaAffx.17324.1.S1_at	BE800373	-	-	4e+0	At3g58100	PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5)	O.I.	C.G.	H.G.	Please select
102.6	100.0	0.5	GmaAffx.20625.1.A1_at	AI856336	-	-	1e-2	At2g35230	VQ motif-containing protein	O.I.	C.G.	H.G.	Please select
98.2	100.0	0.0	GmaAffx.61110.1.S1_at	CA785201	-	-	9e-10	At4g23496	SP1L5 (SPIRAL1-LIKE5)	O.I.	C.G.	H.G.	Please select
97.8	100.0	0.2	GmaAffx.62176.1.S1_at	BF325475	-	-	4e+0	At1g02205	CER1 (ECERIFERUM 1)	O.I.	C.G.	H.G.	Please select
97.7	100.0	0.2	GmaAffx.52704.3.S1_at	AW423584	WRKY29 protein	-	1e-2	At2g37260	TTG2 (TRANSPARENT TESTA GLABRA 2)	O.I.	C.G.	H.G.	Please select
97.0	100.0	32.0	Gma.5313.1.S1_at	AF167556.1	dihydroflavonol-4-reductase DFR1	-	1e-14	At5g42800	DFR (DIHYDROFLAVONOL 4-REDUCTASE)	O.I.	C.G.	H.G.	Please select
96.6	100.0	2.5	Gma.15768.2.A1_at	CD407554	-	-	1e-5	At2g41540	GPDHC1	O.I.	C.G.	H.G.	Please select
96.1	100.0	0.3	GmaAffx.79004.1.S1_at	BU761215	MADS-box protein	-	2e-17	At4g18960	AG (AGAMOUS)	O.I.	C.G.	H.G.	Please select
93.7	100.0	7.8	GmaAffx.73593.1.S1_at	BF423430	-	-	6e-8	At1g66180	aspartyl protease family protein	O.I.	C.G.	H.G.	Please select
93.7	100.0	0.0	HgAffx.20738.1.S1_at	BI749015	-	-	8e-1	At5g45040	cytochrome c6 (ATC6)	O.I.	C.G.	H.G.	Please select
92.2	100.0	42.4	Gma.11166.1.S1_at	AW705829	lipoxygenase-9	-	8e-1	At3g22400	LOX5	O.I.	C.G.	H.G.	Please select
90.6	100.0	10.3	GmaAffx.1045.1.A1_at	BU549585	-	-	9e-20	At3g57880	C2 domain-containing protein	O.I.	C.G.	H.G.	Please select
90.6	100.0	0.4	GmaAffx.68716.1.A1_at	BI969878	-	-	3e+0	At5g51130	methyltransferase	O.I.	C.G.	H.G.	Please select
87.9	100.0	7.0	Gma.13475.1.S1_at	CD398711	polygalacturonase precursor	-	1e-19	At1g60590	polygalacturonase, putative / pectinase, putative	O.I.	C.G.	H.G.	Please select
87.8	100.0	1.7	GmaAffx.43328.1.S1_at	BI945801	-	-	4e+0	At2g32785	-	O.I.	C.G.	H.G.	Please select
86.1	100.0	15.4	GmaAffx.39476.1.S1_at	CD416090	-	-	3e-12	At5g60210	-	O.I.	C.G.	H.G.	Please select
85.3	100.0	3.9	Gma.7778.1.S1_at	BQ452585	-	-	1e-3	At2g40550	ETG1 (E2F TARGET GENE 1)	O.I.	C.G.	H.G.	Please select
85.1	100.0	0.1	Gma.13616.1.A1_at	CD401662	-	-	3e+0	At5g38110	ASF1B (ANTI- SILENCING FUNCTION 1B)	O.I.	C.G.	H.G.	Please select
84.4	100.0	0.1	Gma.12935.1.A1_at	CD396444	-	-	2e+0	At4g18510	CLE2 (CLAVATA3/ESR-RELATED)	O.I.	C.G.	H.G.	Please select
81.0	100.0	6.7	Gma.8362.1.S1_at	BU550790	-	-	5e+0	At5g67390	unknown protein	O.I.	C.G.	H.G.	Please select
79.0	100.0	0.5	GmaAffx.82106.1.S1_at	BI427245	-	-	1e-3	At2g31070	TCP10 (TCP DOMAIN PROTEIN 10)	O.I.	C.G.	H.G.	Please select
76.3	100.0	3.8	Gma.9805.1.S1_at	CA937224	-	-	4e+0	At5g61270	PIF7 (PHYTOCHROME-INTERACTING FACTOR7)	O.I.	C.G.	H.G.	Please select
