CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184496

Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
443.3 100.0 172.1 At5g43890 834411 YUCCA5 Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype O.I. C.G. H.G.
212.2 100.0 118.0 At3g26610 822270 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
186.6 100.0 66.3 At4g20210 827768 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PO O.I. C.G. H.G.
153.6 99.9 48.1 At5g46590 834702 anac096 (Arabidopsis NAC domain containing protein 96) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
142.8 99.9 211.7 At1g19210 838504 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
115.7 99.9 220.4 At3g02840 821225 immediate-early fungal elicitor family protein F:binding;P:response to other organism, response to ozone;C:unknown;PO O.I. C.G. H.G.
110.3 99.9 130.2 At5g14760 831328 AO (L-ASPARTATE OXIDASE) At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2 O.I. C.G. H.G.
96.6 99.9 75.3 At5g06730 830562 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBM O.I. C.G. H.G.
91.3 99.9 249.1 At3g21240 821678 4CL2 (4-COUMARATE:COA LIGASE 2) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. O.I. C.G. H.G.
76.5 99.9 25.2 At4g19720 827716 glycosyl hydrolase family 18 protein F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA O.I. C.G. H.G.
72.9 99.9 65.7 At5g17980 831665 C2 domain-containing protein F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPVA O.I. C.G. H.G.
71.9 99.9 98.6 At1g55120 841955 ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity. O.I. C.G. H.G.
71.6 99.9 222.2 At1g77450 844081 anac032 (Arabidopsis NAC domain containing protein 32) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
70.2 99.9 29.3 At3g26550 822263 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO O.I. C.G. H.G.
69.2 99.9 400.6 At4g33070 829444 pyruvate decarboxylase, putative F:in 6 functions;P:unknown;C:membrane;BOFPAMV O.I. C.G. H.G.
62.6 99.8 111.8 At1g61360 842430 S-locus lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
61.0 99.8 54.6 At3g12090 820383 TET6 (TETRASPANIN6) Member of TETRASPANIN family O.I. C.G. H.G.
60.6 99.8 107.5 At1g08430 837363 ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1) Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited). O.I. C.G. H.G.
60.4 99.8 50.0 At3g27070 822325 TOM20-1 (translocase outer membrane 20-1) Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins O.I. C.G. H.G.
60.3 99.8 50.9 At5g52710 835348 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA O.I. C.G. H.G.
55.0 99.8 38.9 At1g70130 843349 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
54.4 99.8 179.4 At2g30040 817555 MAPKKK14 member of MEKK subfamily O.I. C.G. H.G.
54.1 99.8 298.4 At3g21770 821731 peroxidase 30 (PER30) (P30) (PRXR9) F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM O.I. C.G. H.G.
54.0 99.8 16.1 At1g27620 839654 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
53.6 99.8 425.8 At5g05410 830424 DREB2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes. O.I. C.G. H.G.
53.6 99.8 61.2 At5g64870 836610 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPA O.I. C.G. H.G.
53.5 99.8 32.9 At5g37550 833733 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
51.0 99.8 73.9 At4g24110 828511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
50.4 99.8 24.1 At5g14340 831284 AtMYB40 (myb domain protein 40) Member of the R2R3 factor gene family. O.I. C.G. H.G.
49.6 99.8 66.1 At2g02230 814754 AtPP2-B1 (Phloem protein 2-B1) F:carbohydrate binding;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
49.0 99.8 40.2 At3g13090 820497 ATMRP8 member of MRP subfamily O.I. C.G. H.G.
47.4 99.8 41.5 At3g27150 822334 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA O.I. C.G. H.G.
47.1 99.8 15.6 At3g27473 822369 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO O.I. C.G. H.G.
46.1 99.8 878.4 At1g77120 844047 ADH1 (ALCOHOL DEHYDROGENASE 1) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. O.I. C.G. H.G.
45.9 99.8 52.1 At5g35580 833523 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
44.9 99.8 229.8 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
44.0 99.8 107.4 At5g66650 836797 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOA O.I. C.G. H.G.
