CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM183516

Assay name MYB51_OE_rep1

GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
87.1 99.9 127.9 At1g18570 838438 MYB51 (MYB DOMAIN PROTEIN 51) Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis. O.I. C.G. H.G.
64.8 99.8 119.6 At1g12860 837843 SCRM2 (SCREAM 2) Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation. O.I. C.G. H.G.
62.5 99.8 34.7 At1g34245 840324 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
59.2 99.8 145.4 At4g14680 827118 APS3 ATP sulfurylase O.I. C.G. H.G.
58.9 99.8 180.0 At2g22330 816765 CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
56.5 99.8 44.6 At4g38950 830050 kinesin motor family protein F:microtubule motor activity, ATP binding;P:microtubule-based process, microtubule-based movement;C:microtubule associated complex;MOPF O.I. C.G. H.G.
48.7 99.8 115.8 At5g26220 832691 ChaC-like family protein F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP O.I. C.G. H.G.
46.5 99.8 91.3 At5g01500 831861 mitochondrial substrate carrier family protein encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover O.I. C.G. H.G.
42.0 99.8 17.5 At4g31805 829309 WRKY family transcription factor F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;PMOB O.I. C.G. H.G.
35.5 99.7 225.7 At5g63980 836519 SAL1 Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. O.I. C.G. H.G.
35.4 99.7 245.7 At4g39940 830153 AKN2 (APS-kinase 2) adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete O.I. C.G. H.G.
30.8 99.7 83.9 At5g47870 834838 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO O.I. C.G. H.G.
30.0 99.7 64.8 At5g10690 830933 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein F:unknown;P:biological_process unknown;C:chloroplast;POMFBA O.I. C.G. H.G.
28.4 99.7 65.9 At1g60590 842353 polygalacturonase, putative / pectinase, putative F:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVA O.I. C.G. H.G.
25.8 99.7 74.4 At1g30520 839932 AAE14 (Acyl-Activating Enzyme 14) Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal. O.I. C.G. H.G.
25.6 99.7 20.4 At4g19020 827640 CMT2 (chromomethylase 2) F:chromatin binding, DNA binding;P:chromatin assembly or disassembly, DNA methylation;C:chromatin, nucleus;BOMPFAV O.I. C.G. H.G.
25.0 99.6 27.6 At1g80080 844348 TMM (TOO MANY MOUTHS) Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. O.I. C.G. H.G.
23.7 99.6 33.6 At5g57590 835863 BIO1 (biotin auxotroph 1) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. O.I. C.G. H.G.
23.0 99.6 199.4 At5g17990 831666 TRP1 (tryptophan biosynthesis 1) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. O.I. C.G. H.G.
21.2 99.6 12.9 At4g16920 827400 disease resistance protein (TIR-NBS-LRR class), putative F:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVA O.I. C.G. H.G.
21.1 99.6 42.6 At1g76110 843943 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MOFP O.I. C.G. H.G.
20.9 99.6 13.1 At1g11300 837672 ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
20.6 99.6 14.2 At5g60880 836209 unknown protein F:unknown;P:unknown;C:cellular_component unknown;OPMF O.I. C.G. H.G.
20.1 99.6 34.2 At4g30720 829195 electron carrier/ oxidoreductase F:electron carrier activity, oxidoreductase activity;P:unknown;C:chloroplast;BOAPF O.I. C.G. H.G.
19.7 99.6 58.9 At5g24760 832545 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV O.I. C.G. H.G.
19.3 99.6 42.7 At4g33000 829437 CBL10 (CALCINEURIN B-LIKE 10) Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. O.I. C.G. H.G.
19.1 99.6 193.6 At2g04400 814980 indole-3-glycerol phosphate synthase (IGPS) F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP O.I. C.G. H.G.
19.1 99.6 174.4 At5g05730 830457 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. O.I. C.G. H.G.
19.1 99.6 157.2 At1g12800 837836 S1 RNA-binding domain-containing protein F:RNA binding;P:unknown;C:chloroplast;BOMFPAV O.I. C.G. H.G.
18.9 99.5 43.4 At5g64050 836526 ERS (GLUTAMATE TRNA SYNTHETASE) Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. O.I. C.G. H.G.
