CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184634

Assay name Arabidopsis, root cells, 140 mM NaCl, replicate 1

GSE experiment GSE7636: Expression analysis of the effect of protoplasting and FACS sorting in roots

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
216.9 100.0 81.9 At5g43380 834356 TOPP6 encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers. O.I. C.G. H.G.
168.9 100.0 117.0 At1g58340 842203 ZF14 F:drug transporter activity, antiporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM O.I. C.G. H.G.
163.6 99.9 98.8 At1g05100 839324 MAPKKK18 member of MEKK subfamily O.I. C.G. H.G.
152.4 99.9 43.8 At1g60750 3767587 oxidoreductase F:oxidoreductase activity;P:oxidation reduction;C:unknown O.I. C.G. H.G.
129.3 99.9 129.3 At5g17850 831653 cation exchanger, putative (CAX8) F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA O.I. C.G. H.G.
121.4 99.9 241.4 At4g35350 829688 XCP1 (XYLEM CYSTEINE PEPTIDASE 1) tracheary element vacuolar protein O.I. C.G. H.G.
119.6 99.9 85.9 At2g36650 818237 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV O.I. C.G. H.G.
112.6 99.9 241.6 At5g51890 835264 peroxidase encodes peroxidase involved in the lignification of tracheary elements (TE) in roots O.I. C.G. H.G.
108.8 99.9 225.1 At5g19110 832031 extracellular dermal glycoprotein-related / EDGP-related F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P O.I. C.G. H.G.
103.4 99.9 119.4 At5g37540 833732 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM O.I. C.G. H.G.
102.5 99.9 135.6 At5g59490 836068 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA O.I. C.G. H.G.
102.5 99.9 26.2 At5g55090 835600 MAPKKK15 member of MEKK subfamily O.I. C.G. H.G.
102.3 99.9 122.7 At2g44300 819038 lipid transfer protein-related F:lipid binding;P:lipid transport;C:plasma membrane, anchored to membrane;P O.I. C.G. H.G.
100.3 99.9 67.7 At2g27740 817320 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAV O.I. C.G. H.G.
100.2 99.9 149.4 At2g27550 817302 ATC (ARABIDOPSIS THALIANA CENTRORADIALIS) encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations. O.I. C.G. H.G.
94.6 99.9 87.4 At4g33930 829538 glycine-rich protein Encodes a protein with 14.6% glycine residues, similar to hyphally regulated protein from Candida albicans, PIR2:S58135 O.I. C.G. H.G.
92.9 99.9 45.6 At2g31940 817752 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
91.4 99.9 41.5 At5g01380 831895 transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;MOFPBVA O.I. C.G. H.G.
89.3 99.9 35.7 At3g49690 824131 MYB84 (MYB DOMAIN PROTEIN 84) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. " O.I. C.G. H.G.
88.7 99.9 362.9 At1g20850 838677 XCP2 (xylem cysteine peptidase 2) F:peptidase activity, cysteine-type peptidase activity;P:proteolysis, developmental programmed cell death;C:cell wall;MOPVBAF O.I. C.G. H.G.
85.5 99.9 87.1 At1g23760 838987 JP630 Encodes aromatic rich glycoprotein JP630. O.I. C.G. H.G.
84.8 99.9 48.4 At1g70130 843349 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
84.4 99.9 115.3 At4g18425 827573 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
84.1 99.9 203.1 At3g06460 819823 GNS1/SUR4 membrane family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFOPV O.I. C.G. H.G.
78.8 99.9 47.0 At2g32510 817812 MAPKKK17 member of MEKK subfamily O.I. C.G. H.G.
78.8 99.9 46.0 At4g25380 828641 zinc finger (AN1-like) family protein F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF O.I. C.G. H.G.
76.2 99.9 50.1 At1g53700 841807 WAG1 (WAG 1) The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. O.I. C.G. H.G.
74.8 99.9 102.5 At3g22830 821854 AT-HSFA6B member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
73.6 99.9 153.6 At1g20823 838674 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV O.I. C.G. H.G.
