CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM183515

Assay name ATR1_OE_rep1

GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
359.0 100.0 73.5 At1g12030 837755 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
257.1 100.0 222.1 At5g60890 836210 MYB34 (MYB DOMAIN PROTEIN 34) Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis. O.I. C.G. H.G.
199.2 100.0 234.3 At5g26220 832691 ChaC-like family protein F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP O.I. C.G. H.G.
93.0 99.9 182.3 At4g14680 827118 APS3 ATP sulfurylase O.I. C.G. H.G.
67.2 99.8 192.1 At2g22330 816765 CYP79B3 Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
47.0 99.8 283.2 At4g39940 830153 AKN2 (APS-kinase 2) adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete O.I. C.G. H.G.
46.6 99.8 91.3 At5g01500 831861 mitochondrial substrate carrier family protein encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover O.I. C.G. H.G.
42.7 99.8 141.5 At5g48850 834943 ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1) homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools. O.I. C.G. H.G.
38.8 99.8 119.8 At1g36370 840543 SHM7 (serine hydroxymethyltransferase 7) Encodes a putative serine hydroxymethyltransferase. O.I. C.G. H.G.
37.5 99.7 254.8 At5g17990 831666 TRP1 (tryptophan biosynthesis 1) Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. O.I. C.G. H.G.
31.8 99.7 160.2 At3g23570 821936 dienelactone hydrolase family protein F:hydrolase activity;P:response to salt stress;C:cellular_component unknown;BFPOMA O.I. C.G. H.G.
31.0 99.7 73.8 At5g24760 832545 alcohol dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV O.I. C.G. H.G.
26.2 99.7 7.5 At2g42380 818839 bZIP transcription factor family protein Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells. O.I. C.G. H.G.
23.5 99.6 183.6 At5g63980 836519 SAL1 Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. O.I. C.G. H.G.
22.5 99.6 210.0 At2g04400 814980 indole-3-glycerol phosphate synthase (IGPS) F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP O.I. C.G. H.G.
19.6 99.6 24.5 At1g80080 844348 TMM (TOO MANY MOUTHS) Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. O.I. C.G. H.G.
19.2 99.6 53.8 At3g49580 824120 LSU1 (RESPONSE TO LOW SULFUR 1) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
17.1 99.5 165.1 At5g05730 830457 ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1) ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots. O.I. C.G. H.G.
16.7 99.5 99.4 At2g01420 814670 PIN4 (PIN-FORMED 4) Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452). O.I. C.G. H.G.
16.2 99.5 158.2 At4g39950 830154 CYP79B2 Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates. O.I. C.G. H.G.
16.0 99.5 60.6 At5g47870 834838 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO O.I. C.G. H.G.
15.8 99.5 232.6 At5g48490 834905 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:lipid transport;C:endomembrane system;P O.I. C.G. H.G.
15.8 99.5 66.7 At2g44460 819053 BGLU28 (BETA GLUCOSIDASE 28) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA O.I. C.G. H.G.
15.8 99.5 25.2 At5g55570 835651 unknown protein F:unknown;P:unknown;C:chloroplast;PM O.I. C.G. H.G.
15.7 99.5 146.1 At2g40610 818656 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
15.7 99.5 92.6 At1g70940 843432 PIN3 (PIN-FORMED 3) A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane. O.I. C.G. H.G.
15.7 99.5 32.5 At3g05400 819704 sugar transporter, putative F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA O.I. C.G. H.G.
15.7 99.5 25.3 At3g12520 820431 SULTR4 Encodes a sulfate transporter that in induced under sulfate limitation. O.I. C.G. H.G.
15.3 99.4 27.0 At5g57590 835863 BIO1 (biotin auxotroph 1) Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. O.I. C.G. H.G.
15.1 99.4 21.2 At5g18290 831947 SIP1 Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER O.I. C.G. H.G.
15.0 99.4 89.7 At1g12250 837778 thylakoid lumenal protein-related F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOAPV O.I. C.G. H.G.
15.0 99.4 50.1 At3g58010 824970 unknown protein F:unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule;PFO O.I. C.G. H.G.
14.8 99.4 51.8 At4g32770 829413 VTE1 (VITAMIN E DEFICIENT 1) Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading. O.I. C.G. H.G.