76.1	100.0	0.1	GmaAffx.65223.1.A1_at	BU544126	-	-	1e+0	At2g32487	unknown protein	O.I.	C.G.	H.G.	Please select
74.9	100.0	8.7	GmaAffx.10143.1.S1_at	BE823422	-	-	7e-10	At5g26850	-	O.I.	C.G.	H.G.	Please select
74.9	100.0	0.7	Gma.14126.1.A1_at	CD416155	-	-	3e+0	At3g27230	-	O.I.	C.G.	H.G.	Please select
73.9	100.0	1.6	Gma.9710.1.A1_at	CA934978	-	-	3e+0	At5g55650	unknown protein	O.I.	C.G.	H.G.	Please select
72.4	100.0	1.6	GmaAffx.1317.1.A1_at	BI969862	-	-	7e-1	At5g39290	ATEXP26 (ARABIDOPSIS THALIANA EXPANSIN A26)	O.I.	C.G.	H.G.	Please select
71.1	100.0	17.5	Gma.2371.1.S1_at	BU550313	-	-	5e-88	At1g44900	ATP binding / DNA binding / DNA-dependent ATPase	O.I.	C.G.	H.G.	Please select
70.9	100.0	0.0	Gma.8276.1.A1_at	BU549942	-	-	3e-2	At1g52670	biotin/lipoyl attachment domain-containing protein	O.I.	C.G.	H.G.	Please select
70.5	100.0	0.3	Gma.13800.1.A1_at	CD405906	-	-	5e+0	At3g21840	ASK7 (ARABIDOPSIS SKP1-LIKE 7)	O.I.	C.G.	H.G.	Please select
69.0	100.0	13.2	Gma.3041.1.S1_at	BM307216	-	-	2e+0	At5g65020	ANNAT2 (Annexin Arabidopsis 2)	O.I.	C.G.	H.G.	Please select
68.8	100.0	38.1	Gma.5444.2.S1_at	BG237903	-	-	1e-17	At2g39050	hydroxyproline-rich glycoprotein family protein	O.I.	C.G.	H.G.	Please select
67.6	100.0	5.2	GmaAffx.10562.1.A1_at	BU549816	-	-	8e-1	At5g06890	-	O.I.	C.G.	H.G.	Please select
67.5	100.0	1.1	Gma.16818.1.S1_x_at	AF244889.1	receptor-like protein kinase 2	-	3e-51	At5g65700	BAM1 (BARELY ANY MERISTEM 1)	O.I.	C.G.	H.G.	Please select
67.4	100.0	11.3	Gma.3457.1.S1_at	CD411851	-	-	2e-5	At1g27360	squamosa promoter-binding protein-like 11 (SPL11)	O.I.	C.G.	H.G.	Please select
67.2	100.0	9.5	Gma.9483.1.A1_at	CA819741	-	-	5e+0	At4g14830	unknown protein	O.I.	C.G.	H.G.	Please select
66.8	100.0	1.8	Gma.15650.1.A1_at	CD412516	-	-	3e+0	At5g22870	harpin-induced protein-related / HIN1-related / harpin-responsive protein-related	O.I.	C.G.	H.G.	Please select
66.0	100.0	0.8	GmaAffx.67003.1.S1_at	BE022807	-	-	3e+0	At5g45940	atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11)	O.I.	C.G.	H.G.	Please select
65.5	100.0	0.3	Gma.1379.3.S1_a_at	BM527366	-	-	2e-2	At4g09610	GASA2 (GAST1 PROTEIN HOMOLOG 2)	O.I.	C.G.	H.G.	Please select
65.2	100.0	219.1	Gma.7454.1.S1_a_at	CD405901	-	-	3e-9	At4g14550	IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)	O.I.	C.G.	H.G.	Please select
65.1	100.0	8.1	Gma.16122.1.S1_at	CD413696	-	-	4e-14	At1g02800	ATCEL2	O.I.	C.G.	H.G.	Please select
64.9	100.0	0.0	GmaAffx.67057.1.S1_at	BE059919	-	-	8e-1	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	C.G.	H.G.	Please select
64.8	100.0	11.8	Gma.11124.1.S1_at	BM091967	-	-	1e+0	At5g04950	NAS1 (NICOTIANAMINE SYNTHASE 1)	O.I.	C.G.	H.G.	Please select
