CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM184492

Assay name Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
240.5 100.0 102.2 At4g16230 827317 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
193.5 100.0 194.0 At5g20110 832133 dynein light chain, putative F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF O.I. C.G. H.G.
188.9 100.0 243.5 At1g19210 838504 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
180.7 100.0 517.1 At1g05575 837061 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
175.2 100.0 75.2 At3g07600 819951 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBMFV O.I. C.G. H.G.
168.4 100.0 285.2 At3g23190 821897 lesion inducing protein-related F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;P O.I. C.G. H.G.
157.3 99.9 107.6 At5g24410 832512 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
142.2 99.9 200.0 At5g22570 832320 WRKY38 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
141.3 99.9 195.1 At1g02810 838078 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
111.7 99.9 82.2 At2g17080 816213 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOFBV O.I. C.G. H.G.
107.9 99.9 92.2 At1g50090 841432 aminotransferase class IV family protein F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
104.6 99.9 19.2 At4g35200 829673 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
100.0 99.9 57.6 At5g48175 834870 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
94.2 99.9 78.1 At3g18710 821402 PUB29 (PLANT U-BOX 29) Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. O.I. C.G. H.G.
88.9 99.9 188.0 At2g30670 817617 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
86.5 99.9 29.9 At2g04680 815011 DC1 domain-containing protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF O.I. C.G. H.G.
86.3 99.9 413.8 At1g01720 839265 ATAF1 Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. O.I. C.G. H.G.
85.2 99.9 432.9 At3g14940 820723 ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3) One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques. O.I. C.G. H.G.
84.3 99.9 49.5 At2g15350 816027 FUT10 (FUCOSYLTRANSFERASE 10) member of Glycosyltransferase Family- 37 O.I. C.G. H.G.
84.3 99.9 38.6 At1g64910 842799 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOF O.I. C.G. H.G.
83.7 99.9 400.4 At3g10720 820241 pectinesterase, putative F:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM O.I. C.G. H.G.
82.1 99.9 222.3 At5g12940 831134 leucine-rich repeat family protein F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA O.I. C.G. H.G.
82.0 99.9 44.3 At1g13430 837903 ST4C (SULFOTRANSFERASE 4C) Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment. O.I. C.G. H.G.
78.8 99.9 714.8 At5g01870 831705 lipid transfer protein, putative Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. O.I. C.G. H.G.
77.7 99.9 12.8 At1g43040 840903 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. C.G. H.G.
75.5 99.9 403.4 At1g30510 839930 ATRFNR2 (ROOT FNR 2) Encodes a root-type ferredoxin:NADP(H) oxidoreductase. O.I. C.G. H.G.
75.4 99.9 132.0 At4g27654 828878 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
74.7 99.9 270.3 At2g47550 819368 pectinesterase family protein F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO O.I. C.G. H.G.
74.1 99.9 32.7 At2g17070 816212 unknown protein F:molecular_function unknown;P:unknown;C:unknown;PMOBF O.I. C.G. H.G.
70.5 99.9 83.0 At3g12230 820403 scpl14 (serine carboxypeptidase-like 14) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
70.0 99.9 53.0 At4g20000 827745 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
69.3 99.9 165.1 At3g10930 820264 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
68.0 99.9 22.5 At2g02610 814790 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
67.6 99.9 29.0 At1g64920 842800 glycosyltransferase family protein F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO O.I. C.G. H.G.
67.0 99.8 32.0 At3g60470 825218 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
65.6 99.8 45.0 At5g52670 835344 heavy-metal-associated domain-containing protein F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P O.I. C.G. H.G.
64.0 99.8 52.0 At5g28610 832960 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB O.I. C.G. H.G.
63.9 99.8 93.0 At1g55120 841955 ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5) Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity. O.I. C.G. H.G.
63.3 99.8 39.6 At1g19025 838484 DNA cross-link repair protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA O.I. C.G. H.G.
58.6 99.8 45.3 At5g57510 835855 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
58.5 99.8 5.0 At3g28380 822467 PGP17 (P-GLYCOPROTEIN 17) F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
56.3 99.8 17.9 At1g73510 843686 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
56.0 99.8 153.4 At3g02840 821225 immediate-early fungal elicitor family protein F:binding;P:response to other organism, response to ozone;C:unknown;PO O.I. C.G. H.G.
