CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184520

Assay name Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
694.8 100.0 69.1 At5g52680 835345 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV O.I. C.G. H.G.
495.2 100.0 110.9 At1g19025 838484 DNA cross-link repair protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA O.I. C.G. H.G.
411.3 100.0 63.0 At1g26970 839588 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
402.3 100.0 337.8 At1g35910 840493 trehalose-6-phosphate phosphatase, putative F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA O.I. C.G. H.G.
357.1 100.0 132.0 At5g38540 833842 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
300.9 100.0 372.2 At3g28510 822481 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV O.I. C.G. H.G.
272.2 100.0 91.6 At5g52670 835344 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
243.8 100.0 105.8 At3g28580 822488 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to abscisic acid stimulus;C:endoplasmic reticulum;OMBFPAV O.I. C.G. H.G.
219.4 100.0 97.0 At5g52710 835348 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
206.7 100.0 34.1 At3g53160 824482 UGT73C7 (UDP-glucosyl transferase 73C7) F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
201.3 100.0 176.0 At5g14760 831328 AO (L-ASPARTATE OXIDASE) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 O.I. C.G. H.G.
190.5 100.0 79.3 At3g13090 820497 ATMRP8 member of MRP subfamily O.I. C.G. H.G.
189.8 100.0 115.7 At3g48920 824053 AtMYB45 (myb domain protein 45) Member of the R2R3 factor gene family. O.I. C.G. H.G.
183.7 100.0 277.8 At3g02840 821225 immediate-early fungal elicitor family protein F:binding;P:response to other organism, response to ozone;C:unknown;PO O.I. C.G. H.G.
183.6 100.0 72.6 At5g59930 836115 DC1 domain-containing protein / UV-B light-insensitive protein, putative F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POMF O.I. C.G. H.G.
181.7 100.0 188.0 At5g20110 832133 dynein light chain, putative F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF O.I. C.G. H.G.
176.2 100.0 106.8 At3g18710 821402 PUB29 (PLANT U-BOX 29) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
164.4 100.0 400.9 At2g47550 819368 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
162.4 99.9 87.2 At1g56660 842121 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA O.I. C.G. H.G.
161.9 99.9 360.7 At5g59730 836094 ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7) A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. O.I. C.G. H.G.
151.0 99.9 219.9 At5g27920 832858 F-box family protein F:ubiquitin-protein ligase activity;P:biological_process unknown;C:cellular_component unknown;MPOFBV O.I. C.G. H.G.
148.5 99.9 70.1 At5g48175 834870 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
146.9 99.9 324.3 At1g76650 843998 calcium-binding EF hand family protein F:calcium ion binding;P:response to wounding;C:plasma membrane;MPFOB O.I. C.G. H.G.
146.6 99.9 79.8 At5g54040 835487 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOF O.I. C.G. H.G.
146.0 99.9 132.1 At1g59171 842233 ATP binding / inositol pentakisphosphate 2-kinase F:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
142.7 99.9 42.1 At1g64920 842800 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO O.I. C.G. H.G.
142.2 99.9 126.3 At3g03910 821072 GDH3 (GLUTAMATE DEHYDROGENASE 3) GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development. O.I. C.G. H.G.
137.6 99.9 7.6 At3g28380 822467 PGP17 (P-GLYCOPROTEIN 17) F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
130.8 99.9 36.8 At2g04680 815011 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF O.I. C.G. H.G.
130.3 99.9 132.7 At1g55120 841955 ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity. O.I. C.G. H.G.
129.6 99.9 47.8 At1g64910 842799 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOF O.I. C.G. H.G.
126.9 99.9 224.7 At2g30670 817617 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
121.2 99.9 70.7 At1g24320 839048 alpha-glucosidase, putative F:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPA O.I. C.G. H.G.
119.8 99.9 193.9 At1g19210 838504 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
118.9 99.9 96.1 At4g14580 827106 CIPK4 (CBL-interacting protein kinase 4) CBL-interacting protein kinase O.I. C.G. H.G.
118.0 99.9 52.5 At4g18250 827551 receptor serine/threonine kinase, putative F:transmembrane receptor protein serine/threonine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
116.0 99.9 69.5 At5g15130 831365 WRKY72 member of WRKY Transcription Factor; Group II-b O.I. C.G. H.G.