14.8 99.4 21.1 At2g29300 817479 tropinone reductase, putative / tropine dehydrogenase, putative F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV O.I. C.G. H.G.
14.5 99.4 52.8 At4g03400 827938 DFL2 (DWARF IN LIGHT 2) Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation. O.I. C.G. H.G.
14.4 99.4 101.3 At1g01790 837332 KEA1 (K EFFLUX ANTIPORTER 1) K efflux antiporter KEA1 O.I. C.G. H.G.
14.1 99.4 271.5 At4g27070 828815 TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2) Tryptophan synthase beta. Expressed at low levels in all tissues. O.I. C.G. H.G.
14.0 99.4 36.3 At4g33000 829437 CBL10 (CALCINEURIN B-LIKE 10) Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. O.I. C.G. H.G.
13.8 99.4 31.4 At2g38780 818460 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM O.I. C.G. H.G.
13.5 99.4 16.6 At1g77990 844134 AST56 cDNA encoding a sulfate transporter. O.I. C.G. H.G.
13.4 99.4 40.0 At1g70610 843398 ATTAP1 member of TAP subfamily O.I. C.G. H.G.
13.2 99.4 60.2 At1g62250 842522 unknown protein F:unknown;P:unknown;C:chloroplast;P O.I. C.G. H.G.
13.1 99.4 135.9 At2g14750 815963 APK (APS KINASE) Encodes a functional APS kinase O.I. C.G. H.G.
12.9 99.3 97.6 At5g44720 834501 molybdenum cofactor sulfurase family protein F:molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMFOPA O.I. C.G. H.G.
12.8 99.3 127.6 At5g24420 832513 glucosamine/galactosamine-6-phosphate isomerase-related F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP O.I. C.G. H.G.
12.6 99.3 38.5 At1g64150 842719 unknown protein F:unknown;P:unknown;C:chloroplast, membrane;BOMFPA O.I. C.G. H.G.
12.4 99.3 118.8 At2g46650 819277 CB5-C (CYTOCHROME B5 ISOFORM C) member of Cytochromes b5 O.I. C.G. H.G.
12.4 99.3 32.7 At1g76110 843943 high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MOFP O.I. C.G. H.G.
12.3 99.3 119.0 At4g37760 829932 SQE3 (squalene epoxidase 3) F:squalene monooxygenase activity;P:response to jasmonic acid stimulus, sterol biosynthetic process, response to wounding;C:endomembrane system, integral to membrane;BOFMPA O.I. C.G. H.G.
12.2 99.3 78.0 At3g47295 823883 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
11.8 99.3 48.9 At5g45040 834535 cytochrome c6 (ATC6) F:electron carrier activity, iron ion binding, heme binding;P:unknown;C:unknown;BOP O.I. C.G. H.G.
11.6 99.3 184.3 At5g65730 836702 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative F:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:response to water deprivation;C:endomembrane system, cell wall, apoplast;PFBO O.I. C.G. H.G.
11.5 99.3 17.0 At3g06100 819783 NIP7 F:water channel activity;P:transport;C:membrane;BPMOFAV O.I. C.G. H.G.
11.4 99.3 75.8 At3g59760 825145 OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C) Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC O.I. C.G. H.G.
11.3 99.3 50.0 At1g12860 837843 SCRM2 (SCREAM 2) Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation. O.I. C.G. H.G.
11.2 99.2 84.6 At1g16080 838178 unknown protein F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB O.I. C.G. H.G.
11.0 99.2 51.0 At3g01550 821114 PPT2 (PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2) F:antiporter activity, triose-phosphate transmembrane transporter activity;P:triose phosphate transport, transport;C:integral to membrane, chloroplast, membrane;PMFOBA O.I. C.G. H.G.
10.9 99.2 22.6 At1g69160 843247 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMV O.I. C.G. H.G.
10.7 99.2 103.8 At4g25700 828675 BETA-OHASE 1 (BETA-HYDROXYLASE 1) Converts beta-carotene to zeaxanthin via cryptoxanthin. O.I. C.G. H.G.
10.6 99.2 326.1 At3g22890 821861 APS1 (ATP SULFURYLASE 1) encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. O.I. C.G. H.G.
