CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184557

Assay name Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
101.6 99.9 169.1 At5g22570 832320 WRKY38 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
69.3 99.9 24.1 At2g02580 814788 CYP71B9 member of CYP71B O.I. C.G. H.G.
65.1 99.8 52.9 At5g52710 835348 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
63.9 99.8 33.4 At2g29480 817497 ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
63.3 99.8 212.9 At1g76650 843998 calcium-binding EF hand family protein F:calcium ion binding;P:response to wounding;C:plasma membrane;MPFOB O.I. C.G. H.G.
61.5 99.8 33.5 At3g61400 825312 2-oxoglutarate-dependent dioxygenase, putative 1-aminocyclopropane-1-carboxylate oxidase-like protein O.I. C.G. H.G.
60.7 99.8 361.8 At1g30510 839930 ATRFNR2 (ROOT FNR 2) Encodes a root-type ferredoxin:NADP(H) oxidoreductase. O.I. C.G. H.G.
60.3 99.8 49.9 At3g27070 822325 TOM20-1 (translocase outer membrane 20-1) Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins O.I. C.G. H.G.
59.7 99.8 121.3 At1g66500 842968 zinc finger (C2H2-type) family protein F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP O.I. C.G. H.G.
57.9 99.8 75.4 At5g41280 834129 - F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;P O.I. C.G. H.G.
56.7 99.8 43.0 At5g65140 836638 trehalose-6-phosphate phosphatase, putative F:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFA O.I. C.G. H.G.
56.5 99.8 33.7 At2g30660 817616 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative F:catalytic activity;P:metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
54.8 99.8 178.6 At2g46400 819248 WRKY46 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
54.7 99.8 69.5 At2g46510 819262 ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR) Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive. O.I. C.G. H.G.
52.4 99.8 163.8 At4g22610 828357 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
52.1 99.8 175.0 At2g22860 816817 ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR) Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor. O.I. C.G. H.G.
52.1 99.8 144.0 At2g30670 817617 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
48.8 99.8 46.6 At5g63450 836464 CYP94B1 member of CYP94B O.I. C.G. H.G.
48.4 99.8 73.3 At5g22555 832318 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
48.3 99.8 48.9 At5g48070 834859 XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20) putative xyloglucan endotransglycosylase/hydrolase, expressed primarily in the stele of mature non-elongating regions of both the main and the lateral root. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. O.I. C.G. H.G.
47.0 99.8 89.3 At4g18340 827561 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO O.I. C.G. H.G.
42.0 99.8 113.9 At1g24280 839044 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. O.I. C.G. H.G.
41.5 99.8 85.5 At5g65300 836655 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
41.1 99.8 159.4 At3g25780 822169 AOC3 (ALLENE OXIDE CYCLASE 3) Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884. O.I. C.G. H.G.
39.8 99.8 87.6 At3g27170 822336 CLC-B (CHLORIDE CHANNEL B) member of Anion channel protein family O.I. C.G. H.G.
39.7 99.8 114.9 At2g18210 816336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
39.3 99.8 42.3 At5g15830 831440 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB O.I. C.G. H.G.
38.9 99.8 22.6 At1g59730 842266 ATH7 (thioredoxin H-type 7) F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV O.I. C.G. H.G.
38.8 99.8 380.5 At1g19180 838501 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1) JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. O.I. C.G. H.G.
38.4 99.8 283.7 At3g03270 821303 universal stress protein (USP) family protein / early nodulin ENOD18 family protein F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO O.I. C.G. H.G.
37.3 99.7 142.4 At3g13650 820569 disease resistance response F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
36.8 99.7 111.2 At2g19590 816478 ACO1 (ACC OXIDASE 1) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
36.6 99.7 259.0 At4g39675 830122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
35.1 99.7 50.5 At4g13290 826959 CYP71A19 putative cytochrome P450 O.I. C.G. H.G.