115.6 99.9 61.1 At3g07600 819951 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBMFV O.I. C.G. H.G.
106.8 99.9 193.7 At3g52450 824410 PUB22 (PLANT U-BOX 22) Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. O.I. C.G. H.G.
104.7 99.9 265.6 At1g43910 840990 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
102.9 99.9 161.5 At5g67080 836843 MAPKKK19 member of MEKK subfamily O.I. C.G. H.G.
101.4 99.9 51.7 At5g06740 830563 lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
99.0 99.9 242.1 At2g30040 817555 MAPKKK14 member of MEKK subfamily O.I. C.G. H.G.
97.5 99.9 31.6 At1g61550 842449 S-locus protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
96.6 99.9 55.3 At3g47040 823857 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAM O.I. C.G. H.G.
96.4 99.9 194.7 At3g10930 820264 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
96.0 99.9 60.5 At2g35710 818140 glycogenin glucosyltransferase (glycogenin)-related F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBV O.I. C.G. H.G.
94.3 99.9 32.6 At5g43690 834389 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
94.2 99.9 75.7 At5g64000 836521 SAL2 3'(2'),5'-bisphosphate nucleotidase O.I. C.G. H.G.
93.9 99.9 563.5 At5g05410 830424 DREB2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes. O.I. C.G. H.G.
93.2 99.9 45.5 At5g60770 836198 ATNRT2.4 member of High affinity nitrate transporter family O.I. C.G. H.G.
93.0 99.9 17.7 At1g64820 842790 MATE efflux family protein F:antiporter activity, drug transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
92.9 99.9 169.8 At3g62260 825399 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA O.I. C.G. H.G.
92.2 99.9 61.9 At3g45650 823707 NAXT1 (NITRATE EXCRETION TRANSPORTER1) Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots. O.I. C.G. H.G.
89.9 99.9 114.3 At4g25390 828642 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA O.I. C.G. H.G.
89.9 99.9 46.8 At1g63750 842679 ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding F:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVA O.I. C.G. H.G.
89.8 99.9 35.0 At1g68040 843132 S-adenosyl-L-methionine:carboxyl methyltransferase family protein F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF O.I. C.G. H.G.
89.3 99.9 93.4 At3g12230 820403 scpl14 (serine carboxypeptidase-like 14) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
88.3 99.9 96.8 At1g19250 838508 FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1) FMO1 is required for full expression of TIR-NB-LRR�conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. O.I. C.G. H.G.
87.9 99.9 164.9 At1g24280 839044 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3) Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. O.I. C.G. H.G.
87.4 99.9 72.5 At5g64890 836612 PROPEP2 (Elicitor peptide 2 precursor) F:molecular_function unknown;P:response to jasmonic acid stimulus, defense response, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;P O.I. C.G. H.G.
86.6 99.9 414.5 At1g01720 839265 ATAF1 Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. O.I. C.G. H.G.
84.5 99.9 113.3 At1g51420 841567 SPP1 (SUCROSE-PHOSPHATASE 1) F:phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity;P:sucrose biosynthetic process, metabolic process;C:plasma membrane;BPO O.I. C.G. H.G.
84.3 99.9 314.8 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
83.7 99.9 178.0 At2g01180 814646 ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1) Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves. O.I. C.G. H.G.
83.6 99.9 128.7 At5g11920 831065 AtcwINV6 (6-&1-fructan exohydrolase) Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity. O.I. C.G. H.G.
83.0 99.9 119.4 At2g41010 818701 ATCAMBP25 (ARABIDOPSIS THALIANA CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA) Encodes a novel calmodulin binding protein whose gene expression is induced by dehydration and ionic (salt) and non-ionic (mannitol) osmotic stress. Lines over-expressing this gene are more sensitive and anti-sense lines are more tolerant to osmotic stress, suggesting this gene may be a negative regulator of response to osmotic stress. O.I. C.G. H.G.
82.7 99.9 46.9 At3g25790 822170 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POM O.I. C.G. H.G.
82.1 99.9 35.9 At2g04500 814991 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;POM O.I. C.G. H.G.
82.1 99.9 35.3 At5g58750 835989 wound-responsive protein-related F:binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BPFO O.I. C.G. H.G.