18.8 99.5 14.7 At2g45870 819195 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BFPO O.I. C.G. H.G.
18.5 99.5 52.8 At5g16715 831533 EMB2247 (embryo defective 2247) F:valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, tRNA aminoacylation for protein translation;C:chloroplast stroma, chloroplast;OBMAFP O.I. C.G. H.G.
18.4 99.5 19.7 At5g46880 834733 HB-7 (HOMEOBOX-7) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOB O.I. C.G. H.G.
17.8 99.5 47.3 At3g49260 824087 iqd21 (IQ-domain 21) F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOFB O.I. C.G. H.G.
17.5 99.5 195.0 At3g54640 824629 TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN) Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2). O.I. C.G. H.G.
16.9 99.5 24.7 At3g63510 825526 FAD binding / catalytic/ tRNA dihydrouridine synthase F:tRNA dihydrouridine synthase activity, FAD binding, catalytic activity;P:regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process;C:unknown;BOMFPA O.I. C.G. H.G.
16.0 99.5 45.0 At1g14030 837964 ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative F:[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity;P:unknown;C:chloroplast, chloroplast stroma;MPFO O.I. C.G. H.G.
16.0 99.5 23.3 At5g38140 833794 NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12) F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFO O.I. C.G. H.G.
15.9 99.5 84.9 At1g18590 838440 SOT17 (SULFOTRANSFERASE 17) encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates. O.I. C.G. H.G.
15.3 99.4 22.6 At3g50240 824186 KICP-02 Encodes a kinesin-related protein. O.I. C.G. H.G.
15.2 99.4 60.0 At3g01550 821114 PPT2 (PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2) F:antiporter activity, triose-phosphate transmembrane transporter activity;P:triose phosphate transport, transport;C:integral to membrane, chloroplast, membrane;PMFOBA O.I. C.G. H.G.
15.2 99.4 49.2 At4g26555 828762 immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:chloroplast;BOPMFA O.I. C.G. H.G.
15.0 99.4 42.1 At1g64150 842719 unknown protein F:unknown;P:unknown;C:chloroplast, membrane;BOMFPA O.I. C.G. H.G.
14.9 99.4 160.9 At1g08520 837374 CHLD F:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVA O.I. C.G. H.G.
14.8 99.4 52.7 At1g71720 843502 S1 RNA-binding domain-containing protein F:RNA binding;P:unknown;C:chloroplast;BOPMAF O.I. C.G. H.G.
14.7 99.4 24.3 At5g15310 831383 ATMYB16 (MYB DOMAIN PROTEIN 16) Member of the R2R3 factor gene family. O.I. C.G. H.G.
14.6 99.4 102.2 At1g01790 837332 KEA1 (K EFFLUX ANTIPORTER 1) K efflux antiporter KEA1 O.I. C.G. H.G.
14.5 99.4 116.8 At3g14930 820722 HEME1 F:uroporphyrinogen decarboxylase activity;P:porphyrin biosynthetic process;C:chloroplast stroma, chloroplast;OBMFAP O.I. C.G. H.G.
14.4 99.4 222.0 At5g48490 834905 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
14.4 99.4 63.5 At1g15290 838097 binding F:binding;P:biological_process unknown;C:cellular_component unknown;MBOFPAV O.I. C.G. H.G.
14.3 99.4 11.6 At4g13410 826972 ATCSLA15 encodes a gene similar to cellulose synthase O.I. C.G. H.G.
14.2 99.4 38.1 At5g27730 832835 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMP O.I. C.G. H.G.
14.1 99.4 34.9 At3g13180 820508 NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein F:RNA binding;P:regulation of transcription, DNA-dependent;C:chloroplast;BOMFAP O.I. C.G. H.G.
14.1 99.4 20.4 At2g21370 816675 xylulose kinase, putative F:xylulokinase activity, phosphotransferase activity, alcohol group as acceptor;P:carbohydrate metabolic process, xylulose catabolic process;C:chloroplast, cytoplasm;BOPFAM O.I. C.G. H.G.