55.7 99.8 53.9 At3g14370 820658 WAG2 The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons. O.I. C.G. H.G.
55.4 99.8 28.0 At5g43030 834318 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO O.I. C.G. H.G.
54.5 99.8 234.9 At5g40850 834085 UPM1 (UROPHORPHYRIN METHYLASE 1) Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. O.I. C.G. H.G.
54.4 99.8 460.3 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB O.I. C.G. H.G.
53.5 99.8 123.2 At1g35910 840493 trehalose-6-phosphate phosphatase, putative F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA O.I. C.G. H.G.
53.2 99.8 79.6 At3g53600 824528 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMF O.I. C.G. H.G.
53.0 99.8 12.6 At5g54030 835486 DC1 domain-containing protein F:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO O.I. C.G. H.G.
52.1 99.8 41.4 At4g22110 828300 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV O.I. C.G. H.G.
52.1 99.8 27.6 At4g25560 828661 AtMYB18 (myb domain protein 18) Member of the R2R3 factor gene family. O.I. C.G. H.G.
51.6 99.8 417.6 At5g05410 830424 DREB2A Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes. O.I. C.G. H.G.
51.0 99.8 115.6 At5g66650 836797 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOA O.I. C.G. H.G.
49.8 99.8 195.9 At2g39350 818520 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPV O.I. C.G. H.G.
49.8 99.8 133.5 At2g44840 819093 ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13) encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
49.8 99.8 44.2 At3g31415 822906 terpene synthase/cyclase family protein F:lyase activity, magnesium ion binding;P:unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
49.2 99.8 23.1 At1g66450 842963 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
48.9 99.8 48.4 At3g50640 824227 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
48.5 99.8 500.0 At1g27730 839666 STZ (salt tolerance zinc finger) Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress. O.I. C.G. H.G.
48.4 99.8 220.6 At3g43800 823491 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
48.1 99.8 33.4 At1g26960 839587 AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. O.I. C.G. H.G.
47.8 99.8 48.3 At5g38540 833842 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
47.7 99.8 67.8 At3g54770 824642 RNA recognition motif (RRM)-containing protein F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
47.6 99.8 154.4 At4g17490 827463 ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6) Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. O.I. C.G. H.G.
46.7 99.8 143.4 At3g62270 825400 anion exchange family protein F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV O.I. C.G. H.G.
46.2 99.8 42.4 At2g05530 815102 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA O.I. C.G. H.G.
44.7 99.8 162.6 At2g30040 817555 MAPKKK14 member of MEKK subfamily O.I. C.G. H.G.
43.6 99.8 120.0 At5g10830 830950 embryo-abundant protein-related F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA O.I. C.G. H.G.
43.4 99.8 22.1 At5g43690 834389 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF O.I. C.G. H.G.
42.8 99.8 39.5 At3g01220 821232 ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20) Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity. O.I. C.G. H.G.
42.8 99.8 35.0 At5g59930 836115 DC1 domain-containing protein / UV-B light-insensitive protein, putative F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POMF O.I. C.G. H.G.
42.7 99.8 332.5 At2g40000 818588 HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) F:molecular_function unknown;P:response to oxidative stress, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
42.5 99.8 35.6 At3g11580 820331 DNA-binding protein, putative F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P O.I. C.G. H.G.
42.3 99.8 351.4 At4g21830 828271 methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein F:peptide-methionine-(S)-S-oxide reductase activity;P:response to singlet oxygen;C:cellular_component unknown;OBMPFAV O.I. C.G. H.G.
42.2 99.8 121.8 At3g52450 824410 PUB22 (PLANT U-BOX 22) Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. O.I. C.G. H.G.
41.6 99.8 125.8 At5g60950 836216 COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR) F:unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
41.1 99.8 26.9 At2g02630 814792 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
40.6 99.8 167.7 At3g61190 825291 BAP1 (BON ASSOCIATION PROTEIN 1) Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis. O.I. C.G. H.G.
40.4 99.8 101.8 At5g64905 836614 PROPEP3 (Elicitor peptide 3 precursor) F:molecular_function unknown;P:defense response, response to salicylic acid stimulus;C:cellular_component unknown;PM O.I. C.G. H.G.