34.9 99.7 100.3 At1g29020 839776 calcium-binding EF hand family protein F:calcium ion binding;P:unknown;C:endomembrane system;PMOAF O.I. C.G. H.G.
34.2 99.7 196.3 At3g23030 821877 IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2) auxin inducible gene expressed in the nucleus O.I. C.G. H.G.
34.2 99.7 11.8 At5g49620 835024 AtMYB78 (myb domain protein 78) Member of the R2R3 factor gene family. O.I. C.G. H.G.
33.5 99.7 17.6 At4g19980 827742 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
33.5 99.7 15.2 At5g52680 835345 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV O.I. C.G. H.G.
33.1 99.7 220.4 At1g74950 843834 TIFY10B F:molecular_function unknown;P:response to jasmonic acid stimulus, response to wounding;C:cellular_component unknown;P O.I. C.G. H.G.
32.9 99.7 188.3 At3g43190 823393 SUS4 Encodes a protein with sucrose synthase activity (SUS4). O.I. C.G. H.G.
31.3 99.7 61.0 At3g53600 824528 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMF O.I. C.G. H.G.
31.2 99.7 37.0 At1g12610 837817 DDF1 (DWARF AND DELAYED FLOWERING 1) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. O.I. C.G. H.G.
30.5 99.7 365.1 At2g16060 816103 AHB1 (ARABIDOPSIS HEMOGLOBIN 1) Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. O.I. C.G. H.G.
30.4 99.7 49.3 At5g04080 830287 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF O.I. C.G. H.G.
29.9 99.7 66.7 At1g67920 843120 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
29.4 99.7 91.6 At5g62520 836372 SRO5 (SIMILAR TO RCD ONE 5) Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response. O.I. C.G. H.G.
29.4 99.7 27.0 At1g19025 838484 DNA cross-link repair protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA O.I. C.G. H.G.
29.3 99.7 74.2 At1g61820 842479 BGLU46 (BETA GLUCOSIDASE 46) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
28.7 99.7 96.0 At1g20823 838674 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV O.I. C.G. H.G.
28.3 99.7 43.5 At5g10210 830885 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.3 99.7 30.6 At3g13090 820497 ATMRP8 member of MRP subfamily O.I. C.G. H.G.
27.2 99.7 21.7 At1g55780 842027 metal ion binding F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
27.1 99.7 95.6 At2g01150 814644 RHA2B (RING-H2 FINGER PROTEIN 2B) Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils. O.I. C.G. H.G.
27.0 99.7 130.6 At4g27652 828877 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
26.8 99.7 14.1 At2g01430 814671 ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17) F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOV O.I. C.G. H.G.
26.4 99.7 101.9 At3g10930 820264 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
25.7 99.7 427.5 At2g27510 817297 ATFD3 (ferredoxin 3) F:electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding;P:electron transport chain;C:chloroplast;BOPAMFV O.I. C.G. H.G.
25.7 99.7 14.7 At4g22620 828358 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
25.5 99.7 54.1 At4g08780 826448 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFM O.I. C.G. H.G.
25.4 99.6 21.9 At5g01380 831895 transcription factor F:transcription factor activity;P:regulation of transcription;C:unknown;MOFPBVA O.I. C.G. H.G.
25.0 99.6 34.7 At2g47950 819407 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
24.9 99.6 36.1 At2g34140 817975 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO O.I. C.G. H.G.
24.8 99.6 27.7 At5g52670 835344 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
24.6 99.6 17.8 At5g52020 835277 AP2 domain-containing protein encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
24.1 99.6 18.2 At1g79310 844269 AtMC7 (metacaspase 7) F:cysteine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;BFOPA O.I. C.G. H.G.
23.8 99.6 126.1 At4g08770 826447 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POF O.I. C.G. H.G.
23.8 99.6 51.5 At3g20340 821578 - Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. O.I. C.G. H.G.
23.8 99.6 35.0 At5g40540 834052 protein kinase, putative F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
23.7 99.6 38.6 At1g66400 842958 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBV O.I. C.G. H.G.
