Microarray experiments to specifically-expressed genes

GSM ID GSM177119
Assay name ga-1 (SALK_109115) mock treated for 1 hr, replicate 1
GSE experiment GSE7353: Early GA response genes in Arabidopsis thaliana

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
29.099.741.8At3g44970823632cytochrome P450 family proteinF:electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding;P:unknown;C:endomembrane system;MPBFOAVO.I.C.G.H.G.
22.799.6182.3At4g2187082827626.5 kDa class P-related heat shock protein (HSP26.5-P)F:unknown;P:response to heat;C:cellular_component unknown;PBOFAO.I.C.G.H.G.
14.799.467.4At1g15550838125GA3OX1 (GIBBERELLIN 3-OXIDASE 1)Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (Δ-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).O.I.C.G.H.G.
12.199.323.9At2g23130816845AGP17 (ARABINOGALACTAN PROTEIN 17)AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.O.I.C.G.H.G. kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAO.I.C.G.H.G. lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:membrane;PFOO.I.C.G.H.G.
6.4185.8At3g44890823623RPL9 (RIBOSOMAL PROTEIN L9)Plastid ribosomal protein CL9O.I.C.G.H.G.
6.461.4At2g22230816756beta-hydroxyacyl-ACP dehydratase, putativeF:3-hydroxybutyryl-[acyl-carrier-protein] dehydratase activity, 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity;P:fatty acid biosynthetic process;C:cell wall, chloroplast;BOPMO.I.C.G.H.G.
3.7259.7At4g03520825653ATHM2chloroplast localized thioredoxin, similar to prokaryotic types.O.I.C.G.H.G.
3.7235.9At2g21170816652TIM (TRIOSEPHOSPHATE ISOMERASE)Encodes triosephosphate isomerase.O.I.C.G.H.G.

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