CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184494

Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
610.8 100.0 119.9 At4g20210 827768 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PO O.I. C.G. H.G.
564.8 100.0 139.4 At2g18800 816395 XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21) F:hydrolase activity, acting on glycosyl bonds, xyloglucan endotransglucosylase activity;P:primary root development, cell wall modification;C:endomembrane system, apoplast, cell wall;PFBO O.I. C.G. H.G.
439.9 100.0 169.9 At3g26610 822270 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV O.I. C.G. H.G.
385.4 100.0 160.5 At5g43890 834411 YUCCA5 Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype O.I. C.G. H.G.
259.3 100.0 66.0 At5g66815 836815 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
226.7 100.0 141.9 At1g23760 838987 JP630 Encodes aromatic rich glycoprotein JP630. O.I. C.G. H.G.
172.9 100.0 102.1 At2g16980 816201 tetracycline transporter F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF O.I. C.G. H.G.
118.0 99.9 48.9 At5g37550 833733 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
113.0 99.9 143.5 At1g16370 838207 OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6) F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA O.I. C.G. H.G.
109.5 99.9 48.4 At4g17220 827434 ATMAP70-5 (microtubule-associated proteins 70-5) Encodes a microtubule associated protein (MAP70-5). Expressed in all tissues. O.I. C.G. H.G.
80.9 99.9 119.2 At5g24760 832545 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV O.I. C.G. H.G.
76.7 99.9 59.5 At5g44530 834480 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BOPFAM O.I. C.G. H.G.
73.2 99.9 30.2 At1g77020 844038 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
72.8 99.9 222.5 At3g21240 821678 4CL2 (4-COUMARATE:COA LIGASE 2) encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate. O.I. C.G. H.G.
72.3 99.9 56.8 At5g27000 832758 ATK4 (ARABIDOPSIS THALIANA KINESIN 4) Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. O.I. C.G. H.G.
69.9 99.9 56.4 At4g36710 829824 transcription factor F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO O.I. C.G. H.G.
66.8 99.8 17.9 At1g27620 839654 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB O.I. C.G. H.G.
64.0 99.8 143.3 At1g20823 838674 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV O.I. C.G. H.G.
63.9 99.8 55.0 At1g71870 843518 MATE efflux family protein F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA O.I. C.G. H.G.
59.8 99.8 47.9 At5g57620 835866 MYB36 (myb domain protein 36) Encodes a putative transcription factor (MYB36). O.I. C.G. H.G.
58.3 99.8 349.4 At2g40890 818686 CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3) encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level. O.I. C.G. H.G.
57.5 99.8 32.6 At1g07260 837237 UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3) F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
55.2 99.8 49.3 At1g12610 837817 DDF1 (DWARF AND DELAYED FLOWERING 1) Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor. O.I. C.G. H.G.
53.3 99.8 529.8 At2g37040 818280 pal1 (Phe ammonia lyase 1) encodes a protein similar to phenylalanine ammonia-lyase O.I. C.G. H.G.
53.1 99.8 66.2 At5g05790 830464 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMO O.I. C.G. H.G.
53.1 99.8 38.3 At1g70130 843349 lectin protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
52.7 99.8 67.4 At3g45700 823712 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF O.I. C.G. H.G.
52.7 99.8 24.6 At5g14340 831284 AtMYB40 (myb domain protein 40) Member of the R2R3 factor gene family. O.I. C.G. H.G.
52.1 99.8 374.6 At2g05440 815093 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
51.7 99.8 60.8 At1g31050 839991 transcription factor F:transcription factor activity;P:regulation of transcription;C:nucleus;P O.I. C.G. H.G.
50.2 99.8 47.9 At5g26731 832715 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
49.4 99.8 168.6 At1g77690 844105 LAX3 (LIKE AUX1 3) Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia. O.I. C.G. H.G.
48.4 99.8 123.3 At1g19210 838504 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
46.6 99.8 77.5 At3g23800 821962 SBP3 (selenium-binding protein 3) F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA O.I. C.G. H.G.