72.1 99.9 61.7 At4g08160 826365 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein Encodes a putative glycosyl hydrolase family 10 protein (xylanase). O.I. C.G. H.G.
70.2 99.9 40.8 At3g62160 825389 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
69.7 99.9 31.2 At2g30400 817591 OFP2 (OVATE FAMILY PROTEIN 2) F:unknown;P:N-terminal protein myristoylation;C:unknown;POMFB O.I. C.G. H.G.
68.9 99.9 169.4 At3g27200 822339 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBMF O.I. C.G. H.G.
67.8 99.9 30.9 At5g40630 834062 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV O.I. C.G. H.G.
67.5 99.8 55.4 At4g36710 829824 transcription factor F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO O.I. C.G. H.G.
67.3 99.8 219.7 At3g19240 821458 - F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;FOPM O.I. C.G. H.G.
67.3 99.8 41.0 At2g43870 818991 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA O.I. C.G. H.G.
66.5 99.8 44.6 At1g71960 843527 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV O.I. C.G. H.G.
66.0 99.8 174.7 At3g57010 824868 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA O.I. C.G. H.G.
65.3 99.8 24.0 At3g28600 822490 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
65.1 99.8 165.1 At3g49190 824080 condensation domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF O.I. C.G. H.G.
64.4 99.8 29.5 At3g49760 824138 AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF O.I. C.G. H.G.
64.0 99.8 69.3 At2g32610 817821 ATCSLB01 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
63.3 99.8 110.9 At4g38410 829998 dehydrin, putative F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;POMFBA O.I. C.G. H.G.
62.0 99.8 252.9 At1g06090 837118 fatty acid desaturase family protein F:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPV O.I. C.G. H.G.
60.4 99.8 170.4 At1g32100 840102 PRR1 (PINORESINOL REDUCTASE 1) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol. O.I. C.G. H.G.
58.7 99.8 136.9 At2g16900 816192 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POMVFBA O.I. C.G. H.G.
57.7 99.8 32.9 At1g20490 838637 AMP-dependent synthetase and ligase family protein F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, metabolic process;C:unknown;BOMFPAV O.I. C.G. H.G.
55.9 99.8 27.8 At1g64700 842778 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
55.5 99.8 68.9 At5g40020 833999 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO O.I. C.G. H.G.
55.3 99.8 57.2 At2g24260 816961 basic helix-loop-helix (bHLH) family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO O.I. C.G. H.G.
55.2 99.8 116.6 At1g66500 842968 zinc finger (C2H2-type) family protein F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP O.I. C.G. H.G.
54.7 99.8 101.6 At5g60020 836124 LAC17 (laccase 17) putative laccase, a member of laccase family of genes (17 members in Arabidopsis). O.I. C.G. H.G.
54.7 99.8 60.5 At5g43890 834411 YUCCA5 Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype O.I. C.G. H.G.
52.8 99.8 121.3 At3g16800 820933 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV O.I. C.G. H.G.
52.7 99.8 29.6 At3g12955 820481 auxin-responsive protein-related F:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;P O.I. C.G. H.G.
52.5 99.8 231.4 At1g62570 842554 FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4) belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates O.I. C.G. H.G.
52.5 99.8 17.7 At3g59850 825155 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
50.8 99.8 30.2 At5g60720 836193 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM O.I. C.G. H.G.
50.5 99.8 107.7 At4g18780 827612 IRX1 (IRREGULAR XYLEM 1) Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling. O.I. C.G. H.G.
50.1 99.8 30.9 At3g55720 824738 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
47.8 99.8 31.5 At4g28640 828982 IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11) Auxin induced gene, IAA11 (IAA11). O.I. C.G. H.G.
47.1 99.8 51.7 At5g58690 835983 phosphoinositide-specific phospholipase C family protein F:phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity, calcium ion binding;P:signal transduction, intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;MFOP O.I. C.G. H.G.
46.9 99.8 32.9 At4g37730 829929 AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFB O.I. C.G. H.G.