81.3 99.9 77.3 At5g24410 832512 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
81.0 99.9 44.0 At1g13430 837903 ST4C (SULFOTRANSFERASE 4C) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. O.I. C.G. H.G.
80.9 99.9 63.2 At5g66310 836763 kinesin motor family protein F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVA O.I. C.G. H.G.
80.8 99.9 38.4 At3g61400 825312 2-oxoglutarate-dependent dioxygenase, putative 1-aminocyclopropane-1-carboxylate oxidase-like protein O.I. C.G. H.G.
80.5 99.9 77.9 At3g47210 823874 unknown protein F:unknown;P:biological_process unknown;C:plasma membrane;PM O.I. C.G. H.G.
80.4 99.9 175.1 At2g05050 3767735 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
78.9 99.9 317.2 At4g24160 828516 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOMFPA O.I. C.G. H.G.
77.3 99.9 107.6 At2g48010 819413 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) receptor-like serine/threonine kinase (RKF3) O.I. C.G. H.G.
76.6 99.9 39.6 At5g40010 833998 AATP1 (AAA-ATPase 1) F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV O.I. C.G. H.G.
76.2 99.9 233.3 At3g09940 820155 MDHAR (MONODEHYDROASCORBATE REDUCTASE) Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica. O.I. C.G. H.G.
75.9 99.9 45.1 At1g03905 839376 ABC transporter family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOAMFPV O.I. C.G. H.G.
74.3 99.9 144.9 At3g25250 822119 AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1) Arabidopsis protein kinase O.I. C.G. H.G.
73.2 99.9 225.3 At3g61190 825291 BAP1 (BON ASSOCIATION PROTEIN 1) Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis. O.I. C.G. H.G.
73.2 99.9 20.3 At3g55700 824736 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
72.9 99.9 54.9 At3g27070 822325 TOM20-1 (translocase outer membrane 20-1) Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins O.I. C.G. H.G.
72.3 99.9 14.1 At4g27290 828837 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding F:sugar binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
72.1 99.9 424.7 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF O.I. C.G. H.G.
71.7 99.9 213.1 At1g74450 843786 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
71.6 99.9 260.6 At5g45110 834545 NPR3 (NPR1-LIKE PROTEIN 3) Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. O.I. C.G. H.G.
70.7 99.9 169.6 At2g24600 816996 ankyrin repeat family protein F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA O.I. C.G. H.G.
70.6 99.9 69.0 At5g67340 836869 armadillo/beta-catenin repeat family protein / U-box domain-containing protein F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;PMOFB O.I. C.G. H.G.
70.0 99.9 39.5 At2g25460 817084 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
69.7 99.9 26.4 At3g11390 820311 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBV O.I. C.G. H.G.
69.3 99.9 232.3 At4g17500 827464 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
67.1 99.8 552.3 At5g59820 836103 RHL41 (RESPONSIVE TO HIGH LIGHT 41) Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. O.I. C.G. H.G.
66.3 99.8 189.5 At1g11670 837711 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
65.9 99.8 40.5 At3g11370 820309 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFOM O.I. C.G. H.G.
65.5 99.8 36.9 At5g54020 835485 zinc ion binding F:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOF O.I. C.G. H.G.
65.5 99.8 31.7 At3g60470 825218 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
64.9 99.8 310.0 At1g05575 837061 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
694.8	100.0	69.1	At5g52680	835345	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV	O.I.	C.G.	H.G.
495.2	100.0	110.9	At1g19025	838484	DNA cross-link repair protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA	O.I.	C.G.	H.G.
411.3	100.0	63.0	At1g26970	839588	protein kinase, putative	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
402.3	100.0	337.8	At1g35910	840493	trehalose-6-phosphate phosphatase, putative	F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA	O.I.	C.G.	H.G.
357.1	100.0	132.0	At5g38540	833842	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
300.9	100.0	372.2	At3g28510	822481	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV	O.I.	C.G.	H.G.
272.2	100.0	91.6	At5g52670	835344	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
243.8	100.0	105.8	At3g28580	822488	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to abscisic acid stimulus;C:endoplasmic reticulum;OMBFPAV	O.I.	C.G.	H.G.