46.5 99.8 58.6 At3g49860 824148 ATARLA1B (ADP-ribosylation factor-like A1B) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. C.G. H.G.
46.4 99.8 303.3 At1g01720 839265 ATAF1 Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. O.I. C.G. H.G.
46.4 99.8 52.1 At5g06730 830562 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBM O.I. C.G. H.G.
46.3 99.8 340.6 At4g29780 829100 unknown protein F:unknown;P:unknown;C:cellular_component unknown;MPF O.I. C.G. H.G.
46.0 99.8 25.5 At5g40630 834062 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV O.I. C.G. H.G.
44.3 99.8 52.3 At2g36650 818237 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV O.I. C.G. H.G.
44.1 99.8 39.0 At5g44350 834461 ethylene-responsive nuclear protein -related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
43.9 99.8 158.9 At1g74930 843832 ORA47 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
43.9 99.8 132.8 At2g36310 818204 URH1 (URIDINE-RIBOHYDROLASE 1) F:hydrolase activity, inosine nucleosidase activity, adenosine nucleosidase activity, uridine nucleosidase activity;P:uridine catabolic process;C:cytosol;BOMFPA O.I. C.G. H.G.
42.5 99.8 72.5 At4g37250 829879 leucine-rich repeat family protein / protein kinase family protein F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
42.4 99.8 52.4 At3g18710 821402 PUB29 (PLANT U-BOX 29) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
42.4 99.8 15.7 At4g24180 828519 - F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV O.I. C.G. H.G.
41.5 99.8 49.5 At5g35580 833523 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA O.I. C.G. H.G.
41.5 99.8 19.3 At2g37440 818321 endonuclease/exonuclease/phosphatase family protein F:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:unknown;MPFO O.I. C.G. H.G.
41.1 99.8 267.1 At5g02270 831709 ATNAP9 member of NAP subfamily O.I. C.G. H.G.
41.1 99.8 127.1 At3g10930 820264 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
40.8 99.8 44.7 At3g12090 820383 TET6 (TETRASPANIN6) Member of TETRASPANIN family O.I. C.G. H.G.
40.2 99.8 105.6 At3g52920 824458 unknown protein F:unknown;P:unknown;C:plasma membrane;MOBFPAV O.I. C.G. H.G.
40.1 99.8 166.3 At1g77450 844081 anac032 (Arabidopsis NAC domain containing protein 32) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
39.6 99.8 40.1 At1g61260 842420 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
39.5 99.8 254.9 At3g21770 821731 peroxidase 30 (PER30) (P30) (PRXR9) F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM O.I. C.G. H.G.
38.8 99.8 30.4 At2g16970 816200 MEE15 (maternal effect embryo arrest 15) F:tetracycline transporter activity;P:embryonic development ending in seed dormancy;C:integral to membrane;BOMP O.I. C.G. H.G.
38.1 99.8 53.6 At3g47210 823874 unknown protein F:unknown;P:biological_process unknown;C:plasma membrane;PM O.I. C.G. H.G.
37.9 99.8 34.7 At5g03960 830275 IQD12 (IQ-domain 12) F:calmodulin binding;P:biological_process unknown;C:unknown;PBFO O.I. C.G. H.G.
37.0 99.7 208.5 At4g34410 829591 RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
36.2 99.7 149.6 At1g29050 839779 unknown protein F:unknown;P:biological_process unknown;C:endomembrane system;PO O.I. C.G. H.G.
34.9 99.7 145.1 At4g13660 827000 PRR2 (PINORESINOL REDUCTASE 2) Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol. O.I. C.G. H.G.
34.7 99.7 31.7 At3g59370 825106 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA O.I. C.G. H.G.
34.5 99.7 341.7 At5g05410 830424 DREB2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes. O.I. C.G. H.G.
33.3 99.7 88.7 At3g28340 822462 GATL10 (Galacturonosyltransferase-like 10) Encodes a protein with putative galacturonosyltransferase activity. O.I. C.G. H.G.
33.1 99.7 357.1 At4g14130 827051 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7) xyloglucan endotransglycosylase-related protein (XTR7) O.I. C.G. H.G.