46.8 99.8 133.6 At1g60190 842314 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA O.I. C.G. H.G.
46.7 99.8 227.7 At1g17180 838289 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
46.6 99.8 49.6 At1g80110 844351 ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11) F:carbohydrate binding;P:unknown;C:nucleus;P O.I. C.G. H.G.
46.3 99.8 86.2 At5g15870 831444 glycosyl hydrolase family 81 protein F:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVB O.I. C.G. H.G.
46.2 99.8 19.8 At4g36740 829827 ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
46.0 99.8 51.6 At1g74510 843792 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA O.I. C.G. H.G.
45.9 99.8 164.2 At2g22860 816817 ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR) Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor. O.I. C.G. H.G.
45.7 99.8 147.7 At3g16440 820892 ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B) myrosinase-binding protein-like protein (AtMLP-300B) mRNA, O.I. C.G. H.G.
45.7 99.8 92.1 At1g04610 839474 flavin-containing monooxygenase / FMO (YUCCA3) F:oxidoreductase activity;P:auxin biosynthetic process;C:unknown;BOFMPA O.I. C.G. H.G.
45.6 99.8 41.8 At1g69600 843296 ZFHD1 (ZINC FINGER HOMEODOMAIN 1) Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid. O.I. C.G. H.G.
44.8 99.8 27.2 At5g51520 835226 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
44.8 99.8 20.4 At4g36160 829773 ANAC076 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 76) Encodes a NAC-domain transcription factor. Expressed in the vascular tissue. O.I. C.G. H.G.
44.6 99.8 336.6 At3g44190 823541 pyridine nucleotide-disulphide oxidoreductase family protein F:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMP O.I. C.G. H.G.
44.2 99.8 44.3 At1g10560 837597 PUB18 (PLANT U-BOX 18) Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
44.1 99.8 71.9 At2g01300 814658 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
43.5 99.8 111.3 At5g62520 836372 SRO5 (SIMILAR TO RCD ONE 5) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. O.I. C.G. H.G.
43.4 99.8 37.0 At2g14095 815895 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFB O.I. C.G. H.G.
43.2 99.8 114.8 At4g35480 829700 RHA3B Encodes a putative RING-H2 finger protein RHA3b. O.I. C.G. H.G.
43.2 99.8 29.3 At1g69080 843240 universal stress protein (USP) family protein F:molecular_function unknown;P:response to stress;C:unknown;PM O.I. C.G. H.G.
42.8 99.8 380.4 At5g05410 830424 DREB2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes. O.I. C.G. H.G.
42.8 99.8 262.2 At1g78340 844169 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
42.6 99.8 88.3 At1g69260 843257 AFP1 (ABI FIVE BINDING PROTEIN) F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMF O.I. C.G. H.G.
42.6 99.8 18.3 At1g75590 843894 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
42.5 99.8 32.7 At1g04180 837024 flavin-containing monooxygenase family protein / FMO family protein F:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMPA O.I. C.G. H.G.
42.4 99.8 118.7 At2g18210 816336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
42.3 99.8 252.8 At1g52060 841635 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB O.I. C.G. H.G.
41.9 99.8 117.2 At1g23800 838991 ALDH2B7 Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product. O.I. C.G. H.G.
41.6 99.8 100.8 At5g01890 831677 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
41.2 99.8 60.0 At2g37090 818285 IRX9 (IRREGULAR XYLEM 9) The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis. O.I. C.G. H.G.
41.1 99.8 42.7 At3g18660 821397 PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1) Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch. O.I. C.G. H.G.
41.0 99.8 219.4 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
40.8 99.8 29.1 At5g40880 834089 WD-40 repeat family protein / zfwd3 protein (ZFWD3) F:zinc ion binding, nucleic acid binding;P:N-terminal protein myristoylation;C:cellular_component unknown;MFBOPA O.I. C.G. H.G.
40.6 99.8 142.5 At4g17490 827463 ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
40.4 99.8 232.7 At1g52050 841634 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO O.I. C.G. H.G.