40.3 99.8 121.0 At1g13300 837890 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF O.I. C.G. H.G.
40.1 99.8 84.9 At1g62800 842579 ASP4 (ASPARTATE AMINOTRANSFERASE 4) Encodes aspartate aminotransferase (Asp4). O.I. C.G. H.G.
39.7 99.8 815.4 At1g77120 844047 ADH1 (ALCOHOL DEHYDROGENASE 1) Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. O.I. C.G. H.G.
39.5 99.8 62.3 At5g41280 834129 - F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;P O.I. C.G. H.G.
39.2 99.8 140.3 At2g22480 816781 PFK5 (PHOSPHOFRUCTOKINASE 5) F:6-phosphofructokinase activity;P:glycolysis;C:6-phosphofructokinase complex, chloroplast;BOMFPAV O.I. C.G. H.G.
38.7 99.8 191.9 At3g11340 820307 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF O.I. C.G. H.G.
38.7 99.8 41.0 At5g54040 835487 DC1 domain-containing protein F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOF O.I. C.G. H.G.
38.6 99.8 25.4 At1g59940 842288 ARR3 (RESPONSE REGULATOR 3) Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner. O.I. C.G. H.G.
38.6 99.8 14.5 At1g28170 839711 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF O.I. C.G. H.G.
38.0 99.8 29.0 At5g60770 836198 ATNRT2.4 member of High affinity nitrate transporter family O.I. C.G. H.G.
37.7 99.7 86.7 At1g72360 843568 ethylene-responsive element-binding protein, putative encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. O.I. C.G. H.G.
37.5 99.7 8.7 At3g50170 824179 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
37.1 99.7 156.4 At1g22190 838824 AP2 domain-containing transcription factor, putative F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POVB O.I. C.G. H.G.
36.7 99.7 116.5 At1g59590 842249 ZCF37 ZCF37 mRNA, complete cds O.I. C.G. H.G.
36.6 99.7 145.2 At1g74930 843832 ORA47 encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. O.I. C.G. H.G.
36.3 99.7 7.6 At3g59130 825082 - F:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;POM O.I. C.G. H.G.
36.1 99.7 295.7 At1g80840 844423 WRKY40 Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. O.I. C.G. H.G.
35.8 99.7 90.9 At5g20400 832162 oxidoreductase, 2OG-Fe(II) oxygenase family protein encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. O.I. C.G. H.G.
35.6 99.7 255.7 At3g19390 821473 cysteine proteinase, putative / thiol protease, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF O.I. C.G. H.G.
35.5 99.7 10.3 At4g35210 829674 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
240.5	100.0	102.2	At4g16230	827317	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
193.5	100.0	194.0	At5g20110	832133	dynein light chain, putative	F:microtubule motor activity;P:microtubule-based process;C:microtubule associated complex;MOPF	O.I.	C.G.	H.G.
188.9	100.0	243.5	At1g19210	838504	AP2 domain-containing transcription factor, putative	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
180.7	100.0	517.1	At1g05575	837061	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
175.2	100.0	75.2	At3g07600	819951	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;POBMFV	O.I.	C.G.	H.G.
168.4	100.0	285.2	At3g23190	821897	lesion inducing protein-related	F:molecular_function unknown;P:biological_process unknown;C:endoplasmic reticulum;P	O.I.	C.G.	H.G.
157.3	99.9	107.6	At5g24410	832512	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
142.2	99.9	200.0	At5g22570	832320	WRKY38	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
141.3	99.9	195.1	At1g02810	838078	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
111.7	99.9	82.2	At2g17080	816213	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PMOFBV	O.I.	C.G.	H.G.
107.9	99.9	92.2	At1g50090	841432	aminotransferase class IV family protein	F:branched-chain-amino-acid transaminase activity, catalytic activity;P:branched chain family amino acid metabolic process, metabolic process;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
104.6	99.9	19.2	At4g35200	829673	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
100.0	99.9	57.6	At5g48175	834870	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
94.2	99.9	78.1	At3g18710	821402	PUB29 (PLANT U-BOX 29)	Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.	O.I.	C.G.	H.G.
88.9	99.9	188.0	At2g30670	817617	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
86.5	99.9	29.9	At2g04680	815011	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOF	O.I.	C.G.	H.G.