23.3 99.6 68.3 At1g72360 843568 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.
22.9 99.6 88.8 At5g12340 831109 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
22.7 99.6 14.0 At5g22550 832317 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
22.6 99.6 55.6 At4g33560 829495 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
22.6 99.6 9.9 At5g52870 835364 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
22.5 99.6 51.5 At4g19750 827719 glycosyl hydrolase family 18 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA O.I. C.G. H.G.
22.2 99.6 610.0 At1g77120 844047 ADH1 (ALCOHOL DEHYDROGENASE 1) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. O.I. C.G. H.G.
21.9 99.6 336.1 At1g27730 839666 STZ (salt tolerance zinc finger) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. O.I. C.G. H.G.
21.7 99.6 65.6 At5g37690 833748 GDSL-motif lipase/hydrolase family protein F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
21.5 99.6 217.2 At3g14940 820723 ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3) One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques. O.I. C.G. H.G.
21.2 99.6 92.0 At1g61340 842428 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
21.2 99.6 42.9 At4g13235 826940 EDA21 (embryo sac development arrest 21) Encodes a defensin-like (DEFL) family protein. O.I. C.G. H.G.
21.0 99.6 117.4 At4g05390 825887 ATRFNR1 (ROOT FNR 1) Encodes a root-type ferredoxin:NADP(H) oxidoreductase. O.I. C.G. H.G.
21.0 99.6 110.1 At1g74930 843832 ORA47 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
20.9 99.6 20.4 At2g22850 816816 AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMF O.I. C.G. H.G.
20.7 99.6 223.7 At1g80840 844423 WRKY40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. O.I. C.G. H.G.
20.7 99.6 10.8 At1g42980 840896 formin homology 2 domain-containing protein / FH2 domain-containing protein F:actin binding;P:unknown;C:endomembrane system;MPOF O.I. C.G. H.G.
20.1 99.6 29.1 At5g28610 832960 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB O.I. C.G. H.G.
20.0 99.6 128.0 At5g10580 830923 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO O.I. C.G. H.G.
20.0 99.6 86.8 At4g10500 826642 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM O.I. C.G. H.G.
20.0 99.6 38.8 At1g64160 842720 disease resistance-responsive family protein / dirigent family protein F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
19.9 99.6 77.9 At3g29970 822700 germination protein-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
19.3 99.6 77.8 At1g19210 838504 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
19.0 99.5 87.5 At2g29440 817493 ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
18.9 99.5 43.0 At3g12230 820403 scpl14 (serine carboxypeptidase-like 14) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
18.7 99.5 51.1 At5g50800 835152 nodulin MtN3 family protein F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO O.I. C.G. H.G.
18.3 99.5 6.5 At2g35870 - - O.I. C.G. H.G.
18.1 99.5 93.4 At3g23190 821897 lesion inducing protein-related F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;P O.I. C.G. H.G.
18.0 99.5 105.3 At1g15010 838066 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PB O.I. C.G. H.G.
18.0 99.5 46.4 At1g59171 842233 ATP binding / inositol pentakisphosphate 2-kinase F:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
101.6	99.9	169.1	At5g22570	832320	WRKY38	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
69.3	99.9	24.1	At2g02580	814788	CYP71B9	member of CYP71B	O.I.	C.G.	H.G.
65.1	99.8	52.9	At5g52710	835348	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
63.9	99.8	33.4	At2g29480	817497	ATGSTU2 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 2)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
63.3	99.8	212.9	At1g76650	843998	calcium-binding EF hand family protein	F:calcium ion binding;P:response to wounding;C:plasma membrane;MPFOB	O.I.	C.G.	H.G.
61.5	99.8	33.5	At3g61400	825312	2-oxoglutarate-dependent dioxygenase, putative	1-aminocyclopropane-1-carboxylate oxidase-like protein	O.I.	C.G.	H.G.