40.4 99.8 167.0 At1g77450 844081 anac032 (Arabidopsis NAC domain containing protein 32) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
40.2 99.8 70.2 At1g63180 842622 UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3) Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
216.9	100.0	81.9	At5g43380	834356	TOPP6	encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.	O.I.	C.G.	H.G.
168.9	100.0	117.0	At1g58340	842203	ZF14	F:drug transporter activity, antiporter activity, transporter activity;P:response to nematode;C:membrane;BOPFAM	O.I.	C.G.	H.G.
163.6	99.9	98.8	At1g05100	839324	MAPKKK18	member of MEKK subfamily	O.I.	C.G.	H.G.
152.4	99.9	43.8	At1g60750	3767587	oxidoreductase	F:oxidoreductase activity;P:oxidation reduction;C:unknown	O.I.	C.G.	H.G.
129.3	99.9	129.3	At5g17850	831653	cation exchanger, putative (CAX8)	F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA	O.I.	C.G.	H.G.
121.4	99.9	241.4	At4g35350	829688	XCP1 (XYLEM CYSTEINE PEPTIDASE 1)	tracheary element vacuolar protein	O.I.	C.G.	H.G.
119.6	99.9	85.9	At2g36650	818237	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV	O.I.	C.G.	H.G.
112.6	99.9	241.6	At5g51890	835264	peroxidase	encodes peroxidase involved in the lignification of tracheary elements (TE) in roots	O.I.	C.G.	H.G.
108.8	99.9	225.1	At5g19110	832031	extracellular dermal glycoprotein-related / EDGP-related	F:aspartic-type endopeptidase activity;P:proteolysis, N-terminal protein myristoylation;C:endomembrane system;P	O.I.	C.G.	H.G.
103.4	99.9	119.4	At5g37540	833732	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PFOM	O.I.	C.G.	H.G.
102.5	99.9	135.6	At5g59490	836068	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity;P:metabolic process;C:cellular_component unknown;OBPFA	O.I.	C.G.	H.G.
102.5	99.9	26.2	At5g55090	835600	MAPKKK15	member of MEKK subfamily	O.I.	C.G.	H.G.
102.3	99.9	122.7	At2g44300	819038	lipid transfer protein-related	F:lipid binding;P:lipid transport;C:plasma membrane, anchored to membrane;P	O.I.	C.G.	H.G.
100.3	99.9	67.7	At2g27740	817320	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPBFAV	O.I.	C.G.	H.G.
100.2	99.9	149.4	At2g27550	817302	ATC (ARABIDOPSIS THALIANA CENTRORADIALIS)	encodes a protein similar to TFL1. overexpression leads to similar phenotype as TFL1 overexpression. expressed specifically in the hypocotyl and null mutation does not result in phenotypes exhibited by TFL1 null mutations.	O.I.	C.G.	H.G.
94.6	99.9	87.4	At4g33930	829538	glycine-rich protein	Encodes a protein with 14.6% glycine residues, similar to hyphally regulated protein from Candida albicans, PIR2:S58135	O.I.	C.G.	H.G.
92.9	99.9	45.6	At2g31940	817752	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
91.4	99.9	41.5	At5g01380	831895	transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
89.3	99.9	35.7	At3g49690	824131	MYB84 (MYB DOMAIN PROTEIN 84)	"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "	O.I.	C.G.	H.G.
88.7	99.9	362.9	At1g20850	838677	XCP2 (xylem cysteine peptidase 2)	F:peptidase activity, cysteine-type peptidase activity;P:proteolysis, developmental programmed cell death;C:cell wall;MOPVBAF	O.I.	C.G.	H.G.
85.5	99.9	87.1	At1g23760	838987	JP630	Encodes aromatic rich glycoprotein JP630.	O.I.	C.G.	H.G.
84.8	99.9	48.4	At1g70130	843349	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
84.4	99.9	115.3	At4g18425	827573	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
84.1	99.9	203.1	At3g06460	819823	GNS1/SUR4 membrane family protein	F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;MFOPV	O.I.	C.G.	H.G.