33.0 99.7 233.9 At1g77330 844069 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor) O.I. C.G. H.G.
32.6 99.7 116.1 At4g01450 828176 nodulin MtN21 family protein F:unknown;P:unknown;C:endomembrane system, membrane;PBOM O.I. C.G. H.G.
32.3 99.7 33.1 At4g24670 828569 TAR2 (TRYPTOPHAN AMINOTRANSFERASE RELATED 2) Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. O.I. C.G. H.G.
32.0 99.7 41.9 At3g15300 820761 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM O.I. C.G. H.G.
31.4 99.7 326.6 At1g52760 841709 esterase/lipase/thioesterase family protein F:catalytic activity;P:unknown;C:cellular_component unknown;BPOMFVA O.I. C.G. H.G.
31.1 99.7 32.8 At3g29770 822677 MES11 (METHYL ESTERASE 11) Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro. O.I. C.G. H.G.
30.9 99.7 67.4 At2g44300 819038 lipid transfer protein-related F:lipid binding;P:lipid transport;C:plasma membrane, anchored to membrane;P O.I. C.G. H.G.
30.2 99.7 63.9 At3g24520 822047 AT-HSFC1 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
29.5 99.7 184.2 At4g11280 826730 ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6) encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family O.I. C.G. H.G.
29.5 99.7 27.9 At5g06740 830563 lectin protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
29.4 99.7 33.3 At1g43020 840901 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO O.I. C.G. H.G.
29.4 99.7 20.5 At3g49690 824131 MYB84 (MYB DOMAIN PROTEIN 84) "Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. " O.I. C.G. H.G.
29.2 99.7 22.1 At1g59940 842288 ARR3 (RESPONSE REGULATOR 3) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner. O.I. C.G. H.G.
28.6 99.7 70.0 At3g02800 821239 phosphatase/ phosphoprotein phosphatase/ protein tyrosine phosphatase F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FOPBM O.I. C.G. H.G.
28.0 99.7 206.4 At4g25810 828686 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6) xyloglucan endotransglycosylase-related protein (XTR6) O.I. C.G. H.G.
27.9 99.7 44.1 At5g64870 836610 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPA O.I. C.G. H.G.
27.6 99.7 42.9 At1g14040 837965 - F:unknown;P:unknown;C:integral to membrane;FMPO O.I. C.G. H.G.
27.6 99.7 29.9 At2g23560 816888 MES7 (METHYL ESTERASE 7) Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, and methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeGA4, or MEGA9 in vitro. MES7 appears to be involved in MeSA hydrolysis in planta. Expression of MES7 can restore systemic acquired resistance in SAR-deficient tobacco plants. O.I. C.G. H.G.
27.2 99.7 29.9 At4g22110 828300 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
26.9 99.7 19.7 At4g14650 827115 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;OMFBPVA O.I. C.G. H.G.
26.7 99.7 19.2 At1g64700 842778 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P O.I. C.G. H.G.
26.4 99.7 19.9 At5g46590 834702 anac096 (Arabidopsis NAC domain containing protein 96) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
26.3 99.7 144.6 At4g26320 828738 AGP13 (arabinogalactan protein 13) F:unknown;P:unknown;C:anchored to membrane;P O.I. C.G. H.G.
26.1 99.7 92.9 At5g10830 830950 embryo-abundant protein-related F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA O.I. C.G. H.G.
25.8 99.7 107.1 At1g78100 844146 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
25.8 99.7 38.9 At3g17690 821036 ATCNGC19 member of Cyclic nucleotide gated channel family O.I. C.G. H.G.
25.7 99.7 341.6 At5g64310 836552 AGP1 (ARABINOGALACTAN PROTEIN 1) Encodes arabinogalactan-protein (AGP1). O.I. C.G. H.G.
25.7 99.7 158.4 At2g36290 818200 hydrolase, alpha/beta fold family protein F:hydrolase activity;P:biological_process unknown;C:endoplasmic reticulum;BPOFA O.I. C.G. H.G.