10.5 99.2 180.4 At5g48180 834871 NSP5 (NITRILE SPECIFIER PROTEIN 5) Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation. O.I. C.G. H.G.
10.4 99.2 10.9 At2g45870 819195 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;BFPO O.I. C.G. H.G.
10.2 99.2 197.4 At1g75280 843865 isoflavone reductase, putative isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress. O.I. C.G. H.G.
10.2 99.2 174.1 At4g35250 829678 vestitone reductase-related F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast;BOPFMA O.I. C.G. H.G.
9.9 99.1 113.5 At4g08870 826458 arginase, putative Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. O.I. C.G. H.G.
9.9 99.1 6.0 At2g37030 818278 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO O.I. C.G. H.G.
9.8 99.1 107.2 At1g32220 840114 binding / catalytic/ coenzyme binding F:coenzyme binding, binding, catalytic activity;P:response to oxidative stress;C:thylakoid, chloroplast, plastoglobule;BOFPMA O.I. C.G. H.G.
9.8 99.1 77.3 At5g02760 831234 protein phosphatase 2C family protein / PP2C family protein F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAV O.I. C.G. H.G.
9.8 99.1 76.6 At2g40300 818622 ATFER4 (ferritin 4) Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. O.I. C.G. H.G.
9.7 99.1 105.6 At2g20610 816585 SUR1 (SUPERROOT 1) Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis. O.I. C.G. H.G.
9.7 99.1 82.8 At3g28270 822453 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFV O.I. C.G. H.G.
9.7 99.1 71.6 At1g12520 837808 ATCCS (COPPER CHAPERONE FOR SOD1) Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta. O.I. C.G. H.G.
9.6 99.1 132.5 At1g48850 841307 EMB1144 (embryo defective 1144) F:chorismate synthase activity;P:embryonic development ending in seed dormancy, aromatic amino acid family biosynthetic process;C:nucleolus, chloroplast;OBAFPM O.I. C.G. H.G.
9.6 99.1 45.6 At5g52570 835334 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) Converts β-carotene to zeaxanthin via cryptoxanthin. O.I. C.G. H.G.
9.5 99.1 65.5 At4g39970 830158 haloacid dehalogenase-like hydrolase family protein F:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAV O.I. C.G. H.G.
9.4 99.1 217.1 At5g67030 836838 ABA1 (ABA DEFICIENT 1) Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. O.I. C.G. H.G.
9.4 99.1 59.7 At1g52510 841682 hydrolase, alpha/beta fold family protein F:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFA O.I. C.G. H.G.
9.3 99.1 51.5 At4g12980 826910 auxin-responsive protein, putative F:unknown;P:multicellular organismal development;C:membrane;PMFOB O.I. C.G. H.G.
9.3 99.1 40.9 At1g62800 842579 ASP4 (ASPARTATE AMINOTRANSFERASE 4) Encodes aspartate aminotransferase (Asp4). O.I. C.G. H.G.
9.2 99.1 29.3 At4g18810 827615 binding / catalytic/ transcription repressor F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast, vacuole;BOPFAM O.I. C.G. H.G.
9.1 99.1 37.0 At1g75100 843847 JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1) Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known. O.I. C.G. H.G.
9.0 99.1 124.0 At2g39470 818532 PPL2 (PsbP-like protein 2) F:calcium ion binding;P:photosynthesis;C:in 6 components;PBO O.I. C.G. H.G.
8.9 99.0 36.8 At1g10700 837613 ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3) F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;BOMFAPV O.I. C.G. H.G.
8.9 99.0 17.7 At4g38950 830050 kinesin motor family protein F:microtubule motor activity, ATP binding;P:microtubule-based process, microtubule-based movement;C:microtubule associated complex;MOPF O.I. C.G. H.G.
8.8 99.0 300.2 At4g31500 829277 CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1) Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction. O.I. C.G. H.G.
8.8 99.0 36.5 At1g77060 844041 mutase family protein F:catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma;OBFPAM O.I. C.G. H.G.
8.7 99.0 228.0 At2g24270 816962 ALDH11A3 Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity. O.I. C.G. H.G.