78.8	99.9	47.0	At2g32510	817812	MAPKKK17	member of MEKK subfamily	O.I.	C.G.	H.G.
78.8	99.9	46.0	At4g25380	828641	zinc finger (AN1-like) family protein	F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF	O.I.	C.G.	H.G.
76.2	99.9	50.1	At1g53700	841807	WAG1 (WAG 1)	The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.	O.I.	C.G.	H.G.
74.8	99.9	102.5	At3g22830	821854	AT-HSFA6B	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
73.6	99.9	153.6	At1g20823	838674	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV	O.I.	C.G.	H.G.
72.1	99.9	61.7	At4g08160	826365	glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein	Encodes a putative glycosyl hydrolase family 10 protein (xylanase).	O.I.	C.G.	H.G.
70.2	99.9	40.8	At3g62160	825389	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
69.7	99.9	31.2	At2g30400	817591	OFP2 (OVATE FAMILY PROTEIN 2)	F:unknown;P:N-terminal protein myristoylation;C:unknown;POMFB	O.I.	C.G.	H.G.
68.9	99.9	169.4	At3g27200	822339	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POBMF	O.I.	C.G.	H.G.
67.8	99.9	30.9	At5g40630	834062	ubiquitin family protein	F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV	O.I.	C.G.	H.G.
67.5	99.8	55.4	At4g36710	829824	transcription factor	F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
67.3	99.8	219.7	At3g19240	821458	-	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;FOPM	O.I.	C.G.	H.G.
67.3	99.8	41.0	At2g43870	818991	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMA	O.I.	C.G.	H.G.
66.5	99.8	44.6	At1g71960	843527	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV	O.I.	C.G.	H.G.
66.0	99.8	174.7	At3g57010	824868	strictosidine synthase family protein	F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endoplasmic reticulum;PMBOA	O.I.	C.G.	H.G.
65.3	99.8	24.0	At3g28600	822490	ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:N-terminal protein myristoylation;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
65.1	99.8	165.1	At3g49190	824080	condensation domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOMAF	O.I.	C.G.	H.G.
64.4	99.8	29.5	At3g49760	824138	AtbZIP5 (Arabidopsis thaliana basic leucine-zipper 5)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOF	O.I.	C.G.	H.G.
64.0	99.8	69.3	At2g32610	817821	ATCSLB01	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
63.3	99.8	110.9	At4g38410	829998	dehydrin, putative	F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;POMFBA	O.I.	C.G.	H.G.
62.0	99.8	252.9	At1g06090	837118	fatty acid desaturase family protein	F:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPV	O.I.	C.G.	H.G.
60.4	99.8	170.4	At1g32100	840102	PRR1 (PINORESINOL REDUCTASE 1)	Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.	O.I.	C.G.	H.G.
58.7	99.8	136.9	At2g16900	816192	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;POMVFBA	O.I.	C.G.	H.G.
57.7	99.8	32.9	At1g20490	838637	AMP-dependent synthetase and ligase family protein	F:4-coumarate-CoA ligase activity;P:phenylpropanoid metabolic process, metabolic process;C:unknown;BOMFPAV	O.I.	C.G.	H.G.
55.9	99.8	27.8	At1g64700	842778	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
55.5	99.8	68.9	At5g40020	833999	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PFMBO	O.I.	C.G.	H.G.
55.3	99.8	57.2	At2g24260	816961	basic helix-loop-helix (bHLH) family protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PMFO	O.I.	C.G.	H.G.
55.2	99.8	116.6	At1g66500	842968	zinc finger (C2H2-type) family protein	F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP	O.I.	C.G.	H.G.
54.7	99.8	101.6	At5g60020	836124	LAC17 (laccase 17)	putative laccase, a member of laccase family of genes (17 members in Arabidopsis).	O.I.	C.G.	H.G.
54.7	99.8	60.5	At5g43890	834411	YUCCA5	Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype	O.I.	C.G.	H.G.