13.6 99.4 39.0 At1g54820 841921 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA O.I. C.G. H.G.
13.4 99.4 70.8 At3g59780 825147 - F:molecular_function unknown;P:biological_process unknown;C:nucleus, chloroplast;OBMFPV O.I. C.G. H.G.
13.1 99.4 22.1 At2g32640 817824 unknown protein F:unknown;P:unknown;C:chloroplast;BPO O.I. C.G. H.G.
13.0 99.4 36.6 At3g49140 824075 - F:unknown;P:unknown;C:unknown;PBMOFVA O.I. C.G. H.G.
12.8 99.3 97.1 At5g44720 834501 molybdenum cofactor sulfurase family protein F:molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMFOPA O.I. C.G. H.G.
12.8 99.3 76.2 At4g39970 830158 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAV O.I. C.G. H.G.
12.7 99.3 36.3 At2g30695 817620 - F:molecular_function unknown;P:protein folding, protein transport;C:chloroplast stroma, chloroplast;BOP O.I. C.G. H.G.
12.6 99.3 89.9 At1g16080 838178 unknown protein F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB O.I. C.G. H.G.
12.5 99.3 138.7 At2g29650 817515 PHT4 Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane. O.I. C.G. H.G.
12.5 99.3 96.6 At3g54500 824615 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB O.I. C.G. H.G.
12.5 99.3 25.4 At2g45270 819135 glycoprotease M22 family protein F:endopeptidase activity, metalloendopeptidase activity, zinc ion binding;P:proteolysis;C:unknown;OBMFAP O.I. C.G. H.G.
12.3 99.3 138.1 At4g39950 830154 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
12.1 99.3 24.8 At2g26550 817196 HO2 (HEME OXYGENASE 2) encodes a heme oxygenase that catalyzes the oxidation of heme to biliverdin IXalpha, CO and Fe(2+), a committed step in the biosynthesis of the phytochrome chromophore phytochromobilin. O.I. C.G. H.G.
12.0 99.3 35.9 At3g03710 821181 RIF10 (resistant to inhibition with FSM 10) Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings. O.I. C.G. H.G.
11.8 99.3 181.5 At1g43310 840932 triose phosphate/phosphate translocator-related F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POM O.I. C.G. H.G.
11.8 99.3 102.5 At4g18970 827632 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
11.7 99.3 40.4 At4g04850 825822 KEA3 member of Putative potassium transporter family O.I. C.G. H.G.
11.7 99.3 28.9 At2g38780 818460 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM O.I. C.G. H.G.
11.6 99.3 69.1 At5g63050 836425 EMB2759 (embryo defective 2759) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;P O.I. C.G. H.G.
11.6 99.3 50.7 At2g25840 817126 OVA4 (ovule abortion 4) F:nucleotide binding, aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, ATP binding;P:N-terminal protein myristoylation, ovule development, tRNA aminoacylation for protein translation;C:mitochondrion, chloroplast;OBMFAP O.I. C.G. H.G.
11.6 99.3 25.7 At1g05230 839256 HDG2 (HOMEODOMAIN GLABROUS 2) Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. O.I. C.G. H.G.
11.3 99.3 135.0 At2g47940 819406 DEGP2 Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product. O.I. C.G. H.G.
11.3 99.3 79.3 At1g60550 842350 ECHID (ENOYL-COA HYDRATASE/ISOMERASE D) F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPA O.I. C.G. H.G.
11.3 99.3 17.1 At1g72640 843596 binding / catalytic F:binding, catalytic activity;P:metabolic process;C:chloroplast thylakoid membrane, chloroplast;BPOMA O.I. C.G. H.G.
11.2 99.2 103.3 At4g24750 828577 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOA O.I. C.G. H.G.
11.2 99.2 47.5 At5g45040 834535 cytochrome c6 (ATC6) F:electron carrier activity, iron ion binding, heme binding;P:unknown;C:unknown;BOP O.I. C.G. H.G.
11.2 99.2 16.3 At2g07680 815414 ATMRP11 member of MRP subfamily O.I. C.G. H.G.
11.1 99.2 73.3 At4g21750 828263 ATML1 (MERISTEM LAYER 1) Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development. O.I. C.G. H.G.