8.7 99.0 31.7 At4g14560 827103 IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE) auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein. O.I. C.G. H.G.
8.7 99.0 17.0 At3g50240 824186 KICP-02 Encodes a kinesin-related protein. O.I. C.G. H.G.
8.6 99.0 115.0 At2g29650 817515 PHT4 Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane. O.I. C.G. H.G.
8.6 99.0 44.1 At4g37310 829886 CYP81H1 member of CYP81H O.I. C.G. H.G.
8.6 99.0 18.0 At2g32640 817824 unknown protein F:unknown;P:unknown;C:chloroplast;BPO O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
359.0	100.0	73.5	At1g12030	837755	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
257.1	100.0	222.1	At5g60890	836210	MYB34 (MYB DOMAIN PROTEIN 34)	Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.	O.I.	C.G.	H.G.
199.2	100.0	234.3	At5g26220	832691	ChaC-like family protein	F:molecular_function unknown;P:response to lead ion, response to cadmium ion;C:cellular_component unknown;BMOFP	O.I.	C.G.	H.G.
93.0	99.9	182.3	At4g14680	827118	APS3	ATP sulfurylase	O.I.	C.G.	H.G.
67.2	99.8	192.1	At2g22330	816765	CYP79B3	Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
47.0	99.8	283.2	At4g39940	830153	AKN2 (APS-kinase 2)	adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete	O.I.	C.G.	H.G.
46.6	99.8	91.3	At5g01500	831861	mitochondrial substrate carrier family protein	encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover	O.I.	C.G.	H.G.
42.7	99.8	141.5	At5g48850	834943	ATSDI1 (SULPHUR DEFICIENCY-INDUCED 1)	homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.	O.I.	C.G.	H.G.
38.8	99.8	119.8	At1g36370	840543	SHM7 (serine hydroxymethyltransferase 7)	Encodes a putative serine hydroxymethyltransferase.	O.I.	C.G.	H.G.
37.5	99.7	254.8	At5g17990	831666	TRP1 (tryptophan biosynthesis 1)	Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate.	O.I.	C.G.	H.G.
31.8	99.7	160.2	At3g23570	821936	dienelactone hydrolase family protein	F:hydrolase activity;P:response to salt stress;C:cellular_component unknown;BFPOMA	O.I.	C.G.	H.G.
31.0	99.7	73.8	At5g24760	832545	alcohol dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:oxidation reduction, metabolic process;C:chloroplast;BOPFMAV	O.I.	C.G.	H.G.
26.2	99.7	7.5	At2g42380	818839	bZIP transcription factor family protein	Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.	O.I.	C.G.	H.G.
23.5	99.6	183.6	At5g63980	836519	SAL1	Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.	O.I.	C.G.	H.G.
22.5	99.6	210.0	At2g04400	814980	indole-3-glycerol phosphate synthase (IGPS)	F:indole-3-glycerol-phosphate synthase activity;P:tryptophan biosynthetic process;C:chloroplast;BOAFP	O.I.	C.G.	H.G.
19.6	99.6	24.5	At1g80080	844348	TMM (TOO MANY MOUTHS)	Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.	O.I.	C.G.	H.G.
19.2	99.6	53.8	At3g49580	824120	LSU1 (RESPONSE TO LOW SULFUR 1)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
17.1	99.5	165.1	At5g05730	830457	ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1)	ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.	O.I.	C.G.	H.G.
16.7	99.5	99.4	At2g01420	814670	PIN4 (PIN-FORMED 4)	Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452).	O.I.	C.G.	H.G.
16.2	99.5	158.2	At4g39950	830154	CYP79B2	Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.	O.I.	C.G.	H.G.
16.0	99.5	60.6	At5g47870	834838	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
15.8	99.5	232.6	At5g48490	834905	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
15.8	99.5	66.7	At2g44460	819053	BGLU28 (BETA GLUCOSIDASE 28)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:membrane;BOPMFA	O.I.	C.G.	H.G.
15.8	99.5	25.2	At5g55570	835651	unknown protein	F:unknown;P:unknown;C:chloroplast;PM	O.I.	C.G.	H.G.