52.8	99.8	121.3	At3g16800	820933	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, cytoplasm;PMOFV	O.I.	C.G.	H.G.
52.7	99.8	29.6	At3g12955	820481	auxin-responsive protein-related	F:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;P	O.I.	C.G.	H.G.
52.5	99.8	231.4	At1g62570	842554	FMO GS-OX4 (FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4)	belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates	O.I.	C.G.	H.G.
52.5	99.8	17.7	At3g59850	825155	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
50.8	99.8	30.2	At5g60720	836193	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM	O.I.	C.G.	H.G.
50.5	99.8	107.7	At4g18780	827612	IRX1 (IRREGULAR XYLEM 1)	Encodes a member of the cellulose synthase family involved in secondary cell wall biosynthesis. Mutants have abnormal xylem formation, reduced cellulose content, and enhanced drought and osmotic stress tolerance. Mediates resistance towards bacterial pathogens via ABA. Confers resistance towards bacterial and fungal pathogens, independent of salicylic acid, ethylene and jasmonate signaling.	O.I.	C.G.	H.G.
50.1	99.8	30.9	At3g55720	824738	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
47.8	99.8	31.5	At4g28640	828982	IAA11 (INDOLE-3-ACETIC ACID INDUCIBLE 11)	Auxin induced gene, IAA11 (IAA11).	O.I.	C.G.	H.G.
47.1	99.8	51.7	At5g58690	835983	phosphoinositide-specific phospholipase C family protein	F:phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity, calcium ion binding;P:signal transduction, intracellular signaling cascade, lipid metabolic process;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
46.9	99.8	32.9	At4g37730	829929	AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMOFB	O.I.	C.G.	H.G.
46.8	99.8	133.6	At1g60190	842314	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, protein binding, binding, zinc ion binding;P:protein ubiquitination;C:ubiquitin ligase complex;PMOFBVA	O.I.	C.G.	H.G.
46.7	99.8	227.7	At1g17180	838289	ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
46.6	99.8	49.6	At1g80110	844351	ATPP2-B11 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2-B11)	F:carbohydrate binding;P:unknown;C:nucleus;P	O.I.	C.G.	H.G.
46.3	99.8	86.2	At5g15870	831444	glycosyl hydrolase family 81 protein	F:hydrolase activity, acting on glycosyl bonds, endo-1,3(4)-beta-glucanase activity;P:response to cyclopentenone;C:unknown;FPOMVB	O.I.	C.G.	H.G.
46.2	99.8	19.8	At4g36740	829827	ATHB40 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 40)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
46.0	99.8	51.6	At1g74510	843792	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA	O.I.	C.G.	H.G.
45.9	99.8	164.2	At2g22860	816817	ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)	Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.	O.I.	C.G.	H.G.
45.7	99.8	147.7	At3g16440	820892	ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B)	myrosinase-binding protein-like protein (AtMLP-300B) mRNA,	O.I.	C.G.	H.G.
45.7	99.8	92.1	At1g04610	839474	flavin-containing monooxygenase / FMO (YUCCA3)	F:oxidoreductase activity;P:auxin biosynthetic process;C:unknown;BOFMPA	O.I.	C.G.	H.G.
45.6	99.8	41.8	At1g69600	843296	ZFHD1 (ZINC FINGER HOMEODOMAIN 1)	Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.	O.I.	C.G.	H.G.
44.8	99.8	27.2	At5g51520	835226	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
44.8	99.8	20.4	At4g36160	829773	ANAC076 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 76)	Encodes a NAC-domain transcription factor. Expressed in the vascular tissue.	O.I.	C.G.	H.G.
44.6	99.8	336.6	At3g44190	823541	pyridine nucleotide-disulphide oxidoreductase family protein	F:electron carrier activity, oxidoreductase activity, FAD binding;P:unknown;C:unknown;BOFAMP	O.I.	C.G.	H.G.