60.7	99.8	361.8	At1g30510	839930	ATRFNR2 (ROOT FNR 2)	Encodes a root-type ferredoxin:NADP(H) oxidoreductase.	O.I.	C.G.	H.G.
60.3	99.8	49.9	At3g27070	822325	TOM20-1 (translocase outer membrane 20-1)	Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins	O.I.	C.G.	H.G.
59.7	99.8	121.3	At1g66500	842968	zinc finger (C2H2-type) family protein	F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP	O.I.	C.G.	H.G.
57.9	99.8	75.4	At5g41280	834129	-	F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;P	O.I.	C.G.	H.G.
56.7	99.8	43.0	At5g65140	836638	trehalose-6-phosphate phosphatase, putative	F:catalytic activity, trehalose-phosphatase activity;P:response to cadmium ion, trehalose biosynthetic process;C:unknown;BPMOFA	O.I.	C.G.	H.G.
56.5	99.8	33.7	At2g30660	817616	3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative	F:catalytic activity;P:metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
54.8	99.8	178.6	At2g46400	819248	WRKY46	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
54.7	99.8	69.5	At2g46510	819262	ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR)	Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.	O.I.	C.G.	H.G.
52.4	99.8	163.8	At4g22610	828357	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
52.1	99.8	175.0	At2g22860	816817	ATPSK2 (PHYTOSULFOKINE 2 PRECURSOR)	Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.	O.I.	C.G.	H.G.
52.1	99.8	144.0	At2g30670	817617	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
48.8	99.8	46.6	At5g63450	836464	CYP94B1	member of CYP94B	O.I.	C.G.	H.G.
48.4	99.8	73.3	At5g22555	832318	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
48.3	99.8	48.9	At5g48070	834859	XTH20 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 20)	putative xyloglucan endotransglycosylase/hydrolase, expressed primarily in the stele of mature non-elongating regions of both the main and the lateral root. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow.	O.I.	C.G.	H.G.
47.0	99.8	89.3	At4g18340	827561	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PFO	O.I.	C.G.	H.G.
42.0	99.8	113.9	At1g24280	839044	G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)	Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.	O.I.	C.G.	H.G.
41.5	99.8	85.5	At5g65300	836655	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
41.1	99.8	159.4	At3g25780	822169	AOC3 (ALLENE OXIDE CYCLASE 3)	Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.	O.I.	C.G.	H.G.
39.8	99.8	87.6	At3g27170	822336	CLC-B (CHLORIDE CHANNEL B)	member of Anion channel protein family	O.I.	C.G.	H.G.
39.7	99.8	114.9	At2g18210	816336	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
39.3	99.8	42.3	At5g15830	831440	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMFB	O.I.	C.G.	H.G.
38.9	99.8	22.6	At1g59730	842266	ATH7 (thioredoxin H-type 7)	F:unknown;P:N-terminal protein myristoylation, cell redox homeostasis;C:cellular_component unknown;BOMPFAV	O.I.	C.G.	H.G.
38.8	99.8	380.5	At1g19180	838501	JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1)	JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.	O.I.	C.G.	H.G.
38.4	99.8	283.7	At3g03270	821303	universal stress protein (USP) family protein / early nodulin ENOD18 family protein	F:unknown;P:response to stress;C:plasma membrane, membrane;PFMBO	O.I.	C.G.	H.G.
37.3	99.7	142.4	At3g13650	820569	disease resistance response	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
36.8	99.7	111.2	At2g19590	816478	ACO1 (ACC OXIDASE 1)	encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
36.6	99.7	259.0	At4g39675	830122	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
35.1	99.7	50.5	At4g13290	826959	CYP71A19	putative cytochrome P450	O.I.	C.G.	H.G.
34.9	99.7	100.3	At1g29020	839776	calcium-binding EF hand family protein	F:calcium ion binding;P:unknown;C:endomembrane system;PMOAF	O.I.	C.G.	H.G.