15.7	99.5	146.1	At2g40610	818656	ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8)	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
15.7	99.5	92.6	At1g70940	843432	PIN3 (PIN-FORMED 3)	A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in PIN3 trafficking to the plasma membrane.	O.I.	C.G.	H.G.
15.7	99.5	32.5	At3g05400	819704	sugar transporter, putative	F:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:integral to membrane, membrane;BMFPOA	O.I.	C.G.	H.G.
15.7	99.5	25.3	At3g12520	820431	SULTR4	Encodes a sulfate transporter that in induced under sulfate limitation.	O.I.	C.G.	H.G.
15.3	99.4	27.0	At5g57590	835863	BIO1 (biotin auxotroph 1)	Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase.	O.I.	C.G.	H.G.
15.1	99.4	21.2	At5g18290	831947	SIP1	Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER	O.I.	C.G.	H.G.
15.0	99.4	89.7	At1g12250	837778	thylakoid lumenal protein-related	F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOAPV	O.I.	C.G.	H.G.
15.0	99.4	50.1	At3g58010	824970	unknown protein	F:unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule;PFO	O.I.	C.G.	H.G.
14.8	99.4	51.8	At4g32770	829413	VTE1 (VITAMIN E DEFICIENT 1)	Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.	O.I.	C.G.	H.G.
14.8	99.4	21.1	At2g29300	817479	tropinone reductase, putative / tropine dehydrogenase, putative	F:oxidoreductase activity, binding, catalytic activity;P:metabolic process;C:endomembrane system;BOMFPAV	O.I.	C.G.	H.G.
14.5	99.4	52.8	At4g03400	827938	DFL2 (DWARF IN LIGHT 2)	Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.	O.I.	C.G.	H.G.
14.4	99.4	101.3	At1g01790	837332	KEA1 (K EFFLUX ANTIPORTER 1)	K efflux antiporter KEA1	O.I.	C.G.	H.G.
14.1	99.4	271.5	At4g27070	828815	TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)	Tryptophan synthase beta. Expressed at low levels in all tissues.	O.I.	C.G.	H.G.
14.0	99.4	36.3	At4g33000	829437	CBL10 (CALCINEURIN B-LIKE 10)	Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.	O.I.	C.G.	H.G.
13.8	99.4	31.4	At2g38780	818460	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POBM	O.I.	C.G.	H.G.
13.5	99.4	16.6	At1g77990	844134	AST56	cDNA encoding a sulfate transporter.	O.I.	C.G.	H.G.
13.4	99.4	40.0	At1g70610	843398	ATTAP1	member of TAP subfamily	O.I.	C.G.	H.G.
13.2	99.4	60.2	At1g62250	842522	unknown protein	F:unknown;P:unknown;C:chloroplast;P	O.I.	C.G.	H.G.
13.1	99.4	135.9	At2g14750	815963	APK (APS KINASE)	Encodes a functional APS kinase	O.I.	C.G.	H.G.
12.9	99.3	97.6	At5g44720	834501	molybdenum cofactor sulfurase family protein	F:molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity;P:biological_process unknown;C:cellular_component unknown;BMFOPA	O.I.	C.G.	H.G.
12.8	99.3	127.6	At5g24420	832513	glucosamine/galactosamine-6-phosphate isomerase-related	F:6-phosphogluconolactonase activity;P:pentose-phosphate shunt, pentose-phosphate shunt, oxidative branch, carbohydrate metabolic process;C:cellular_component unknown;BOMFP	O.I.	C.G.	H.G.
12.6	99.3	38.5	At1g64150	842719	unknown protein	F:unknown;P:unknown;C:chloroplast, membrane;BOMFPA	O.I.	C.G.	H.G.
12.4	99.3	118.8	At2g46650	819277	CB5-C (CYTOCHROME B5 ISOFORM C)	member of Cytochromes b5	O.I.	C.G.	H.G.
12.4	99.3	32.7	At1g76110	843943	high mobility group (HMG1/2) family protein / ARID/BRIGHT DNA-binding domain-containing protein	F:transcription factor activity;P:regulation of transcription;C:intracellular, nucleus;MOFP	O.I.	C.G.	H.G.
12.3	99.3	119.0	At4g37760	829932	SQE3 (squalene epoxidase 3)	F:squalene monooxygenase activity;P:response to jasmonic acid stimulus, sterol biosynthetic process, response to wounding;C:endomembrane system, integral to membrane;BOFMPA	O.I.	C.G.	H.G.