11.1 99.2 72.1 At3g02600 821299 LPP3 (LIPID PHOSPHATE PHOSPHATASE 3) Encodes phosphatidic acid phosphatase. Expressed during germination. O.I. C.G. H.G.
11.1 99.2 36.3 At1g70610 843398 ATTAP1 member of TAP subfamily O.I. C.G. H.G.
10.9 99.2 29.7 At4g18820 827616 ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding F:nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication;C:plasma membrane;BOMFAPV O.I. C.G. H.G.
10.8 99.2 71.8 At5g22640 832327 emb1211 (embryo defective 1211) F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;OMFBPVA O.I. C.G. H.G.
10.8 99.2 20.8 At2g22650 816796 FAD-dependent oxidoreductase family protein F:oxidoreductase activity;P:unknown;C:unknown;BOPFA O.I. C.G. H.G.
10.4 99.2 37.1 At2g26540 817195 HEMD F:uroporphyrinogen-III synthase activity;P:tetrapyrrole biosynthetic process, porphyrin biosynthetic process;C:chloroplast;BOPAF O.I. C.G. H.G.
10.4 99.2 20.2 At1g69523 843286 UbiE/COQ5 methyltransferase family protein F:methyltransferase activity;P:metabolic process;C:chloroplast;BOFAMP O.I. C.G. H.G.
10.4 99.2 15.7 At5g24000 832465 unknown protein F:unknown;P:unknown;C:chloroplast;BOPA O.I. C.G. H.G.
10.4 99.2 12.9 At2g39250 818510 SNZ (SCHNARCHZAPFEN) Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering. O.I. C.G. H.G.
10.3 99.2 36.9 At4g24090 828509 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPFOMA O.I. C.G. H.G.
10.3 99.2 30.9 At1g10910 837634 - F:unknown;P:biological_process unknown;C:unknown;POMFBA O.I. C.G. H.G.
10.3 99.2 27.0 At3g13490 820551 OVA5 (OVULE ABORTION 5) Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. O.I. C.G. H.G.
10.2 99.2 31.7 At1g19715 838560 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOB O.I. C.G. H.G.
10.1 99.2 98.8 At1g24807 839085 anthranilate synthase beta subunit, putative F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMP O.I. C.G. H.G.
10.1 99.2 52.6 At1g62250 842522 unknown protein F:unknown;P:unknown;C:chloroplast;P O.I. C.G. H.G.
10.1 99.2 11.2 At5g53210 835402 SPCH (SPEECHLESS) Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. O.I. C.G. H.G.
10.0 99.2 130.7 At2g39470 818532 PPL2 (PsbP-like protein 2) F:calcium ion binding;P:photosynthesis;C:in 6 components;PBO O.I. C.G. H.G.
10.0 99.2 80.4 At3g26744 822287 ICE1 (INDUCER OF CBF EXPRESSION 1) Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
87.1	99.9	127.9	At1g18570	838438	MYB51 (MYB DOMAIN PROTEIN 51)	Encodes a member of the R2R3-MYB transcription family. Involved in indole glucosinolate biosynthesis.	O.I.	C.G.	H.G.
64.8	99.8	119.6	At1g12860	837843	SCRM2 (SCREAM 2)	Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.	O.I.	C.G.	H.G.
62.5	99.8	34.7	At1g34245	840324	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
59.2	99.8	145.4	At4g14680	827118	APS3	ATP sulfurylase	O.I.	C.G.	H.G.
58.9	99.8	180.0	At2g22330	816765	CYP79B3	Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
56.5	99.8	44.6	At4g38950	830050	kinesin motor family protein	F:microtubule motor activity, ATP binding;P:microtubule-based process, microtubule-based movement;C:microtubule associated complex;MOPF	O.I.	C.G.	H.G.
48.7	99.8	115.8	At5g26220	832691	ChaC-like family protein	F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP	O.I.	C.G.	H.G.
46.5	99.8	91.3	At5g01500	831861	mitochondrial substrate carrier family protein	encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover	O.I.	C.G.	H.G.