25.6 99.7 21.9 At1g55380 841985 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFVA O.I. C.G. H.G.
25.3 99.6 36.5 At2g35270 818094 DNA-binding protein-related F:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVA O.I. C.G. H.G.
25.2 99.6 338.2 At5g59820 836103 RHL41 (RESPONSIVE TO HIGH LIGHT 41) Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. O.I. C.G. H.G.
25.1 99.6 281.8 At3g02780 820960 IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2) Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway. O.I. C.G. H.G.
25.1 99.6 34.9 At3g23160 821892 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POB O.I. C.G. H.G.
24.9 99.6 349.1 At1g48600 841281 phosphoethanolamine N-methyltransferase 2, putative (NMT2) F:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMV O.I. C.G. H.G.
24.9 99.6 88.6 At1g28680 839768 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
610.8	100.0	119.9	At4g20210	827768	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:metabolic process;C:chloroplast;PO	O.I.	C.G.	H.G.
564.8	100.0	139.4	At2g18800	816395	XTH21 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 21)	F:hydrolase activity, acting on glycosyl bonds, xyloglucan endotransglucosylase activity;P:primary root development, cell wall modification;C:endomembrane system, apoplast, cell wall;PFBO	O.I.	C.G.	H.G.
439.9	100.0	169.9	At3g26610	822270	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:endomembrane system;FPBOMAV	O.I.	C.G.	H.G.
385.4	100.0	160.5	At5g43890	834411	YUCCA5	Encodes a YUCCA-like putative flavin monooxygenase, the activation tagging mutant has increased level of IAA, increased auxin response and phenotype of auxin overproduction, rescues erecta mutant phenotype	O.I.	C.G.	H.G.
259.3	100.0	66.0	At5g66815	836815	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
226.7	100.0	141.9	At1g23760	838987	JP630	Encodes aromatic rich glycoprotein JP630.	O.I.	C.G.	H.G.
172.9	100.0	102.1	At2g16980	816201	tetracycline transporter	F:tetracycline transporter activity;P:response to antibiotic, tetracycline transport;C:endomembrane system, integral to membrane;BOMPAF	O.I.	C.G.	H.G.
118.0	99.9	48.9	At5g37550	833733	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
113.0	99.9	143.5	At1g16370	838207	OCT6 (ORGANIC CATION/CARNITINE TRANSPORTER 6)	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:unknown;C:membrane;BMFPOA	O.I.	C.G.	H.G.
109.5	99.9	48.4	At4g17220	827434	ATMAP70-5 (microtubule-associated proteins 70-5)	Encodes a microtubule associated protein (MAP70-5). Expressed in all tissues.	O.I.	C.G.	H.G.
80.9	99.9	119.2	At5g24760	832545	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV	O.I.	C.G.	H.G.
76.7	99.9	59.5	At5g44530	834480	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BOPFAM	O.I.	C.G.	H.G.
73.2	99.9	30.2	At1g77020	844038	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
72.8	99.9	222.5	At3g21240	821678	4CL2 (4-COUMARATE:COA LIGASE 2)	encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.	O.I.	C.G.	H.G.
72.3	99.9	56.8	At5g27000	832758	ATK4 (ARABIDOPSIS THALIANA KINESIN 4)	Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner.	O.I.	C.G.	H.G.
69.9	99.9	56.4	At4g36710	829824	transcription factor	F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
66.8	99.8	17.9	At1g27620	839654	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFB	O.I.	C.G.	H.G.
64.0	99.8	143.3	At1g20823	838674	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to chitin;C:unknown;PMOFV	O.I.	C.G.	H.G.
63.9	99.8	55.0	At1g71870	843518	MATE efflux family protein	F:antiporter activity, drug transporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFMA	O.I.	C.G.	H.G.
59.8	99.8	47.9	At5g57620	835866	MYB36 (myb domain protein 36)	Encodes a putative transcription factor (MYB36).	O.I.	C.G.	H.G.
58.3	99.8	349.4	At2g40890	818686	CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3)	encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.	O.I.	C.G.	H.G.