12.2	99.3	78.0	At3g47295	823883	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
11.8	99.3	48.9	At5g45040	834535	cytochrome c6 (ATC6)	F:electron carrier activity, iron ion binding, heme binding;P:unknown;C:unknown;BOP	O.I.	C.G.	H.G.
11.6	99.3	184.3	At5g65730	836702	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	F:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:response to water deprivation;C:endomembrane system, cell wall, apoplast;PFBO	O.I.	C.G.	H.G.
11.5	99.3	17.0	At3g06100	819783	NIP7	F:water channel activity;P:transport;C:membrane;BPMOFAV	O.I.	C.G.	H.G.
11.4	99.3	75.8	At3g59760	825145	OASC (O-ACETYLSERINE (THIOL) LYASE ISOFORM C)	Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC	O.I.	C.G.	H.G.
11.3	99.3	50.0	At1g12860	837843	SCRM2 (SCREAM 2)	Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.	O.I.	C.G.	H.G.
11.2	99.2	84.6	At1g16080	838178	unknown protein	F:unknown;P:unknown;C:apoplast, chloroplast stroma, chloroplast, chloroplast envelope;POB	O.I.	C.G.	H.G.
11.0	99.2	51.0	At3g01550	821114	PPT2 (PHOSPHOENOLPYRUVATE (PEP)/PHOSPHATE TRANSLOCATOR 2)	F:antiporter activity, triose-phosphate transmembrane transporter activity;P:triose phosphate transport, transport;C:integral to membrane, chloroplast, membrane;PMFOBA	O.I.	C.G.	H.G.
10.9	99.2	22.6	At1g69160	843247	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFMV	O.I.	C.G.	H.G.
10.7	99.2	103.8	At4g25700	828675	BETA-OHASE 1 (BETA-HYDROXYLASE 1)	Converts beta-carotene to zeaxanthin via cryptoxanthin.	O.I.	C.G.	H.G.
10.6	99.2	326.1	At3g22890	821861	APS1 (ATP SULFURYLASE 1)	encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis.	O.I.	C.G.	H.G.
10.5	99.2	180.4	At5g48180	834871	NSP5 (NITRILE SPECIFIER PROTEIN 5)	Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.	O.I.	C.G.	H.G.
10.4	99.2	10.9	At2g45870	819195	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;BFPO	O.I.	C.G.	H.G.
10.2	99.2	197.4	At1g75280	843865	isoflavone reductase, putative	isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.	O.I.	C.G.	H.G.
10.2	99.2	174.1	At4g35250	829678	vestitone reductase-related	F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast;BOPFMA	O.I.	C.G.	H.G.
9.9	99.1	113.5	At4g08870	826458	arginase, putative	Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment.	O.I.	C.G.	H.G.
9.9	99.1	6.0	At2g37030	818278	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
9.8	99.1	107.2	At1g32220	840114	binding / catalytic/ coenzyme binding	F:coenzyme binding, binding, catalytic activity;P:response to oxidative stress;C:thylakoid, chloroplast, plastoglobule;BOFPMA	O.I.	C.G.	H.G.
9.8	99.1	77.3	At5g02760	831234	protein phosphatase 2C family protein / PP2C family protein	F:protein serine/threonine phosphatase activity, catalytic activity;P:protein amino acid dephosphorylation;C:protein serine/threonine phosphatase complex;PMOFBAV	O.I.	C.G.	H.G.
9.8	99.1	76.6	At2g40300	818622	ATFER4 (ferritin 4)	Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.	O.I.	C.G.	H.G.
9.7	99.1	105.6	At2g20610	816585	SUR1 (SUPERROOT 1)	Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis.	O.I.	C.G.	H.G.
9.7	99.1	82.8	At3g28270	822453	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BMPOAFV	O.I.	C.G.	H.G.
9.7	99.1	71.6	At1g12520	837808	ATCCS (COPPER CHAPERONE FOR SOD1)	Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.	O.I.	C.G.	H.G.