43.7 99.8 131.0 At3g10930 820264 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
42.4 99.8 18.4 At2g01660 814695 PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6) Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain. O.I. C.G. H.G.
42.3 99.8 203.1 At2g36290 818200 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endoplasmic reticulum;BPOFA O.I. C.G. H.G.
42.3 99.8 16.5 At5g52690 835346 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
41.6 99.8 55.4 At3g49860 824148 ATARLA1B (ADP-ribosylation factor-like A1B) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. C.G. H.G.
41.4 99.8 29.1 At5g40010 833998 AATP1 (AAA-ATPase 1) F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV O.I. C.G. H.G.
41.0 99.8 107.8 At1g35910 840493 trehalose-6-phosphate phosphatase, putative F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA O.I. C.G. H.G.
41.0 99.8 49.1 At3g17690 821036 ATCNGC19 member of Cyclic nucleotide gated channel family O.I. C.G. H.G.
40.2 99.8 88.3 At5g53570 835439 RabGAP/TBC domain-containing protein F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular, chloroplast;OMFBPVA O.I. C.G. H.G.
39.3 99.8 40.1 At5g12330 831108 LRP1 (LATERAL ROOT PRIMORDIUM 1) A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation. O.I. C.G. H.G.
37.7 99.7 147.3 At1g74930 843832 ORA47 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
37.2 99.7 49.5 At2g34650 818030 PID (PINOID) Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID. O.I. C.G. H.G.
36.7 99.7 31.4 At4g25380 828641 zinc finger (AN1-like) family protein F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF O.I. C.G. H.G.
36.6 99.7 129.8 At3g28510 822481 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV O.I. C.G. H.G.
36.3 99.7 151.7 At1g74450 843786 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
36.0 99.7 53.5 At3g56760 824843 calcium-dependent protein kinase, putative / CDPK, putative F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane, membrane;MOPFBVA O.I. C.G. H.G.
36.0 99.7 40.7 At3g28580 822488 AAA-type ATPase family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to abscisic acid stimulus;C:endoplasmic reticulum;OMBFPAV O.I. C.G. H.G.
35.9 99.7 273.9 At2g40890 818686 CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. O.I. C.G. H.G.
35.8 99.7 69.6 At3g24520 822047 AT-HSFC1 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
35.6 99.7 15.7 At5g52680 835345 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV O.I. C.G. H.G.
35.2 99.7 25.5 At1g07260 837237 UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
35.0 99.7 34.9 At4g14390 827084 ankyrin repeat family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVA O.I. C.G. H.G.
34.8 99.7 48.2 At1g14040 837965 - F:unknown;P:unknown;C:integral to membrane;FMPO O.I. C.G. H.G.
34.6 99.7 40.5 At1g71870 843518 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
34.5 99.7 114.7 At2g05050 3767735 catalytic F:catalytic activity;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
34.2 99.7 39.1 At5g27000 832758 ATK4 (ARABIDOPSIS THALIANA KINESIN 4) Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. O.I. C.G. H.G.
34.0 99.7 208.4 At4g24160 828516 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:unknown;C:unknown;BOMFPA O.I. C.G. H.G.
33.7 99.7 258.4 At1g01720 839265 ATAF1 Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. O.I. C.G. H.G.
33.3 99.7 288.6 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF O.I. C.G. H.G.
32.4 99.7 26.9 At2g25460 817084 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
32.2 99.7 52.1 At1g11330 837675 S-locus lectin protein kinase family protein F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
32.2 99.7 15.2 At4g16820 827388 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;POFBMV O.I. C.G. H.G.
32.1 99.7 59.8 At2g47520 819365 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.
31.7 99.7 135.8 At2g46400 819248 WRKY46 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
31.5 99.7 200.6 At3g19450 821479 ATCAD4 Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. O.I. C.G. H.G.