64.4	99.9	0.7	GmaAffx.7093.2.S1_at	BU083586	-	-	1e+1	At5g59840	Ras-related GTP-binding family protein	O.I.	C.G.	H.G.	Please select
63.6	99.9	140.9	soybean_rRNA_274_at	soybean_rRNA_274	-	-	2e+1	At2g16955	unknown protein	O.I.	C.G.	H.G.	Please select
63.4	99.9	0.0	GmaAffx.53885.1.S1_at	BE807568	-	-	8e-1	At2g28510	Dof-type zinc finger domain-containing protein	O.I.	C.G.	H.G.	Please select
62.6	99.9	0.6	GmaAffx.42474.1.A1_at	AW310127	-	-	4e-9	At5g65640	bHLH093 (beta HLH protein 93)	O.I.	C.G.	H.G.	Please select
62.3	99.9	3.9	GmaAffx.67608.1.S1_at	BF066275	-	-	3e+0	At4g29658	PRA1.C (PRENYLATED RAB ACCEPTOR 1.C)	O.I.	C.G.	H.G.	Please select
61.7	99.9	36.4	Gma.4018.1.S1_at	AW423444	-	-	1e+0	At3g49470	NACA2 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2)	O.I.	C.G.	H.G.	Please select
61.0	99.9	3.1	GmaAffx.29651.1.A1_s_at	CD412244	-	-	5e-8	At5g48720	XRI1 (X-RAY INDUCED TRANSCRIPT 1)	O.I.	C.G.	H.G.	Please select
60.6	99.9	0.0	GmaAffx.75113.1.A1_at	CD411446	-	-	7e-1	At3g60245	60S ribosomal protein L37a (RPL37aC)	O.I.	C.G.	H.G.	Please select
60.2	99.9	1.0	Gma.13892.1.A1_at	CD409347	-	-	9e-3	At1g67630	POLA2 (DNA POLYMERASE ALPHA 2)	O.I.	C.G.	H.G.	Please select
59.6	99.9	0.2	GmaAffx.53206.1.S1_at	BE820464	-	-	9e-8	At2g04570	GDSL-motif lipase/hydrolase family protein	O.I.	C.G.	H.G.	Please select
59.4	99.9	4.0	Gma.11296.1.S1_at	BM522997	-	-	1e-45	At2g07690	minichromosome maintenance family protein / MCM family protein	O.I.	C.G.	H.G.	Please select
59.2	99.9	2.0	GmaAffx.70533.1.A1_at	CD407936	-	-	3e+0	Atmg00910	-	O.I.	C.G.	H.G.	Please select
59.1	99.9	3.0	GmaAffx.7290.1.A1_at	BE658988	-	-	5e+0	At5g06265	hyaluronan mediated motility receptor-related	O.I.	C.G.	H.G.	Please select
58.2	99.9	0.7	GmaAffx.69812.1.A1_at	BU544180	-	-	2e-5	At2g45630	oxidoreductase family protein	O.I.	C.G.	H.G.	Please select
58.2	99.9	0.1	Gma.4275.1.S1_at	BI787770	-	-	2e-1	At5g20060	phospholipase/carboxylesterase family protein	O.I.	C.G.	H.G.	Please select
58.0	99.9	35.8	Gma.16405.1.A1_at	CD400314	-	-	3e+0	At5g61680	pectinesterase family protein	O.I.	C.G.	H.G.	Please select
57.3	99.9	1.0	GmaAffx.22146.1.A1_at	BG653381	-	-	3e-3	At2g22970	serine carboxypeptidase S10 family protein	O.I.	C.G.	H.G.	Please select
57.2	99.9	3.5	Gma.9714.1.S1_at	CD393504	-	-	6e-1	At2g02990	RNS1 (RIBONUCLEASE 1)	O.I.	C.G.	H.G.	Please select
57.1	99.9	36.0	Gma.1163.1.S1_at	AW423421	Anthocyanidin synthase	-	3e-21	At4g22880	LDOX (LEUCOANTHOCYANIDIN DIOXYGENASE)	O.I.	C.G.	H.G.	Please select
57.0	99.9	1.6	Gma.5468.2.S1_a_at	BE802025	-	-	4e-20	At2g28470	BGAL8 (beta-galactosidase 8)	O.I.	C.G.	H.G.	Please select
56.0	99.9	0.1	Gma.9089.1.A1_at	BU544319	-	-	9e-8	At4g19640	ARA7	O.I.	C.G.	H.G.	Please select

Back to the CoP portal site

Back to the KAGIANA project homepage