44.2	99.8	44.3	At1g10560	837597	PUB18 (PLANT U-BOX 18)	Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
44.1	99.8	71.9	At2g01300	814658	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
43.5	99.8	111.3	At5g62520	836372	SRO5 (SIMILAR TO RCD ONE 5)	Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.	O.I.	C.G.	H.G.
43.4	99.8	37.0	At2g14095	815895	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;POFB	O.I.	C.G.	H.G.
43.2	99.8	114.8	At4g35480	829700	RHA3B	Encodes a putative RING-H2 finger protein RHA3b.	O.I.	C.G.	H.G.
43.2	99.8	29.3	At1g69080	843240	universal stress protein (USP) family protein	F:molecular_function unknown;P:response to stress;C:unknown;PM	O.I.	C.G.	H.G.
42.8	99.8	380.4	At5g05410	830424	DREB2A	Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes.	O.I.	C.G.	H.G.
42.8	99.8	262.2	At1g78340	844169	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
42.6	99.8	88.3	At1g69260	843257	AFP1 (ABI FIVE BINDING PROTEIN)	F:unknown;P:abscisic acid mediated signaling;C:nucleus;POMF	O.I.	C.G.	H.G.
42.6	99.8	18.3	At1g75590	843894	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
42.5	99.8	32.7	At1g04180	837024	flavin-containing monooxygenase family protein / FMO family protein	F:NADP or NADPH binding, oxidoreductase activity, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity;P:unknown;C:unknown;BOFMPA	O.I.	C.G.	H.G.
42.4	99.8	118.7	At2g18210	816336	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
42.3	99.8	252.8	At1g52060	841635	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOB	O.I.	C.G.	H.G.
41.9	99.8	117.2	At1g23800	838991	ALDH2B7	Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.	O.I.	C.G.	H.G.
41.6	99.8	100.8	At5g01890	831677	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
41.2	99.8	60.0	At2g37090	818285	IRX9 (IRREGULAR XYLEM 9)	The IRX9 gene encodes a putative family 43 glycosyl transferase. It was coordinately expressed with the cellulose synthase subunits during secondary cell wall formation. Cell wall analysis revealed a decrease in the abundance of xylan in the irx9 mutant, indicating that IRX9 is required for xylan synthesis. Mutants have irregular xylem phenotype suggesting a role in secondary cell wall biosynthesis.	O.I.	C.G.	H.G.
41.1	99.8	42.7	At3g18660	821397	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)	Plants expressing an RNAi construct specifically targeting PGSIP1 was shown to have a dramatically reduced amount of starch.	O.I.	C.G.	H.G.
41.0	99.8	219.4	At4g34410	829591	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
40.8	99.8	29.1	At5g40880	834089	WD-40 repeat family protein / zfwd3 protein (ZFWD3)	F:zinc ion binding, nucleic acid binding;P:N-terminal protein myristoylation;C:cellular_component unknown;MFBOPA	O.I.	C.G.	H.G.
40.6	99.8	142.5	At4g17490	827463	ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)	Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
40.4	99.8	232.7	At1g52050	841634	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMO	O.I.	C.G.	H.G.
40.4	99.8	167.0	At1g77450	844081	anac032 (Arabidopsis NAC domain containing protein 32)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
40.2	99.8	70.2	At1g63180	842622	UGE3 (UDP-D-glucose/UDP-D-galactose 4-epimerase 3)	Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.	O.I.	C.G.	H.G.

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GSM ID	GSM184634
Assay name	Arabidopsis, root cells, 140 mM NaCl, replicate 1
GSE experiment	GSE7636: Expression analysis of the effect of protoplasting and FACS sorting in roots

Microarray experiments to specifically-expressed genes

GSM ID GSM184634 Assay name Arabidopsis, root cells, 140 mM NaCl, replicate 1 GSE experiment GSE7636: Expression analysis of the effect of protoplasting and FACS sorting in roots

GSM ID GSM184634

Assay name Arabidopsis, root cells, 140 mM NaCl, replicate 1

GSE experiment GSE7636: Expression analysis of the effect of protoplasting and FACS sorting in roots