34.2	99.7	196.3	At3g23030	821877	IAA2 (INDOLE-3-ACETIC ACID INDUCIBLE 2)	auxin inducible gene expressed in the nucleus	O.I.	C.G.	H.G.
34.2	99.7	11.8	At5g49620	835024	AtMYB78 (myb domain protein 78)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
33.5	99.7	17.6	At4g19980	827742	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
33.5	99.7	15.2	At5g52680	835345	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV	O.I.	C.G.	H.G.
33.1	99.7	220.4	At1g74950	843834	TIFY10B	F:molecular_function unknown;P:response to jasmonic acid stimulus, response to wounding;C:cellular_component unknown;P	O.I.	C.G.	H.G.
32.9	99.7	188.3	At3g43190	823393	SUS4	Encodes a protein with sucrose synthase activity (SUS4).	O.I.	C.G.	H.G.
31.3	99.7	61.0	At3g53600	824528	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMF	O.I.	C.G.	H.G.
31.2	99.7	37.0	At1g12610	837817	DDF1 (DWARF AND DELAYED FLOWERING 1)	Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.	O.I.	C.G.	H.G.
30.5	99.7	365.1	At2g16060	816103	AHB1 (ARABIDOPSIS HEMOGLOBIN 1)	Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen.	O.I.	C.G.	H.G.
30.4	99.7	49.3	At5g04080	830287	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF	O.I.	C.G.	H.G.
29.9	99.7	66.7	At1g67920	843120	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
29.4	99.7	91.6	At5g62520	836372	SRO5 (SIMILAR TO RCD ONE 5)	Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.	O.I.	C.G.	H.G.
29.4	99.7	27.0	At1g19025	838484	DNA cross-link repair protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA	O.I.	C.G.	H.G.
29.3	99.7	74.2	At1g61820	842479	BGLU46 (BETA GLUCOSIDASE 46)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
28.7	99.7	96.0	At1g20823	838674	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV	O.I.	C.G.	H.G.
28.3	99.7	43.5	At5g10210	830885	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.3	99.7	30.6	At3g13090	820497	ATMRP8	member of MRP subfamily	O.I.	C.G.	H.G.
27.2	99.7	21.7	At1g55780	842027	metal ion binding	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
27.1	99.7	95.6	At2g01150	814644	RHA2B (RING-H2 FINGER PROTEIN 2B)	Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils.	O.I.	C.G.	H.G.
27.0	99.7	130.6	At4g27652	828877	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
26.8	99.7	14.1	At2g01430	814671	ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17)	F:transcription factor activity;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOV	O.I.	C.G.	H.G.
26.4	99.7	101.9	At3g10930	820264	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
25.7	99.7	427.5	At2g27510	817297	ATFD3 (ferredoxin 3)	F:electron carrier activity, iron-sulfur cluster binding, 2 iron, 2 sulfur cluster binding;P:electron transport chain;C:chloroplast;BOPAMFV	O.I.	C.G.	H.G.
25.7	99.7	14.7	At4g22620	828358	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
25.5	99.7	54.1	At4g08780	826448	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POFM	O.I.	C.G.	H.G.
25.4	99.6	21.9	At5g01380	831895	transcription factor	F:transcription factor activity;P:regulation of transcription;C:unknown;MOFPBVA	O.I.	C.G.	H.G.
25.0	99.6	34.7	At2g47950	819407	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
24.9	99.6	36.1	At2g34140	817975	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
24.8	99.6	27.7	At5g52670	835344	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
24.6	99.6	17.8	At5g52020	835277	AP2 domain-containing protein	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
24.1	99.6	18.2	At1g79310	844269	AtMC7 (metacaspase 7)	F:cysteine-type endopeptidase activity;P:proteolysis;C:cellular_component unknown;BFOPA	O.I.	C.G.	H.G.
23.8	99.6	126.1	At4g08770	826447	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:vacuole;POF	O.I.	C.G.	H.G.
23.8	99.6	51.5	At3g20340	821578	-	Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.	O.I.	C.G.	H.G.