57.5	99.8	32.6	At1g07260	837237	UGT71C3 (UDP-GLUCOSYL TRANSFERASE 71C3)	F:quercetin 3-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
55.2	99.8	49.3	At1g12610	837817	DDF1 (DWARF AND DELAYED FLOWERING 1)	Encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (DDF1). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. Overexpression of this gene results in delayed flowering and dwarfism, reduction of gibberellic acid biosynthesis, and increased tolerance to high levels of salt. This gene is expressed in all tissues examined, but most abundantly expressed in upper stems. Overexpression of this gene is also correlated with increased expression of GA biosynthetic genes and RD29A (a cold and drought responsive gene). Under salt stress it induces the expression of GAOX7, which encodes ad C20-GA inhibitor.	O.I.	C.G.	H.G.
53.3	99.8	529.8	At2g37040	818280	pal1 (Phe ammonia lyase 1)	encodes a protein similar to phenylalanine ammonia-lyase	O.I.	C.G.	H.G.
53.1	99.8	66.2	At5g05790	830464	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PMO	O.I.	C.G.	H.G.
53.1	99.8	38.3	At1g70130	843349	lectin protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
52.7	99.8	67.4	At3g45700	823712	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;PMBOF	O.I.	C.G.	H.G.
52.7	99.8	24.6	At5g14340	831284	AtMYB40 (myb domain protein 40)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
52.1	99.8	374.6	At2g05440	815093	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA	O.I.	C.G.	H.G.
51.7	99.8	60.8	At1g31050	839991	transcription factor	F:transcription factor activity;P:regulation of transcription;C:nucleus;P	O.I.	C.G.	H.G.
50.2	99.8	47.9	At5g26731	832715	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
49.4	99.8	168.6	At1g77690	844105	LAX3 (LIKE AUX1 3)	Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.	O.I.	C.G.	H.G.
48.4	99.8	123.3	At1g19210	838504	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
46.6	99.8	77.5	At3g23800	821962	SBP3 (selenium-binding protein 3)	F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA	O.I.	C.G.	H.G.
46.5	99.8	58.6	At3g49860	824148	ATARLA1B (ADP-ribosylation factor-like A1B)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	C.G.	H.G.
46.4	99.8	303.3	At1g01720	839265	ATAF1	Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.	O.I.	C.G.	H.G.
46.4	99.8	52.1	At5g06730	830562	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:plasma membrane;PFOBM	O.I.	C.G.	H.G.
46.3	99.8	340.6	At4g29780	829100	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;MPF	O.I.	C.G.	H.G.
46.0	99.8	25.5	At5g40630	834062	ubiquitin family protein	F:molecular_function unknown;P:protein modification process;C:chloroplast;MPOBFV	O.I.	C.G.	H.G.
44.3	99.8	52.3	At2g36650	818237	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBFPAV	O.I.	C.G.	H.G.
44.1	99.8	39.0	At5g44350	834461	ethylene-responsive nuclear protein -related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
43.9	99.8	158.9	At1g74930	843832	ORA47	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
43.9	99.8	132.8	At2g36310	818204	URH1 (URIDINE-RIBOHYDROLASE 1)	F:hydrolase activity, inosine nucleosidase activity, adenosine nucleosidase activity, uridine nucleosidase activity;P:uridine catabolic process;C:cytosol;BOMFPA	O.I.	C.G.	H.G.
42.5	99.8	72.5	At4g37250	829879	leucine-rich repeat family protein / protein kinase family protein	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
42.4	99.8	52.4	At3g18710	821402	PUB29 (PLANT U-BOX 29)	Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
42.4	99.8	15.7	At4g24180	828519	-	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV	O.I.	C.G.	H.G.
41.5	99.8	49.5	At5g35580	833523	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA	O.I.	C.G.	H.G.
41.5	99.8	19.3	At2g37440	818321	endonuclease/exonuclease/phosphatase family protein	F:hydrolase activity, inositol or phosphatidylinositol phosphatase activity;P:biological_process unknown;C:unknown;MPFO	O.I.	C.G.	H.G.
41.1	99.8	267.1	At5g02270	831709	ATNAP9	member of NAP subfamily	O.I.	C.G.	H.G.
41.1	99.8	127.1	At3g10930	820264	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
40.8	99.8	44.7	At3g12090	820383	TET6 (TETRASPANIN6)	Member of TETRASPANIN family	O.I.	C.G.	H.G.
40.2	99.8	105.6	At3g52920	824458	unknown protein	F:unknown;P:unknown;C:plasma membrane;MOBFPAV	O.I.	C.G.	H.G.
40.1	99.8	166.3	At1g77450	844081	anac032 (Arabidopsis NAC domain containing protein 32)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
39.6	99.8	40.1	At1g61260	842420	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
39.5	99.8	254.9	At3g21770	821731	peroxidase 30 (PER30) (P30) (PRXR9)	F:transferase activity, transferring glycosyl groups, peroxidase activity;P:response to oxidative stress;C:cell wall, nucleus, cytoplasm, plant-type cell wall;PFOBM	O.I.	C.G.	H.G.
38.8	99.8	30.4	At2g16970	816200	MEE15 (maternal effect embryo arrest 15)	F:tetracycline transporter activity;P:embryonic development ending in seed dormancy;C:integral to membrane;BOMP	O.I.	C.G.	H.G.
38.1	99.8	53.6	At3g47210	823874	unknown protein	F:unknown;P:biological_process unknown;C:plasma membrane;PM	O.I.	C.G.	H.G.
37.9	99.8	34.7	At5g03960	830275	IQD12 (IQ-domain 12)	F:calmodulin binding;P:biological_process unknown;C:unknown;PBFO	O.I.	C.G.	H.G.
37.0	99.7	208.5	At4g34410	829591	RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
36.2	99.7	149.6	At1g29050	839779	unknown protein	F:unknown;P:biological_process unknown;C:endomembrane system;PO	O.I.	C.G.	H.G.
34.9	99.7	145.1	At4g13660	827000	PRR2 (PINORESINOL REDUCTASE 2)	Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.	O.I.	C.G.	H.G.
34.7	99.7	31.7	At3g59370	825106	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPVA	O.I.	C.G.	H.G.
34.5	99.7	341.7	At5g05410	830424	DREB2A	Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes.	O.I.	C.G.	H.G.
33.3	99.7	88.7	At3g28340	822462	GATL10 (Galacturonosyltransferase-like 10)	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	H.G.
33.1	99.7	357.1	At4g14130	827051	XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7)	xyloglucan endotransglycosylase-related protein (XTR7)	O.I.	C.G.	H.G.
33.0	99.7	233.9	At1g77330	844069	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)	O.I.	C.G.	H.G.
32.6	99.7	116.1	At4g01450	828176	nodulin MtN21 family protein	F:unknown;P:unknown;C:endomembrane system, membrane;PBOM	O.I.	C.G.	H.G.
32.3	99.7	33.1	At4g24670	828569	TAR2 (TRYPTOPHAN AMINOTRANSFERASE RELATED 2)	Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.	O.I.	C.G.	H.G.
32.0	99.7	41.9	At3g15300	820761	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PM	O.I.	C.G.	H.G.
31.4	99.7	326.6	At1g52760	841709	esterase/lipase/thioesterase family protein	F:catalytic activity;P:unknown;C:cellular_component unknown;BPOMFVA	O.I.	C.G.	H.G.
31.1	99.7	32.8	At3g29770	822677	MES11 (METHYL ESTERASE 11)	Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.	O.I.	C.G.	H.G.
30.9	99.7	67.4	At2g44300	819038	lipid transfer protein-related	F:lipid binding;P:lipid transport;C:plasma membrane, anchored to membrane;P	O.I.	C.G.	H.G.
30.2	99.7	63.9	At3g24520	822047	AT-HSFC1	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
29.5	99.7	184.2	At4g11280	826730	ACS6 (1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6)	encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family	O.I.	C.G.	H.G.
29.5	99.7	27.9	At5g06740	830563	lectin protein kinase family protein	F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
29.4	99.7	33.3	At1g43020	840901	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBO	O.I.	C.G.	H.G.
29.4	99.7	20.5	At3g49690	824131	MYB84 (MYB DOMAIN PROTEIN 84)	"Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. "	O.I.	C.G.	H.G.
29.2	99.7	22.1	At1g59940	842288	ARR3 (RESPONSE REGULATOR 3)	Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.	O.I.	C.G.	H.G.
28.6	99.7	70.0	At3g02800	821239	phosphatase/ phosphoprotein phosphatase/ protein tyrosine phosphatase	F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FOPBM	O.I.	C.G.	H.G.
28.0	99.7	206.4	At4g25810	828686	XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)	xyloglucan endotransglycosylase-related protein (XTR6)	O.I.	C.G.	H.G.
27.9	99.7	44.1	At5g64870	836610	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPA	O.I.	C.G.	H.G.
27.6	99.7	42.9	At1g14040	837965	-	F:unknown;P:unknown;C:integral to membrane;FMPO	O.I.	C.G.	H.G.
27.6	99.7	29.9	At2g23560	816888	MES7 (METHYL ESTERASE 7)	Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, and methyl IAA esterase activity in vitro. This protein does not act on methyl JA, MeGA4, or MEGA9 in vitro. MES7 appears to be involved in MeSA hydrolysis in planta. Expression of MES7 can restore systemic acquired resistance in SAR-deficient tobacco plants.	O.I.	C.G.	H.G.
27.2	99.7	29.9	At4g22110	828300	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
26.9	99.7	19.7	At4g14650	827115	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:unknown;OMFBPVA	O.I.	C.G.	H.G.
26.7	99.7	19.2	At1g64700	842778	unknown protein	F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.4	99.7	19.9	At5g46590	834702	anac096 (Arabidopsis NAC domain containing protein 96)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
26.3	99.7	144.6	At4g26320	828738	AGP13 (arabinogalactan protein 13)	F:unknown;P:unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
26.1	99.7	92.9	At5g10830	830950	embryo-abundant protein-related	F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA	O.I.	C.G.	H.G.
25.8	99.7	107.1	At1g78100	844146	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
25.8	99.7	38.9	At3g17690	821036	ATCNGC19	member of Cyclic nucleotide gated channel family	O.I.	C.G.	H.G.
25.7	99.7	341.6	At5g64310	836552	AGP1 (ARABINOGALACTAN PROTEIN 1)	Encodes arabinogalactan-protein (AGP1).	O.I.	C.G.	H.G.
25.7	99.7	158.4	At2g36290	818200	hydrolase, alpha/beta fold family protein	F:hydrolase activity;P:biological_process unknown;C:endoplasmic reticulum;BPOFA	O.I.	C.G.	H.G.
25.6	99.7	21.9	At1g55380	841985	DC1 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFVA	O.I.	C.G.	H.G.
25.3	99.6	36.5	At2g35270	818094	DNA-binding protein-related	F:unknown;P:biological_process unknown;C:cellular_component unknown;PMBOFVA	O.I.	C.G.	H.G.
25.2	99.6	338.2	At5g59820	836103	RHL41 (RESPONSIVE TO HIGH LIGHT 41)	Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.	O.I.	C.G.	H.G.
25.1	99.6	281.8	At3g02780	820960	IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2)	Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.	O.I.	C.G.	H.G.
25.1	99.6	34.9	At3g23160	821892	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POB	O.I.	C.G.	H.G.
24.9	99.6	349.1	At1g48600	841281	phosphoethanolamine N-methyltransferase 2, putative (NMT2)	F:methyltransferase activity, phosphoethanolamine N-methyltransferase activity;P:metabolic process;C:unknown;BOFAPMV	O.I.	C.G.	H.G.
24.9	99.6	88.6	At1g28680	839768	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.

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GSM ID	GSM184494
Assay name	Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1
GSE experiment	GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Microarray experiments to specifically-expressed genes

GSM ID GSM184494 Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1 GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

GSM ID GSM184494

Assay name Endodermis&Pericycle root cells 2hr KCl control treated, biological rep1

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root