42.0	99.8	17.5	At4g31805	829309	WRKY family transcription factor	F:transcription factor activity;P:regulation of transcription, DNA-dependent;C:unknown;PMOB	O.I.	C.G.	H.G.
35.5	99.7	225.7	At5g63980	836519	SAL1	Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.	O.I.	C.G.	H.G.
35.4	99.7	245.7	At4g39940	830153	AKN2 (APS-kinase 2)	adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete	O.I.	C.G.	H.G.
30.8	99.7	83.9	At5g47870	834838	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
30.0	99.7	64.8	At5g10690	830933	pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein	F:unknown;P:biological_process unknown;C:chloroplast;POMFBA	O.I.	C.G.	H.G.
28.4	99.7	65.9	At1g60590	842353	polygalacturonase, putative / pectinase, putative	F:polygalacturonase activity;P:carbohydrate metabolic process;C:unknown;FPBMOVA	O.I.	C.G.	H.G.
25.8	99.7	74.4	At1g30520	839932	AAE14 (Acyl-Activating Enzyme 14)	Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.	O.I.	C.G.	H.G.
25.6	99.7	20.4	At4g19020	827640	CMT2 (chromomethylase 2)	F:chromatin binding, DNA binding;P:chromatin assembly or disassembly, DNA methylation;C:chromatin, nucleus;BOMPFAV	O.I.	C.G.	H.G.
25.0	99.6	27.6	At1g80080	844348	TMM (TOO MANY MOUTHS)	Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.	O.I.	C.G.	H.G.
23.7	99.6	33.6	At5g57590	835863	BIO1 (biotin auxotroph 1)	Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.	O.I.	C.G.	H.G.
23.0	99.6	199.4	At5g17990	831666	TRP1 (tryptophan biosynthesis 1)	Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.	O.I.	C.G.	H.G.
21.2	99.6	12.9	At4g16920	827400	disease resistance protein (TIR-NBS-LRR class), putative	F:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVA	O.I.	C.G.	H.G.
21.1	99.6	42.6	At1g76110	843943	high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein	F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MOFP	O.I.	C.G.	H.G.
20.9	99.6	13.1	At1g11300	837672	ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding	F:in 7 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
20.6	99.6	14.2	At5g60880	836209	unknown protein	F:unknown;P:unknown;C:cellular_component unknown;OPMF	O.I.	C.G.	H.G.
20.1	99.6	34.2	At4g30720	829195	electron carrier/ oxidoreductase	F:electron carrier activity, oxidoreductase activity;P:unknown;C:chloroplast;BOAPF	O.I.	C.G.	H.G.
19.7	99.6	58.9	At5g24760	832545	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV	O.I.	C.G.	H.G.
19.3	99.6	42.7	At4g33000	829437	CBL10 (CALCINEURIN B-LIKE 10)	Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.	O.I.	C.G.	H.G.
19.1	99.6	193.6	At2g04400	814980	indole-3-glycerol phosphate synthase (IGPS)	F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP	O.I.	C.G.	H.G.
19.1	99.6	174.4	At5g05730	830457	ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)	ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.	O.I.	C.G.	H.G.
19.1	99.6	157.2	At1g12800	837836	S1 RNA-binding domain-containing protein	F:RNA binding;P:unknown;C:chloroplast;BOMFPAV	O.I.	C.G.	H.G.
18.9	99.5	43.4	At5g64050	836526	ERS (GLUTAMATE TRNA SYNTHETASE)	Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.	O.I.	C.G.	H.G.
18.8	99.5	14.7	At2g45870	819195	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;BFPO	O.I.	C.G.	H.G.
18.5	99.5	52.8	At5g16715	831533	EMB2247 (embryo defective 2247)	F:valine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding;P:embryonic development ending in seed dormancy, tRNA aminoacylation for protein translation;C:chloroplast stroma, chloroplast;OBMAFP	O.I.	C.G.	H.G.
18.4	99.5	19.7	At5g46880	834733	HB-7 (HOMEOBOX-7)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MPFOB	O.I.	C.G.	H.G.
17.8	99.5	47.3	At3g49260	824087	iqd21 (IQ-domain 21)	F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PMOFB	O.I.	C.G.	H.G.