23.8	99.6	35.0	At5g40540	834052	protein kinase, putative	F:protein serine/threonine/tyrosine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
23.7	99.6	38.6	At1g66400	842958	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MFPOBV	O.I.	C.G.	H.G.
23.3	99.6	68.3	At1g72360	843568	ethylene-responsive element-binding protein, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.
22.9	99.6	88.8	At5g12340	831109	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
22.7	99.6	14.0	At5g22550	832317	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
22.6	99.6	55.6	At4g33560	829495	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
22.6	99.6	9.9	At5g52870	835364	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
22.5	99.6	51.5	At4g19750	827719	glycosyl hydrolase family 18 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, chitinase activity, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA	O.I.	C.G.	H.G.
22.2	99.6	610.0	At1g77120	844047	ADH1 (ALCOHOL DEHYDROGENASE 1)	Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.	O.I.	C.G.	H.G.
21.9	99.6	336.1	At1g27730	839666	STZ (salt tolerance zinc finger)	Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.	O.I.	C.G.	H.G.
21.7	99.6	65.6	At5g37690	833748	GDSL-motif lipase/hydrolase family protein	F:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
21.5	99.6	217.2	At3g14940	820723	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques.	O.I.	C.G.	H.G.
21.2	99.6	92.0	At1g61340	842428	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
21.2	99.6	42.9	At4g13235	826940	EDA21 (embryo sac development arrest 21)	Encodes a defensin-like (DEFL) family protein.	O.I.	C.G.	H.G.
21.0	99.6	117.4	At4g05390	825887	ATRFNR1 (ROOT FNR 1)	Encodes a root-type ferredoxin:NADP(H) oxidoreductase.	O.I.	C.G.	H.G.
21.0	99.6	110.1	At1g74930	843832	ORA47	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
20.9	99.6	20.4	At2g22850	816816	AtbZIP6 (Arabidopsis thaliana basic leucine-zipper 6)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POMF	O.I.	C.G.	H.G.
20.7	99.6	223.7	At1g80840	844423	WRKY40	Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.	O.I.	C.G.	H.G.
20.7	99.6	10.8	At1g42980	840896	formin homology 2 domain-containing protein / FH2 domain-containing protein	F:actin binding;P:unknown;C:endomembrane system;MPOF	O.I.	C.G.	H.G.
20.1	99.6	29.1	At5g28610	832960	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB	O.I.	C.G.	H.G.
20.0	99.6	128.0	At5g10580	830923	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BPO	O.I.	C.G.	H.G.
20.0	99.6	86.8	At4g10500	826642	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM	O.I.	C.G.	H.G.
20.0	99.6	38.8	At1g64160	842720	disease resistance-responsive family protein / dirigent family protein	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
19.9	99.6	77.9	At3g29970	822700	germination protein-related	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
19.3	99.6	77.8	At1g19210	838504	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
19.0	99.5	87.5	At2g29440	817493	ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
18.9	99.5	43.0	At3g12230	820403	scpl14 (serine carboxypeptidase-like 14)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
18.7	99.5	51.1	At5g50800	835152	nodulin MtN3 family protein	F:unknown;P:unknown;C:endomembrane system, integral to membrane, membrane;PMO	O.I.	C.G.	H.G.
18.3	99.5	6.5	At2g35870		-	-	O.I.	C.G.	H.G.
18.1	99.5	93.4	At3g23190	821897	lesion inducing protein-related	F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;P	O.I.	C.G.	H.G.
18.0	99.5	105.3	At1g15010	838066	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PB	O.I.	C.G.	H.G.
18.0	99.5	46.4	At1g59171	842233	ATP binding / inositol pentakisphosphate 2-kinase	F:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.

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GSM ID	GSM184557
Assay name	Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3
GSE experiment	GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Microarray experiments to specifically-expressed genes

GSM ID GSM184557 Assay name Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3 GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

GSM ID GSM184557

Assay name Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep3

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root