9.6	99.1	132.5	At1g48850	841307	EMB1144 (embryo defective 1144)	F:chorismate synthase activity;P:embryonic development ending in seed dormancy, aromatic amino acid family biosynthetic process;C:nucleolus, chloroplast;OBAFPM	O.I.	C.G.	H.G.
9.6	99.1	45.6	At5g52570	835334	BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2)	Converts β-carotene to zeaxanthin via cryptoxanthin.	O.I.	C.G.	H.G.
9.5	99.1	65.5	At4g39970	830158	haloacid dehalogenase-like hydrolase family protein	F:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAV	O.I.	C.G.	H.G.
9.4	99.1	217.1	At5g67030	836838	ABA1 (ABA DEFICIENT 1)	Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.	O.I.	C.G.	H.G.
9.4	99.1	59.7	At1g52510	841682	hydrolase, alpha/beta fold family protein	F:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFA	O.I.	C.G.	H.G.
9.3	99.1	51.5	At4g12980	826910	auxin-responsive protein, putative	F:unknown;P:multicellular organismal development;C:membrane;PMFOB	O.I.	C.G.	H.G.
9.3	99.1	40.9	At1g62800	842579	ASP4 (ASPARTATE AMINOTRANSFERASE 4)	Encodes aspartate aminotransferase (Asp4).	O.I.	C.G.	H.G.
9.2	99.1	29.3	At4g18810	827615	binding / catalytic/ transcription repressor	F:transcription repressor activity, binding, catalytic activity;P:regulation of nitrogen utilization, metabolic process;C:chloroplast, vacuole;BOPFAM	O.I.	C.G.	H.G.
9.1	99.1	37.0	At1g75100	843847	JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1)	Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known.	O.I.	C.G.	H.G.
9.0	99.1	124.0	At2g39470	818532	PPL2 (PsbP-like protein 2)	F:calcium ion binding;P:photosynthesis;C:in 6 components;PBO	O.I.	C.G.	H.G.
8.9	99.0	36.8	At1g10700	837613	ribose-phosphate pyrophosphokinase 3 / phosphoribosyl diphosphate synthetase 3 (PRS3)	F:magnesium ion binding, ribose phosphate diphosphokinase activity;P:cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process;C:chloroplast;BOMFAPV	O.I.	C.G.	H.G.
8.9	99.0	17.7	At4g38950	830050	kinesin motor family protein	F:microtubule motor activity, ATP binding;P:microtubule-based process, microtubule-based movement;C:microtubule associated complex;MOPF	O.I.	C.G.	H.G.
8.8	99.0	300.2	At4g31500	829277	CYP83B1 (CYTOCHROME P450 MONOOXYGENASE 83B1)	Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.	O.I.	C.G.	H.G.
8.8	99.0	36.5	At1g77060	844041	mutase family protein	F:catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma;OBFPAM	O.I.	C.G.	H.G.
8.7	99.0	228.0	At2g24270	816962	ALDH11A3	Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.	O.I.	C.G.	H.G.
8.7	99.0	31.7	At4g14560	827103	IAA1 (INDOLE-3-ACETIC ACID INDUCIBLE)	auxin (indole-3-acetic acid) induced gene (IAA1) encoding a short-lived nuclear-localized transcriptional regulator protein.	O.I.	C.G.	H.G.
8.7	99.0	17.0	At3g50240	824186	KICP-02	Encodes a kinesin-related protein.	O.I.	C.G.	H.G.
8.6	99.0	115.0	At2g29650	817515	PHT4	Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.	O.I.	C.G.	H.G.
8.6	99.0	44.1	At4g37310	829886	CYP81H1	member of CYP81H	O.I.	C.G.	H.G.
8.6	99.0	18.0	At2g32640	817824	unknown protein	F:unknown;P:unknown;C:chloroplast;BPO	O.I.	C.G.	H.G.

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GSM ID	GSM183515
Assay name	ATR1_OE_rep1
GSE experiment	GSE7570: ATR1_like_Clade_OE_and_miR

Microarray experiments to specifically-expressed genes

GSM ID GSM183515 Assay name ATR1_OE_rep1 GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR

GSM ID GSM183515

Assay name ATR1_OE_rep1

GSE experiment GSE7570: ATR1_like_Clade_OE_and_miR