219.4	100.0	97.0	At5g52710	835348	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
206.7	100.0	34.1	At3g53160	824482	UGT73C7 (UDP-glucosyl transferase 73C7)	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to other organism;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
201.3	100.0	176.0	At5g14760	831328	AO (L-ASPARTATE OXIDASE)	At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2	O.I.	C.G.	H.G.
190.5	100.0	79.3	At3g13090	820497	ATMRP8	member of MRP subfamily	O.I.	C.G.	H.G.
189.8	100.0	115.7	At3g48920	824053	AtMYB45 (myb domain protein 45)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
183.7	100.0	277.8	At3g02840	821225	immediate-early fungal elicitor family protein	F:binding;P:response to other organism, response to ozone;C:unknown;PO	O.I.	C.G.	H.G.
183.6	100.0	72.6	At5g59930	836115	DC1 domain-containing protein / UV-B light-insensitive protein, putative	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POMF	O.I.	C.G.	H.G.
181.7	100.0	188.0	At5g20110	832133	dynein light chain, putative	F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF	O.I.	C.G.	H.G.
176.2	100.0	106.8	At3g18710	821402	PUB29 (PLANT U-BOX 29)	Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
164.4	100.0	400.9	At2g47550	819368	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
162.4	99.9	87.2	At1g56660	842121	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA	O.I.	C.G.	H.G.
161.9	99.9	360.7	At5g59730	836094	ATEXO70H7 (EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7)	A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.	O.I.	C.G.	H.G.
151.0	99.9	219.9	At5g27920	832858	F-box family protein	F:ubiquitin-protein ligase activity;P:biological_process unknown;C:cellular_component unknown;MPOFBV	O.I.	C.G.	H.G.
148.5	99.9	70.1	At5g48175	834870	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
146.9	99.9	324.3	At1g76650	843998	calcium-binding EF hand family protein	F:calcium ion binding;P:response to wounding;C:plasma membrane;MPFOB	O.I.	C.G.	H.G.
146.6	99.9	79.8	At5g54040	835487	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
146.0	99.9	132.1	At1g59171	842233	ATP binding / inositol pentakisphosphate 2-kinase	F:inositol pentakisphosphate 2-kinase activity, ATP binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
142.7	99.9	42.1	At1g64920	842800	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO	O.I.	C.G.	H.G.
142.2	99.9	126.3	At3g03910	821072	GDH3 (GLUTAMATE DEHYDROGENASE 3)	GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development.	O.I.	C.G.	H.G.
137.6	99.9	7.6	At3g28380	822467	PGP17 (P-GLYCOPROTEIN 17)	F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
130.8	99.9	36.8	At2g04680	815011	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
130.3	99.9	132.7	At1g55120	841955	ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)	Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.	O.I.	C.G.	H.G.
129.6	99.9	47.8	At1g64910	842799	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOF	O.I.	C.G.	H.G.
126.9	99.9	224.7	At2g30670	817617	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
121.2	99.9	70.7	At1g24320	839048	alpha-glucosidase, putative	F:mannosyl-oligosaccharide glucosidase activity, alpha-glucosidase activity, catalytic activity;P:oligosaccharide metabolic process;C:cellular_component unknown;MFOBPA	O.I.	C.G.	H.G.
119.8	99.9	193.9	At1g19210	838504	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
118.9	99.9	96.1	At4g14580	827106	CIPK4 (CBL-interacting protein kinase 4)	CBL-interacting protein kinase	O.I.	C.G.	H.G.
118.0	99.9	52.5	At4g18250	827551	receptor serine/threonine kinase, putative	F:transmembrane receptor protein serine/threonine kinase activity, kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
116.0	99.9	69.5	At5g15130	831365	WRKY72	member of WRKY Transcription Factor; Group II-b	O.I.	C.G.	H.G.
115.6	99.9	61.1	At3g07600	819951	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBMFV	O.I.	C.G.	H.G.
106.8	99.9	193.7	At3g52450	824410	PUB22 (PLANT U-BOX 22)	Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	H.G.
104.7	99.9	265.6	At1g43910	840990	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
102.9	99.9	161.5	At5g67080	836843	MAPKKK19	member of MEKK subfamily	O.I.	C.G.	H.G.
101.4	99.9	51.7	At5g06740	830563	lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
99.0	99.9	242.1	At2g30040	817555	MAPKKK14	member of MEKK subfamily	O.I.	C.G.	H.G.
97.5	99.9	31.6	At1g61550	842449	S-locus protein kinase, putative	F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
96.6	99.9	55.3	At3g47040	823857	glycosyl hydrolase family 3 protein	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cellular_component unknown;BOFPAM	O.I.	C.G.	H.G.
96.4	99.9	194.7	At3g10930	820264	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
96.0	99.9	60.5	At2g35710	818140	glycogenin glucosyltransferase (glycogenin)-related	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process, biosynthetic process;C:endomembrane system;PMFOBV	O.I.	C.G.	H.G.
94.3	99.9	32.6	At5g43690	834389	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
94.2	99.9	75.7	At5g64000	836521	SAL2	3'(2'),5'-bisphosphate nucleotidase	O.I.	C.G.	H.G.
93.9	99.9	563.5	At5g05410	830424	DREB2A	Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes.	O.I.	C.G.	H.G.
93.2	99.9	45.5	At5g60770	836198	ATNRT2.4	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
93.0	99.9	17.7	At1g64820	842790	MATE efflux family protein	F:antiporter activity, drug transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
92.9	99.9	169.8	At3g62260	825399	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA	O.I.	C.G.	H.G.
92.2	99.9	61.9	At3g45650	823707	NAXT1 (NITRATE EXCRETION TRANSPORTER1)	Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots.	O.I.	C.G.	H.G.
89.9	99.9	114.3	At4g25390	828642	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA	O.I.	C.G.	H.G.
89.9	99.9	46.8	At1g63750	842679	ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein binding	F:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVA	O.I.	C.G.	H.G.
89.8	99.9	35.0	At1g68040	843132	S-adenosyl-L-methionine:carboxyl methyltransferase family protein	F:S-adenosylmethionine-dependent methyltransferase activity, methyltransferase activity;P:biological_process unknown;C:cellular_component unknown;POBMF	O.I.	C.G.	H.G.
89.3	99.9	93.4	At3g12230	820403	scpl14 (serine carboxypeptidase-like 14)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
88.3	99.9	96.8	At1g19250	838508	FMO1 (FLAVIN-DEPENDENT MONOOXYGENASE 1)	FMO1 is required for full expression of TIR-NB-LRR�conditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites.	O.I.	C.G.	H.G.
87.9	99.9	164.9	At1g24280	839044	G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3)	Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.	O.I.	C.G.	H.G.
87.4	99.9	72.5	At5g64890	836612	PROPEP2 (Elicitor peptide 2 precursor)	F:molecular_function unknown;P:response to jasmonic acid stimulus, defense response, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;P	O.I.	C.G.	H.G.
86.6	99.9	414.5	At1g01720	839265	ATAF1	Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.	O.I.	C.G.	H.G.
84.5	99.9	113.3	At1g51420	841567	SPP1 (SUCROSE-PHOSPHATASE 1)	F:phosphatase activity, magnesium ion binding, sucrose-phosphatase activity, catalytic activity;P:sucrose biosynthetic process, metabolic process;C:plasma membrane;BPO	O.I.	C.G.	H.G.
84.3	99.9	314.8	At4g34410	829591	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
83.7	99.9	178.0	At2g01180	814646	ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)	Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves.	O.I.	C.G.	H.G.
83.6	99.9	128.7	At5g11920	831065	AtcwINV6 (6-&1-fructan exohydrolase)	Encodes a protein with fructan exohydrolase (FEH) activity acting on both inulin and levan-type fructans (1- and 6-FEH). The enzyme does not have invertase activity.	O.I.	C.G.	H.G.
83.0	99.9	119.4	At2g41010	818701	ATCAMBP25 (ARABIDOPSIS THALIANA CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA)	Encodes a novel calmodulin binding protein whose gene expression is induced by dehydration and ionic (salt) and non-ionic (mannitol) osmotic stress. Lines over-expressing this gene are more sensitive and anti-sense lines are more tolerant to osmotic stress, suggesting this gene may be a negative regulator of response to osmotic stress.	O.I.	C.G.	H.G.
82.7	99.9	46.9	At3g25790	822170	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POM	O.I.	C.G.	H.G.
82.1	99.9	35.9	At2g04500	814991	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;POM	O.I.	C.G.	H.G.
82.1	99.9	35.3	At5g58750	835989	wound-responsive protein-related	F:binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BPFO	O.I.	C.G.	H.G.
81.3	99.9	77.3	At5g24410	832512	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
81.0	99.9	44.0	At1g13430	837903	ST4C (SULFOTRANSFERASE 4C)	Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment.	O.I.	C.G.	H.G.
80.9	99.9	63.2	At5g66310	836763	kinesin motor family protein	F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPBVA	O.I.	C.G.	H.G.
80.8	99.9	38.4	At3g61400	825312	2-oxoglutarate-dependent dioxygenase, putative	1-aminocyclopropane-1-carboxylate oxidase-like protein	O.I.	C.G.	H.G.
80.5	99.9	77.9	At3g47210	823874	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane;PM	O.I.	C.G.	H.G.
80.4	99.9	175.1	At2g05050	3767735	catalytic	F:catalytic activity;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
78.9	99.9	317.2	At4g24160	828516	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOMFPA	O.I.	C.G.	H.G.
77.3	99.9	107.6	At2g48010	819413	RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3)	receptor-like serine/threonine kinase (RKF3)	O.I.	C.G.	H.G.
76.6	99.9	39.6	At5g40010	833998	AATP1 (AAA-ATPase 1)	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV	O.I.	C.G.	H.G.
76.2	99.9	233.3	At3g09940	820155	MDHAR (MONODEHYDROASCORBATE REDUCTASE)	Encodes a member of the monodehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.	O.I.	C.G.	H.G.
75.9	99.9	45.1	At1g03905	839376	ABC transporter family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOAMFPV	O.I.	C.G.	H.G.
74.3	99.9	144.9	At3g25250	822119	AGC2-1 (OXIDATIVE SIGNAL-INDUCIBLE1)	Arabidopsis protein kinase	O.I.	C.G.	H.G.
73.2	99.9	225.3	At3g61190	825291	BAP1 (BON ASSOCIATION PROTEIN 1)	Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis.	O.I.	C.G.	H.G.
73.2	99.9	20.3	At3g55700	824736	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
72.9	99.9	54.9	At3g27070	822325	TOM20-1 (translocase outer membrane 20-1)	Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins	O.I.	C.G.	H.G.
72.3	99.9	14.1	At4g27290	828837	ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding	F:sugar binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
72.1	99.9	424.7	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	O.I.	C.G.	H.G.
71.7	99.9	213.1	At1g74450	843786	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
71.6	99.9	260.6	At5g45110	834545	NPR3 (NPR1-LIKE PROTEIN 3)	Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.	O.I.	C.G.	H.G.
70.7	99.9	169.6	At2g24600	816996	ankyrin repeat family protein	F:protein binding;P:biological_process unknown;C:cellular_component unknown;MOPBFVA	O.I.	C.G.	H.G.
70.6	99.9	69.0	At5g67340	836869	armadillo/beta-catenin repeat family protein / U-box domain-containing protein	F:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:endomembrane system, ubiquitin ligase complex;PMOFB	O.I.	C.G.	H.G.
70.0	99.9	39.5	At2g25460	817084	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
69.7	99.9	26.4	At3g11390	820311	DC1 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBV	O.I.	C.G.	H.G.
69.3	99.9	232.3	At4g17500	827464	ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)	Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
67.1	99.8	552.3	At5g59820	836103	RHL41 (RESPONSIVE TO HIGH LIGHT 41)	Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.	O.I.	C.G.	H.G.
66.3	99.8	189.5	At1g11670	837711	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:N-terminal protein myristoylation, multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
65.9	99.8	40.5	At3g11370	820309	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;PFOM	O.I.	C.G.	H.G.
65.5	99.8	36.9	At5g54020	835485	zinc ion binding	F:zinc ion binding;P:intracellular signaling cascade;C:intracellular;PMOF	O.I.	C.G.	H.G.
65.5	99.8	31.7	At3g60470	825218	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
64.9	99.8	310.0	At1g05575	837061	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.

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GSM ID	GSM184520
Assay name	Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2
GSE experiment	GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Microarray experiments to specifically-expressed genes

GSM ID GSM184520 Assay name Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2 GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

GSM ID GSM184520

Assay name Pericycle root cells 2hr continuous KNO3 and MSX treated, biological rep2

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root