17.5	99.5	195.0	At3g54640	824629	TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)	Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).	O.I.	C.G.	H.G.
16.9	99.5	24.7	At3g63510	825526	FAD binding / catalytic/ tRNA dihydrouridine synthase	F:tRNA dihydrouridine synthase activity, FAD binding, catalytic activity;P:regulation of nitrogen utilization, tRNA processing, oxidation reduction, metabolic process;C:unknown;BOMFPA	O.I.	C.G.	H.G.
16.0	99.5	45.0	At1g14030	837964	ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-methyltransferase, putative	F:[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity;P:unknown;C:chloroplast, chloroplast stroma;MPFO	O.I.	C.G.	H.G.
16.0	99.5	23.3	At5g38140	833794	NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)	F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus, intracellular;MPFO	O.I.	C.G.	H.G.
15.9	99.5	84.9	At1g18590	838440	SOT17 (SULFOTRANSFERASE 17)	encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.	O.I.	C.G.	H.G.
15.3	99.4	22.6	At3g50240	824186	KICP-02	Encodes a kinesin-related protein.	O.I.	C.G.	H.G.
15.2	99.4	60.0	At3g01550	821114	PPT2 (PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2)	F:antiporter activity, triose-phosphate transmembrane transporter activity;P:triose phosphate transport, transport;C:integral to membrane, chloroplast, membrane;PMFOBA	O.I.	C.G.	H.G.
15.2	99.4	49.2	At4g26555	828762	immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein	F:FK506 binding, peptidyl-prolyl cis-trans isomerase activity;P:protein folding;C:chloroplast;BOPMFA	O.I.	C.G.	H.G.
15.0	99.4	42.1	At1g64150	842719	unknown protein	F:unknown;P:unknown;C:chloroplast, membrane;BOMFPA	O.I.	C.G.	H.G.
14.9	99.4	160.9	At1g08520	837374	CHLD	F:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVA	O.I.	C.G.	H.G.
14.8	99.4	52.7	At1g71720	843502	S1 RNA-binding domain-containing protein	F:RNA binding;P:unknown;C:chloroplast;BOPMAF	O.I.	C.G.	H.G.
14.7	99.4	24.3	At5g15310	831383	ATMYB16 (MYB DOMAIN PROTEIN 16)	Member of the R2R3 factor gene family.	O.I.	C.G.	H.G.
14.6	99.4	102.2	At1g01790	837332	KEA1 (K EFFLUX ANTIPORTER 1)	K efflux antiporter KEA1	O.I.	C.G.	H.G.
14.5	99.4	116.8	At3g14930	820722	HEME1	F:uroporphyrinogen decarboxylase activity;P:porphyrin biosynthetic process;C:chloroplast stroma, chloroplast;OBMFAP	O.I.	C.G.	H.G.
14.4	99.4	222.0	At5g48490	834905	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
14.4	99.4	63.5	At1g15290	838097	binding	F:binding;P:biological_process unknown;C:cellular_component unknown;MBOFPAV	O.I.	C.G.	H.G.
14.3	99.4	11.6	At4g13410	826972	ATCSLA15	encodes a gene similar to cellulose synthase	O.I.	C.G.	H.G.
14.2	99.4	38.1	At5g27730	832835	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OBMP	O.I.	C.G.	H.G.
14.1	99.4	34.9	At3g13180	820508	NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein	F:RNA binding;P:regulation of transcription, DNA-dependent;C:chloroplast;BOMFAP	O.I.	C.G.	H.G.
14.1	99.4	20.4	At2g21370	816675	xylulose kinase, putative	F:xylulokinase activity, phosphotransferase activity, alcohol group as acceptor;P:carbohydrate metabolic process, xylulose catabolic process;C:chloroplast, cytoplasm;BOPFAM	O.I.	C.G.	H.G.
13.6	99.4	39.0	At1g54820	841921	protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;MPOBFVA	O.I.	C.G.	H.G.
13.4	99.4	70.8	At3g59780	825147	-	F:molecular_function unknown;P:biological_process unknown;C:nucleus, chloroplast;OBMFPV	O.I.	C.G.	H.G.