31.5 99.7 43.2 At5g17210 831585 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
31.3 99.7 87.9 At1g66500 842968 zinc finger (C2H2-type) family protein F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP O.I. C.G. H.G.
31.1 99.7 66.2 At3g19990 821537 unknown protein F:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;PBO O.I. C.G. H.G.
31.1 99.7 35.6 At1g61260 842420 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
31.0 99.7 75.2 At1g16370 838207 OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA O.I. C.G. H.G.
31.0 99.7 28.8 At1g03905 839376 ABC transporter family protein F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOAMFPV O.I. C.G. H.G.
30.9 99.7 84.1 At4g17030 827411 ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1) EXPANSIN-RELATED. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
30.5 99.7 372.5 At5g59820 836103 RHL41 (RESPONSIVE TO HIGH LIGHT 41) Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. O.I. C.G. H.G.
30.5 99.7 37.2 At4g36710 829824 transcription factor F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO O.I. C.G. H.G.
30.3 99.7 38.0 At5g23460 832412 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
30.1 99.7 46.4 At1g31050 839991 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
30.0 99.7 343.7 At2g26400 817180 ATARD3 (ACIREDUCTONE DIOXYGENASE 3) Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD�)family. O.I. C.G. H.G.
30.0 99.7 21.4 At3g60470 825218 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
29.3 99.7 18.5 At1g71450 843486 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. O.I. C.G. H.G.
29.2 99.7 36.8 At3g11020 820273 DREB2B (DRE/CRT-BINDING PROTEIN 2B) encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A. O.I. C.G. H.G.
28.8 99.7 56.3 At2g18140 816327 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall;PFOBM O.I. C.G. H.G.
28.6 99.7 43.0 At3g18710 821402 PUB29 (PLANT U-BOX 29) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
28.4 99.7 143.8 At3g62720 825446 XT1 (XYLOSYLTRANSFERASE 1) Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides. O.I. C.G. H.G.
28.2 99.7 60.3 At5g17850 831653 cation exchanger, putative (CAX8) F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA O.I. C.G. H.G.
28.0 99.7 70.2 At5g24760 832545 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV O.I. C.G. H.G.
27.9 99.7 27.1 At5g06740 830563 lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
27.8 99.7 141.1 At3g19240 821458 - F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;FOPM O.I. C.G. H.G.
27.8 99.7 11.5 At4g13820 827016 disease resistance family protein / LRR family protein F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
27.5 99.7 92.4 At3g62260 825399 protein phosphatase 2C, putative / PP2C, putative F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA O.I. C.G. H.G.
27.5 99.7 58.3 At4g37250 829879 leucine-rich repeat family protein / protein kinase family protein F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
27.0 99.7 44.7 At4g39570 830111 kelch repeat-containing F-box family protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBOVA O.I. C.G. H.G.
26.9 99.7 202.2 At4g25810 828686 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) xyloglucan endotransglycosylase-related protein (XTR6) O.I. C.G. H.G.
26.8 99.7 19.2 At1g64700 842778 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
443.3	100.0	172.1	At5g43890	834411	YUCCA5	Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype	O.I.	C.G.	H.G.
212.2	100.0	118.0	At3g26610	822270	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
186.6	100.0	66.3	At4g20210	827768	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PO	O.I.	C.G.	H.G.
153.6	99.9	48.1	At5g46590	834702	anac096 (Arabidopsis NAC domain containing protein 96)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
142.8	99.9	211.7	At1g19210	838504	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
115.7	99.9	220.4	At3g02840	821225	immediate-early fungal elicitor family protein	F:binding;P:response to other organism, response to ozone;C:unknown;PO	O.I.	C.G.	H.G.
110.3	99.9	130.2	At5g14760	831328	AO (L-ASPARTATE OXIDASE)	At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2	O.I.	C.G.	H.G.
96.6	99.9	75.3	At5g06730	830562	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBM	O.I.	C.G.	H.G.
91.3	99.9	249.1	At3g21240	821678	4CL2 (4-COUMARATE:COA LIGASE 2)	encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.	O.I.	C.G.	H.G.
76.5	99.9	25.2	At4g19720	827716	glycosyl hydrolase family 18 protein	F:cation binding, chitinase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;MBFOVPA	O.I.	C.G.	H.G.
72.9	99.9	65.7	At5g17980	831665	C2 domain-containing protein	F:unknown;P:unknown;C:endoplasmic reticulum, plasma membrane;MOBFPVA	O.I.	C.G.	H.G.
71.9	99.9	98.6	At1g55120	841955	ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)	Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.	O.I.	C.G.	H.G.
71.6	99.9	222.2	At1g77450	844081	anac032 (Arabidopsis NAC domain containing protein 32)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
70.2	99.9	29.3	At3g26550	822263	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMO	O.I.	C.G.	H.G.
69.2	99.9	400.6	At4g33070	829444	pyruvate decarboxylase, putative	F:in 6 functions;P:unknown;C:membrane;BOFPAMV	O.I.	C.G.	H.G.
62.6	99.8	111.8	At1g61360	842430	S-locus lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
61.0	99.8	54.6	At3g12090	820383	TET6 (TETRASPANIN6)	Member of TETRASPANIN family	O.I.	C.G.	H.G.
60.6	99.8	107.5	At1g08430	837363	ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1)	Encodes a Al-activated malate efflux transporter. Is essential for aluminum tolerance but does not represent the major Al tolerance QTL. Staurosporine and calyculin A both block all changes in AtALMT1 gene expression (as a result malate release is totally inhibited).	O.I.	C.G.	H.G.
60.4	99.8	50.0	At3g27070	822325	TOM20-1 (translocase outer membrane 20-1)	Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins	O.I.	C.G.	H.G.
60.3	99.8	50.9	At5g52710	835348	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMFBPVA	O.I.	C.G.	H.G.
55.0	99.8	38.9	At1g70130	843349	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
54.4	99.8	179.4	At2g30040	817555	MAPKKK14	member of MEKK subfamily	O.I.	C.G.	H.G.
54.1	99.8	298.4	At3g21770	821731	peroxidase 30 (PER30) (P30) (PRXR9)	F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM	O.I.	C.G.	H.G.
54.0	99.8	16.1	At1g27620	839654	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
53.6	99.8	425.8	At5g05410	830424	DREB2A	Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes.	O.I.	C.G.	H.G.
53.6	99.8	61.2	At5g64870	836610	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPA	O.I.	C.G.	H.G.
53.5	99.8	32.9	At5g37550	833733	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
51.0	99.8	73.9	At4g24110	828511	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
50.4	99.8	24.1	At5g14340	831284	AtMYB40 (myb domain protein 40)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
49.6	99.8	66.1	At2g02230	814754	AtPP2-B1 (Phloem protein 2-B1)	F:carbohydrate binding;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
49.0	99.8	40.2	At3g13090	820497	ATMRP8	member of MRP subfamily	O.I.	C.G.	H.G.
47.4	99.8	41.5	At3g27150	822334	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFA	O.I.	C.G.	H.G.
47.1	99.8	15.6	At3g27473	822369	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO	O.I.	C.G.	H.G.
46.1	99.8	878.4	At1g77120	844047	ADH1 (ALCOHOL DEHYDROGENASE 1)	Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.	O.I.	C.G.	H.G.
45.9	99.8	52.1	At5g35580	833523	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
44.9	99.8	229.8	At4g34410	829591	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
44.0	99.8	107.4	At5g66650	836797	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOA	O.I.	C.G.	H.G.
43.7	99.8	131.0	At3g10930	820264	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
42.4	99.8	18.4	At2g01660	814695	PDLP6 (PLASMODESMATA-LOCATED PROTEIN 6)	Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.	O.I.	C.G.	H.G.
42.3	99.8	203.1	At2g36290	818200	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:biological_process unknown;C:endoplasmic reticulum;BPOFA	O.I.	C.G.	H.G.
42.3	99.8	16.5	At5g52690	835346	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
41.6	99.8	55.4	At3g49860	824148	ATARLA1B (ADP-ribosylation factor-like A1B)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	C.G.	H.G.
41.4	99.8	29.1	At5g40010	833998	AATP1 (AAA-ATPase 1)	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV	O.I.	C.G.	H.G.
41.0	99.8	107.8	At1g35910	840493	trehalose-6-phosphate phosphatase, putative	F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA	O.I.	C.G.	H.G.
41.0	99.8	49.1	At3g17690	821036	ATCNGC19	member of Cyclic nucleotide gated channel family	O.I.	C.G.	H.G.
40.2	99.8	88.3	At5g53570	835439	RabGAP/TBC domain-containing protein	F:RAB GTPase activator activity;P:regulation of Rab GTPase activity;C:intracellular, chloroplast;OMFBPVA	O.I.	C.G.	H.G.
39.3	99.8	40.1	At5g12330	831108	LRP1 (LATERAL ROOT PRIMORDIUM 1)	A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Expressed in lateral root primordia and induced by auxin. SWP1 is involved in the repression of LRP1 via histone deacetylation.	O.I.	C.G.	H.G.
37.7	99.7	147.3	At1g74930	843832	ORA47	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
37.2	99.7	49.5	At2g34650	818030	PID (PINOID)	Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID.	O.I.	C.G.	H.G.
36.7	99.7	31.4	At4g25380	828641	zinc finger (AN1-like) family protein	F:DNA binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MPOVF	O.I.	C.G.	H.G.
36.6	99.7	129.8	At3g28510	822481	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;OMBFPAV	O.I.	C.G.	H.G.
36.3	99.7	151.7	At1g74450	843786	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
36.0	99.7	53.5	At3g56760	824843	calcium-dependent protein kinase, putative / CDPK, putative	F:in 6 functions;P:protein amino acid phosphorylation, N-terminal protein myristoylation;C:plasma membrane, membrane;MOPFBVA	O.I.	C.G.	H.G.
36.0	99.7	40.7	At3g28580	822488	AAA-type ATPase family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:response to abscisic acid stimulus;C:endoplasmic reticulum;OMBFPAV	O.I.	C.G.	H.G.
35.9	99.7	273.9	At2g40890	818686	CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)	encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.	O.I.	C.G.	H.G.
35.8	99.7	69.6	At3g24520	822047	AT-HSFC1	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
35.6	99.7	15.7	At5g52680	835345	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;BPOMFV	O.I.	C.G.	H.G.
35.2	99.7	25.5	At1g07260	837237	UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
35.0	99.7	34.9	At4g14390	827084	ankyrin repeat family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBVA	O.I.	C.G.	H.G.
34.8	99.7	48.2	At1g14040	837965	-	F:unknown;P:unknown;C:integral to membrane;FMPO	O.I.	C.G.	H.G.
34.6	99.7	40.5	At1g71870	843518	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
34.5	99.7	114.7	At2g05050	3767735	catalytic	F:catalytic activity;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
34.2	99.7	39.1	At5g27000	832758	ATK4 (ARABIDOPSIS THALIANA KINESIN 4)	Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner.	O.I.	C.G.	H.G.
34.0	99.7	208.4	At4g24160	828516	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:unknown;C:unknown;BOMFPA	O.I.	C.G.	H.G.
33.7	99.7	258.4	At1g01720	839265	ATAF1	Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.	O.I.	C.G.	H.G.
33.3	99.7	288.6	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	O.I.	C.G.	H.G.
32.4	99.7	26.9	At2g25460	817084	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
32.2	99.7	52.1	At1g11330	837675	S-locus lectin protein kinase family protein	F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
32.2	99.7	15.2	At4g16820	827388	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:unknown;POFBMV	O.I.	C.G.	H.G.
32.1	99.7	59.8	At2g47520	819365	AP2 domain-containing transcription factor, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.
31.7	99.7	135.8	At2g46400	819248	WRKY46	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
31.5	99.7	200.6	At3g19450	821479	ATCAD4	Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.	O.I.	C.G.	H.G.
31.5	99.7	43.2	At5g17210	831585	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
31.3	99.7	87.9	At1g66500	842968	zinc finger (C2H2-type) family protein	F:zinc ion binding;P:biological_process unknown;C:intracellular;MFOP	O.I.	C.G.	H.G.
31.1	99.7	66.2	At3g19990	821537	unknown protein	F:unknown;P:biological_process unknown;C:chloroplast stroma, chloroplast;PBO	O.I.	C.G.	H.G.
31.1	99.7	35.6	At1g61260	842420	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
31.0	99.7	75.2	At1g16370	838207	OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA	O.I.	C.G.	H.G.
31.0	99.7	28.8	At1g03905	839376	ABC transporter family protein	F:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOAMFPV	O.I.	C.G.	H.G.
30.9	99.7	84.1	At4g17030	827411	ATEXLB1 (ARABIDOPSIS THALIANA EXPANSIN-LIKE B1)	EXPANSIN-RELATED. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
30.5	99.7	372.5	At5g59820	836103	RHL41 (RESPONSIVE TO HIGH LIGHT 41)	Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.	O.I.	C.G.	H.G.
30.5	99.7	37.2	At4g36710	829824	transcription factor	F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
30.3	99.7	38.0	At5g23460	832412	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
30.1	99.7	46.4	At1g31050	839991	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
30.0	99.7	343.7	At2g26400	817180	ATARD3 (ACIREDUCTONE DIOXYGENASE 3)	Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD�)family.	O.I.	C.G.	H.G.
30.0	99.7	21.4	At3g60470	825218	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
29.3	99.7	18.5	At1g71450	843486	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.	O.I.	C.G.	H.G.
29.2	99.7	36.8	At3g11020	820273	DREB2B (DRE/CRT-BINDING PROTEIN 2B)	encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A.	O.I.	C.G.	H.G.
28.8	99.7	56.3	At2g18140	816327	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:cell wall;PFOBM	O.I.	C.G.	H.G.
28.6	99.7	43.0	At3g18710	821402	PUB29 (PLANT U-BOX 29)	Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
28.4	99.7	143.8	At3g62720	825446	XT1 (XYLOSYLTRANSFERASE 1)	Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.	O.I.	C.G.	H.G.
28.2	99.7	60.3	At5g17850	831653	cation exchanger, putative (CAX8)	F:cation:cation antiporter activity, calcium:sodium antiporter activity;P:cation transport;C:endomembrane system, integral to membrane;MBOFPA	O.I.	C.G.	H.G.
28.0	99.7	70.2	At5g24760	832545	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV	O.I.	C.G.	H.G.
27.9	99.7	27.1	At5g06740	830563	lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
27.8	99.7	141.1	At3g19240	821458	-	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;FOPM	O.I.	C.G.	H.G.
27.8	99.7	11.5	At4g13820	827016	disease resistance family protein / LRR family protein	F:protein binding, kinase activity;P:signal transduction;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
27.5	99.7	92.4	At3g62260	825399	protein phosphatase 2C, putative / PP2C, putative	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;MPOFBVA	O.I.	C.G.	H.G.
27.5	99.7	58.3	At4g37250	829879	leucine-rich repeat family protein / protein kinase family protein	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
27.0	99.7	44.7	At4g39570	830111	kelch repeat-containing F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMBOVA	O.I.	C.G.	H.G.
26.9	99.7	202.2	At4g25810	828686	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	xyloglucan endotransglycosylase-related protein (XTR6)	O.I.	C.G.	H.G.
26.8	99.7	19.2	At1g64700	842778	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.

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GSM ID	GSM184496
Assay name	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3
GSE experiment	GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Microarray experiments to specifically-expressed genes

GSM ID GSM184496 Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3 GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

GSM ID GSM184496

Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep3

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root