86.3	99.9	413.8	At1g01720	839265	ATAF1	Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.	O.I.	C.G.	H.G.
85.2	99.9	432.9	At3g14940	820723	ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)	One of four genes encoding phosphoenolpyruvate carboxylase, its mRNA is most abundantly expressed in roots and siliques.	O.I.	C.G.	H.G.
84.3	99.9	49.5	At2g15350	816027	FUT10 (FUCOSYLTRANSFERASE 10)	member of Glycosyltransferase Family- 37	O.I.	C.G.	H.G.
84.3	99.9	38.6	At1g64910	842799	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBOF	O.I.	C.G.	H.G.
83.7	99.9	400.4	At3g10720	820241	pectinesterase, putative	F:pectinesterase activity;P:cell wall modification;C:cell wall, plant-type cell wall;PBFM	O.I.	C.G.	H.G.
82.1	99.9	222.3	At5g12940	831134	leucine-rich repeat family protein	F:protein binding;P:signal transduction;C:endomembrane system;PMOBFA	O.I.	C.G.	H.G.
82.0	99.9	44.3	At1g13430	837903	ST4C (SULFOTRANSFERASE 4C)	Encodes a sulfotransferase. Unlike the related ST4A protein (At2g14920), in vitro experiements show that this enzyme does not act brassinosteroids. ST4C is expressed in the roots and transcript levels rise in response to cytokinin treatment.	O.I.	C.G.	H.G.
78.8	99.9	714.8	At5g01870	831705	lipid transfer protein, putative	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.	O.I.	C.G.	H.G.
77.7	99.9	12.8	At1g43040	840903	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P	O.I.	C.G.	H.G.
75.5	99.9	403.4	At1g30510	839930	ATRFNR2 (ROOT FNR 2)	Encodes a root-type ferredoxin:NADP(H) oxidoreductase.	O.I.	C.G.	H.G.
75.4	99.9	132.0	At4g27654	828878	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
74.7	99.9	270.3	At2g47550	819368	pectinesterase family protein	F:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBFMO	O.I.	C.G.	H.G.
74.1	99.9	32.7	At2g17070	816212	unknown protein	F:molecular_function unknown;P:unknown;C:unknown;PMOBF	O.I.	C.G.	H.G.
70.5	99.9	83.0	At3g12230	820403	scpl14 (serine carboxypeptidase-like 14)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
70.0	99.9	53.0	At4g20000	827745	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
69.3	99.9	165.1	At3g10930	820264	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
68.0	99.9	22.5	At2g02610	814790	DC1 domain-containing protein	F:unknown;P:unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
67.6	99.9	29.0	At1g64920	842800	glycosyltransferase family protein	F:transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBFO	O.I.	C.G.	H.G.
67.0	99.8	32.0	At3g60470	825218	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
65.6	99.8	45.0	At5g52670	835344	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;P	O.I.	C.G.	H.G.
64.0	99.8	52.0	At5g28610	832960	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVB	O.I.	C.G.	H.G.
63.9	99.8	93.0	At1g55120	841955	ATFRUCT5 (BETA-FRUCTOFURANOSIDASE 5)	Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.	O.I.	C.G.	H.G.
63.3	99.8	39.6	At1g19025	838484	DNA cross-link repair protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPA	O.I.	C.G.	H.G.
58.6	99.8	45.3	At5g57510	835855	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
58.5	99.8	5.0	At3g28380	822467	PGP17 (P-GLYCOPROTEIN 17)	F:ATPase activity, coupled to transmembrane movement of substances, nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:transport;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
56.3	99.8	17.9	At1g73510	843686	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
56.0	99.8	153.4	At3g02840	821225	immediate-early fungal elicitor family protein	F:binding;P:response to other organism, response to ozone;C:unknown;PO	O.I.	C.G.	H.G.
55.7	99.8	53.9	At3g14370	820658	WAG2	The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.	O.I.	C.G.	H.G.
55.4	99.8	28.0	At5g43030	834318	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
54.5	99.8	234.9	At5g40850	834085	UPM1 (UROPHORPHYRIN METHYLASE 1)	Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.	O.I.	C.G.	H.G.
54.4	99.8	460.3	At4g30170	829140	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB	O.I.	C.G.	H.G.
53.5	99.8	123.2	At1g35910	840493	trehalose-6-phosphate phosphatase, putative	F:catalytic activity, trehalose-phosphatase activity;P:trehalose biosynthetic process, metabolic process;C:unknown;BPMOFA	O.I.	C.G.	H.G.
53.2	99.8	79.6	At3g53600	824528	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:response to chitin, regulation of transcription;C:intracellular;PMF	O.I.	C.G.	H.G.
53.0	99.8	12.6	At5g54030	835486	DC1 domain-containing protein	F:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.
52.1	99.8	41.4	At4g22110	828300	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, zinc ion binding, catalytic activity;P:oxidation reduction, metabolic process;C:cellular_component unknown;BOPFMAV	O.I.	C.G.	H.G.
52.1	99.8	27.6	At4g25560	828661	AtMYB18 (myb domain protein 18)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
51.6	99.8	417.6	At5g05410	830424	DREB2A	Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress�inducible genes.	O.I.	C.G.	H.G.
51.0	99.8	115.6	At5g66650	836797	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFOA	O.I.	C.G.	H.G.
49.8	99.8	195.9	At2g39350	818520	ABC transporter family protein	F:ATPase activity, coupled to transmembrane movement of substances;P:response to nematode;C:plasma membrane;BOMAFPV	O.I.	C.G.	H.G.
49.8	99.8	133.5	At2g44840	819093	ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)	encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
49.8	99.8	44.2	At3g31415	822906	terpene synthase/cyclase family protein	F:lyase activity, magnesium ion binding;P:unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
49.2	99.8	23.1	At1g66450	842963	DC1 domain-containing protein	F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
48.9	99.8	48.4	At3g50640	824227	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
48.5	99.8	500.0	At1g27730	839666	STZ (salt tolerance zinc finger)	Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.	O.I.	C.G.	H.G.
48.4	99.8	220.6	At3g43800	823491	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
48.1	99.8	33.4	At1g26960	839587	AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.	O.I.	C.G.	H.G.
47.8	99.8	48.3	At5g38540	833842	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
47.7	99.8	67.8	At3g54770	824642	RNA recognition motif (RRM)-containing protein	F:RNA binding, nucleotide binding, nucleic acid binding;P:unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
47.6	99.8	154.4	At4g17490	827463	ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)	Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.	O.I.	C.G.	H.G.
46.7	99.8	143.4	At3g62270	825400	anion exchange family protein	F:anion exchanger activity;P:anion transport;C:integral to membrane, membrane;MFPOBV	O.I.	C.G.	H.G.
46.2	99.8	42.4	At2g05530	815102	glycine-rich protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBPOFVA	O.I.	C.G.	H.G.
44.7	99.8	162.6	At2g30040	817555	MAPKKK14	member of MEKK subfamily	O.I.	C.G.	H.G.
43.6	99.8	120.0	At5g10830	830950	embryo-abundant protein-related	F:methyltransferase activity;P:metabolic process;C:cellular_component unknown;BPFMOA	O.I.	C.G.	H.G.
43.4	99.8	22.1	At5g43690	834389	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPOBF	O.I.	C.G.	H.G.
42.8	99.8	39.5	At3g01220	821232	ATHB20 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 20)	Encodes a homeodomain leucine zipper class I (HD-Zip I) protein, its expression is auxin-inducible and dependent on MP gene activity.	O.I.	C.G.	H.G.
42.8	99.8	35.0	At5g59930	836115	DC1 domain-containing protein / UV-B light-insensitive protein, putative	F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;POMF	O.I.	C.G.	H.G.
42.7	99.8	332.5	At2g40000	818588	HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2)	F:molecular_function unknown;P:response to oxidative stress, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
42.5	99.8	35.6	At3g11580	820331	DNA-binding protein, putative	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;P	O.I.	C.G.	H.G.
42.3	99.8	351.4	At4g21830	828271	methionine sulfoxide reductase domain-containing protein / SeIR domain-containing protein	F:peptide-methionine-(S)-S-oxide reductase activity;P:response to singlet oxygen;C:cellular_component unknown;OBMPFAV	O.I.	C.G.	H.G.
42.2	99.8	121.8	At3g52450	824410	PUB22 (PLANT U-BOX 22)	Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.	O.I.	C.G.	H.G.
41.6	99.8	125.8	At5g60950	836216	COBL5 (COBRA-LIKE PROTEIN 5 PRECURSOR)	F:unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
41.1	99.8	26.9	At2g02630	814792	DC1 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
40.6	99.8	167.7	At3g61190	825291	BAP1 (BON ASSOCIATION PROTEIN 1)	Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis.	O.I.	C.G.	H.G.
40.4	99.8	101.8	At5g64905	836614	PROPEP3 (Elicitor peptide 3 precursor)	F:molecular_function unknown;P:defense response, response to salicylic acid stimulus;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
40.3	99.8	121.0	At1g13300	837890	myb family transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;POVBMF	O.I.	C.G.	H.G.
40.1	99.8	84.9	At1g62800	842579	ASP4 (ASPARTATE AMINOTRANSFERASE 4)	Encodes aspartate aminotransferase (Asp4).	O.I.	C.G.	H.G.
39.7	99.8	815.4	At1g77120	844047	ADH1 (ALCOHOL DEHYDROGENASE 1)	Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.	O.I.	C.G.	H.G.
39.5	99.8	62.3	At5g41280	834129	-	F:molecular_function unknown;P:biological_process unknown;C:anchored to plasma membrane, anchored to membrane;P	O.I.	C.G.	H.G.
39.2	99.8	140.3	At2g22480	816781	PFK5 (PHOSPHOFRUCTOKINASE 5)	F:6-phosphofructokinase activity;P:glycolysis;C:6-phosphofructokinase complex, chloroplast;BOMFPAV	O.I.	C.G.	H.G.
38.7	99.8	191.9	At3g11340	820307	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity;P:metabolic process;C:endomembrane system;PMBVOF	O.I.	C.G.	H.G.
38.7	99.8	41.0	At5g54040	835487	DC1 domain-containing protein	F:unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOF	O.I.	C.G.	H.G.
38.6	99.8	25.4	At1g59940	842288	ARR3 (RESPONSE REGULATOR 3)	Type A response regulator highly similar to bacterial two-component response regulators. Rapidly induced by cytokinin. Involved in red-light signaling. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.	O.I.	C.G.	H.G.
38.6	99.8	14.5	At1g28170	839711	sulfotransferase family protein	F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MOPBF	O.I.	C.G.	H.G.
38.0	99.8	29.0	At5g60770	836198	ATNRT2.4	member of High affinity nitrate transporter family	O.I.	C.G.	H.G.
37.7	99.7	86.7	At1g72360	843568	ethylene-responsive element-binding protein, putative	encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.	O.I.	C.G.	H.G.
37.5	99.7	8.7	At3g50170	824179	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
37.1	99.7	156.4	At1g22190	838824	AP2 domain-containing transcription factor, putative	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;POVB	O.I.	C.G.	H.G.
36.7	99.7	116.5	At1g59590	842249	ZCF37	ZCF37 mRNA, complete cds	O.I.	C.G.	H.G.
36.6	99.7	145.2	At1g74930	843832	ORA47	encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.	O.I.	C.G.	H.G.
36.3	99.7	7.6	At3g59130	825082	-	F:unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
36.1	99.7	295.7	At1g80840	844423	WRKY40	Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Coexpression with WRKY18 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.	O.I.	C.G.	H.G.
35.8	99.7	90.9	At5g20400	832162	oxidoreductase, 2OG-Fe(II) oxygenase family protein	encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus.	O.I.	C.G.	H.G.
35.6	99.7	255.7	At3g19390	821473	cysteine proteinase, putative / thiol protease, putative	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF	O.I.	C.G.	H.G.
35.5	99.7	10.3	At4g35210	829674	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO	O.I.	C.G.	H.G.

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GSM ID	GSM184492
Assay name	Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2
GSE experiment	GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

Microarray experiments to specifically-expressed genes

GSM ID GSM184492 Assay name Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2 GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root

GSM ID GSM184492

Assay name Epidermis&Cortex root cells 2hr continuous KNO3 treated, biological rep2

GSE experiment GSE7631: Cell-specific nitrogen responses in the Arabidopsis root