13.1	99.4	22.1	At2g32640	817824	unknown protein	F:unknown;P:unknown;C:chloroplast;BPO	O.I.	C.G.	H.G.
13.0	99.4	36.6	At3g49140	824075	-	F:unknown;P:unknown;C:unknown;PBMOFVA	O.I.	C.G.	H.G.
12.8	99.3	97.1	At5g44720	834501	molybdenum cofactor sulfurase family protein	F:molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMFOPA	O.I.	C.G.	H.G.
12.8	99.3	76.2	At4g39970	830158	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAV	O.I.	C.G.	H.G.
12.7	99.3	36.3	At2g30695	817620	-	F:molecular_function unknown;P:protein folding, protein transport;C:chloroplast stroma, chloroplast;BOP	O.I.	C.G.	H.G.
12.6	99.3	89.9	At1g16080	838178	unknown protein	F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB	O.I.	C.G.	H.G.
12.5	99.3	138.7	At2g29650	817515	PHT4	Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.	O.I.	C.G.	H.G.
12.5	99.3	96.6	At3g54500	824615	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFB	O.I.	C.G.	H.G.
12.5	99.3	25.4	At2g45270	819135	glycoprotease M22 family protein	F:endopeptidase activity, metalloendopeptidase activity, zinc ion binding;P:proteolysis;C:unknown;OBMFAP	O.I.	C.G.	H.G.
12.3	99.3	138.1	At4g39950	830154	CYP79B2	Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
12.1	99.3	24.8	At2g26550	817196	HO2 (HEME OXYGENASE 2)	encodes a heme oxygenase that catalyzes the oxidation of heme to biliverdin IXalpha, CO and Fe(2+), a committed step in the biosynthesis of the phytochrome chromophore phytochromobilin.	O.I.	C.G.	H.G.
12.0	99.3	35.9	At3g03710	821181	RIF10 (resistant to inhibition with FSM 10)	Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.	O.I.	C.G.	H.G.
11.8	99.3	181.5	At1g43310	840932	triose phosphate/phosphate translocator-related	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POM	O.I.	C.G.	H.G.
11.8	99.3	102.5	At4g18970	827632	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
11.7	99.3	40.4	At4g04850	825822	KEA3	member of Putative potassium transporter family	O.I.	C.G.	H.G.
11.7	99.3	28.9	At2g38780	818460	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM	O.I.	C.G.	H.G.
11.6	99.3	69.1	At5g63050	836425	EMB2759 (embryo defective 2759)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:unknown;P	O.I.	C.G.	H.G.
11.6	99.3	50.7	At2g25840	817126	OVA4 (ovule abortion 4)	F:nucleotide binding, aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, ATP binding;P:N-terminal protein myristoylation, ovule development, tRNA aminoacylation for protein translation;C:mitochondrion, chloroplast;OBMFAP	O.I.	C.G.	H.G.
11.6	99.3	25.7	At1g05230	839256	HDG2 (HOMEODOMAIN GLABROUS 2)	Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.	O.I.	C.G.	H.G.
11.3	99.3	135.0	At2g47940	819406	DEGP2	Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.	O.I.	C.G.	H.G.
11.3	99.3	79.3	At1g60550	842350	ECHID (ENOYL-COA HYDRATASE/ISOMERASE D)	F:naphthoate synthase activity, catalytic activity;P:vitamin K biosynthetic process, metabolic process, menaquinone biosynthetic process;C:peroxisome;BOMFPA	O.I.	C.G.	H.G.
11.3	99.3	17.1	At1g72640	843596	binding / catalytic	F:binding, catalytic activity;P:metabolic process;C:chloroplast thylakoid membrane, chloroplast;BPOMA	O.I.	C.G.	H.G.
11.2	99.2	103.3	At4g24750	828577	-	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOA	O.I.	C.G.	H.G.
11.2	99.2	47.5	At5g45040	834535	cytochrome c6 (ATC6)	F:electron carrier activity, iron ion binding, heme binding;P:unknown;C:unknown;BOP	O.I.	C.G.	H.G.
11.2	99.2	16.3	At2g07680	815414	ATMRP11	member of MRP subfamily	O.I.	C.G.	H.G.
11.1	99.2	73.3	At4g21750	828263	ATML1 (MERISTEM LAYER 1)	Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.	O.I.	C.G.	H.G.
11.1	99.2	72.1	At3g02600	821299	LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)	Encodes phosphatidic acid phosphatase. Expressed during germination.	O.I.	C.G.	H.G.
11.1	99.2	36.3	At1g70610	843398	ATTAP1	member of TAP subfamily	O.I.	C.G.	H.G.
10.9	99.2	29.7	At4g18820	827616	ATP binding / DNA binding / DNA-directed DNA polymerase/ nucleoside-triphosphatase/ nucleotide binding	F:nucleoside-triphosphatase activity, DNA-directed DNA polymerase activity, DNA binding, nucleotide binding, ATP binding;P:DNA replication;C:plasma membrane;BOMFAPV	O.I.	C.G.	H.G.
10.8	99.2	71.8	At5g22640	832327	emb1211 (embryo defective 1211)	F:molecular_function unknown;P:embryonic development ending in seed dormancy;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;OMFBPVA	O.I.	C.G.	H.G.
10.8	99.2	20.8	At2g22650	816796	FAD-dependent oxidoreductase family protein	F:oxidoreductase activity;P:unknown;C:unknown;BOPFA	O.I.	C.G.	H.G.
10.4	99.2	37.1	At2g26540	817195	HEMD	F:uroporphyrinogen-III synthase activity;P:tetrapyrrole biosynthetic process, porphyrin biosynthetic process;C:chloroplast;BOPAF	O.I.	C.G.	H.G.
10.4	99.2	20.2	At1g69523	843286	UbiE/COQ5 methyltransferase family protein	F:methyltransferase activity;P:metabolic process;C:chloroplast;BOFAMP	O.I.	C.G.	H.G.
10.4	99.2	15.7	At5g24000	832465	unknown protein	F:unknown;P:unknown;C:chloroplast;BOPA	O.I.	C.G.	H.G.
10.4	99.2	12.9	At2g39250	818510	SNZ (SCHNARCHZAPFEN)	Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.	O.I.	C.G.	H.G.
10.3	99.2	36.9	At4g24090	828509	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BPFOMA	O.I.	C.G.	H.G.
10.3	99.2	30.9	At1g10910	837634	-	F:unknown;P:biological_process unknown;C:unknown;POMFBA	O.I.	C.G.	H.G.
10.3	99.2	27.0	At3g13490	820551	OVA5 (OVULE ABORTION 5)	Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.	O.I.	C.G.	H.G.
10.2	99.2	31.7	At1g19715	838560	jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOB	O.I.	C.G.	H.G.
10.1	99.2	98.8	At1g24807	839085	anthranilate synthase beta subunit, putative	F:catalytic activity, anthranilate synthase activity;P:glutamine metabolic process, biosynthetic process, metabolic process;C:chloroplast;BOFAMP	O.I.	C.G.	H.G.
10.1	99.2	52.6	At1g62250	842522	unknown protein	F:unknown;P:unknown;C:chloroplast;P	O.I.	C.G.	H.G.
10.1	99.2	11.2	At5g53210	835402	SPCH (SPEECHLESS)	Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6.	O.I.	C.G.	H.G.
10.0	99.2	130.7	At2g39470	818532	PPL2 (PsbP-like protein 2)	F:calcium ion binding;P:photosynthesis;C:in 6 components;PBO	O.I.	C.G.	H.G.
10.0	99.2	80.4	At3g26744	822287	ICE1 (INDUCER OF CBF EXPRESSION 1)	Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. Mutants are defective in cold-regulated gene expression. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance.	O.I.	C.G.	H.G.

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GSM ID	GSM183516
Assay name	MYB51_OE_rep1
GSE experiment	GSE7570: ATR1_like_Clade_OE_and_miR

Microarray experiments to specifically-expressed genes

GSM ID GSM183516 Assay name MYB51_OE_rep1 GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR

GSM ID GSM183516

Assay name MYB51_OE_rep1

GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR