CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM176878

Assay name AWP_AL_Txed_2

GSE experiment GSE7334: Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
579.8 100.0 42.2 At1g33090 840205 MATE efflux family protein F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM O.I. C.G. H.G.
315.3 100.0 47.8 At2g43580 818960 chitinase, putative F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMV O.I. C.G. H.G.
271.5 100.0 112.6 At1g09180 837438 ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1) A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. O.I. C.G. H.G.
181.2 100.0 1885.7 At2g02930 814822 ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
168.7 100.0 32.1 At2g02380 814769 ATGSTZ2 Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). O.I. C.G. H.G.
168.3 100.0 23.3 At5g18880 832006 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
154.6 99.9 31.1 At2g16410 816139 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
151.1 99.9 90.0 At5g14670 831319 ATARFA1B (ADP-ribosylation factor A1B) A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. O.I. C.G. H.G.
141.7 99.9 43.0 At5g51290 835203 ceramide kinase-related F:diacylglycerol kinase activity;P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;C:cellular_component unknown;MOPBF O.I. C.G. H.G.
132.4 99.9 12.9 At2g17860 816296 pathogenesis-related thaumatin family protein F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV O.I. C.G. H.G.
131.4 99.9 8.9 At2g10465 815506 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
128.8 99.9 25.4 At2g04560 814998 transferase, transferring glycosyl groups F:transferase activity, transferring glycosyl groups;P:lipid A biosynthetic process;C:cellular_component unknown;OBP O.I. C.G. H.G.
125.3 99.9 19.0 At1g06310 837141 ACX6 (ACYL-COA OXIDASE 6) Encodes a putative acyl-CoA oxidase. However, no transcripts have been detected for this gene and no altered phenotypes have been detected in plants mutant for this gene. This suggests that ACX6 does not significantly contribute to seedling beta-oxidation of fatty acids or indole-3-butyric acid in vivo. O.I. C.G. H.G.
124.3 99.9 36.5 At2g23960 816929 defense-related protein, putative F:catalytic activity;P:defense response;C:cellular_component unknown;OBAFPM O.I. C.G. H.G.
119.1 99.9 9.1 At1g39350 840697 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
116.4 99.9 38.4 At3g14630 820691 CYP72A9 putative cytochrome P450 O.I. C.G. H.G.
116.4 99.9 33.7 At1g79960 844336 OFP14 (OVATE FAMILY PROTEIN 14) F:unknown;P:biological_process unknown;C:unknown;PFOM O.I. C.G. H.G.
112.3 99.9 12.3 At5g32610 833243 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
111.7 99.9 17.8 At5g46120 834654 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
108.4 99.9 14.5 At1g43940 840993 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
105.1 99.9 15.6 At3g62380 825411 - F:molecular_function unknown;P:biological_process unknown;C:unknown;PO O.I. C.G. H.G.
104.7 99.9 55.2 At2g15350 816027 FUT10 (FUCOSYLTRANSFERASE 10) member of Glycosyltransferase Family- 37 O.I. C.G. H.G.
104.2 99.9 14.5 At3g05440 819709 C2 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
103.6 99.9 10.5 At3g42980 823354 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
103.0 99.9 26.6 At1g76530 843986 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO O.I. C.G. H.G.
102.0 99.9 14.6 At1g50530 841475 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
101.4 99.9 33.0 At2g24840 817021 AGL61 (AGAMOUS-LIKE 61) Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell. O.I. C.G. H.G.
100.3 99.9 24.6 At3g29796 822693 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP O.I. C.G. H.G.
99.9 99.9 43.1 At2g16360 816132 40S ribosomal protein S25 (RPS25A) F:structural constituent of ribosome;P:translation;C:in 6 components;MFPO O.I. C.G. H.G.
97.7 99.9 30.2 At4g38880 830043 ATASE3 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 3) GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 O.I. C.G. H.G.
97.7 99.9 22.7 At3g57130 824880 BOP1 (BLADE ON PETIOLE 1) ankyrin repeat family protein / BTB/POZ domain-containing protein, contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain. Lines carrying recessive mutations exhibit a number of visible defects, most pronounced being ectopic outgrowths of in leaf petioles of rosette leaves.Along with bop2, bop1 is required for nectary development and formation of normal abscission zones. O.I. C.G. H.G.
95.7 99.9 19.1 At5g35300 833484 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
93.8 99.9 11.7 At3g26040 822201 transferase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF O.I. C.G. H.G.
92.8 99.9 23.8 At2g04060 814940 beta-galactosidase, putative / lactase, putative F:cation binding, beta-galactosidase activity, catalytic activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PMO O.I. C.G. H.G.
92.6 99.9 33.2 At5g50820 835154 anac097 (Arabidopsis NAC domain containing protein 97) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P O.I. C.G. H.G.
92.5 99.9 15.1 At2g17600 816267 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;POM O.I. C.G. H.G.
90.1 99.9 25.2 At5g55650 835659 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
90.1 99.9 24.3 At3g49150 824076 - F:molecular_function unknown;P:protein insertion into membrane;C:integral to membrane;PMF O.I. C.G. H.G.
89.8 99.9 21.4 At1g64560 842764 - pseudogene of S-adenosylmethionine-dependent methyltransferase/rRNA (adenine-N6,N6-)-dimethyltransferase/rRNA methyltransferase O.I. C.G. H.G.
89.4 99.9 19.1 At3g53790 824546 TRFL4 (TRF-LIKE 4) Arabidopsis thaliana telomere-binding protein, putative (At3g53790) O.I. C.G. H.G.
89.1 99.9 17.8 At2g12910 3768701 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
88.7 99.9 5.0 At4g07550 3770366 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
87.9 99.9 9.9 At1g32680 840162 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
87.3 99.9 31.5 At2g37910 818367 cation/hydrogen exchanger, putative (CHX21) F:monovalent cation:proton antiporter activity;P:cation transport;C:endomembrane system;P O.I. C.G. H.G.
86.9 99.9 25.3 At1g65350 842845 UBQ13 polyubiquitin gene,Columbia ecotype revealed that the gene contained a 3.9-kb insertion in the coding region from mitochondrial DNA. O.I. C.G. H.G.
86.6 99.9 18.4 At3g42550 823265 aspartic-type endopeptidase F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO O.I. C.G. H.G.
86.5 99.9 37.3 At3g45130 823649 LAS1 F:lanosterol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:cellular_component unknown;BPOFMA O.I. C.G. H.G.
85.6 99.9 28.5 At1g72860 843617 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA O.I. C.G. H.G.
83.2 99.9 34.5 At2g31050 817657 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POA O.I. C.G. H.G.
82.6 99.9 23.1 At3g59610 825130 F-box family protein / jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO O.I. C.G. H.G.
82.4 99.9 39.6 At1g02620 839269 GTP-binding protein (SAR1A) F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOF O.I. C.G. H.G.
82.3 99.9 8.6 At3g30740 3769121 - F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
81.9 99.9 29.2 At4g28090 828925 sks10 (SKU5 Similar 10) F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA O.I. C.G. H.G.
81.5 99.9 16.8 At4g25410 828644 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFM O.I. C.G. H.G.
81.1 99.9 21.4 At1g28080 839701 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
81.1 99.9 9.2 At4g12180 3769991 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
80.5 99.9 25.3 At3g02590 820687 delta 7-sterol-C5-desaturase, putative F:oxidoreductase activity, C-5 sterol desaturase activity, iron ion binding;P:oxidation reduction, sterol biosynthetic process, fatty acid biosynthetic process;C:endoplasmic reticulum;OBFMP O.I. C.G. H.G.
80.0 99.9 17.7 At2g04820 3768606 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
79.9 99.9 20.5 At3g13280 820528 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
79.7 99.9 132.4 At5g40980 834100 unknown protein F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P O.I. C.G. H.G.
78.1 99.9 16.3 At1g69350 843267 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB O.I. C.G. H.G.
77.2 99.9 188.3 At1g70670 843404 caleosin-related family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO O.I. C.G. H.G.
76.6 99.9 16.7 At5g11820 831055 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
76.1 99.9 24.1 At2g24255 816960 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
76.0 99.9 46.1 At4g15160 827182 lipid binding / structural constituent of cell wall F:lipid binding, structural constituent of cell wall;P:lipid transport;C:endomembrane system;MBOPFVA O.I. C.G. H.G.
76.0 99.9 32.0 At5g26640 832725 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP O.I. C.G. H.G.
74.9 99.9 34.6 At2g05810 815132 armadillo/beta-catenin repeat family protein F:binding;P:unknown;C:cellular_component unknown;PMFO O.I. C.G. H.G.
74.7 99.9 525.3 At2g07727 815400 cytochrome b (MTCYB) (COB) (CYTB) F:electron carrier activity, oxidoreductase activity;P:respiratory electron transport chain;C:membrane;MOBPFA O.I. C.G. H.G.
74.5 99.9 13.9 At3g13680 820576 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
73.8 99.9 12.4 At1g43040 840903 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P O.I. C.G. H.G.
73.3 99.9 28.8 At1g52530 841684 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF O.I. C.G. H.G.
73.0 99.9 36.6 At1g67760 843101 ATP binding / protein binding / unfolded protein binding F:unfolded protein binding, protein binding, ATP binding;P:response to salt stress;C:cellular_component unknown;AMOFP O.I. C.G. H.G.
72.9 99.9 3.7 At3g29732 3769027 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
72.6 99.9 23.0 At5g30500 833137 galactinol synthase, putative F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO O.I. C.G. H.G.
72.5 99.9 22.0 At1g49260 841350 - F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
72.5 99.9 11.7 At1g31000 839986 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
72.3 99.9 21.0 At3g18770 821408 - F:unknown;P:unknown;C:chloroplast;OFMPBV O.I. C.G. H.G.
71.9 99.9 11.4 At1g47920 841210 syntaxin-related family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
71.6 99.9 614.3 At5g67600 836896 unknown protein F:unknown;P:unknown;C:plasma membrane;MOPFBV O.I. C.G. H.G.
71.2 99.9 9.1 At4g09860 826575 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
70.7 99.9 29.9 At3g42820 823326 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
70.7 99.9 17.6 At1g42450 3767252 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
69.7 99.9 26.0 At3g57440 824911 unknown protein F:unknown;P:unknown;C:unknown;P O.I. C.G. H.G.
69.5 99.9 15.1 At4g10490 826641 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:cellular_component unknown;POBFM O.I. C.G. H.G.
69.5 99.9 7.6 At3g30310 822731 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
69.2 99.9 20.4 At2g17310 816238 SON1 (SUPPRESSOR OF NIM1-1 1) Encodes an F-Box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance O.I. C.G. H.G.
69.2 99.9 17.6 At5g10880 830955 tRNA synthetase-related / tRNA ligase-related F:proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:prolyl-tRNA aminoacylation, translation;C:cytoplasm;BOMFAP O.I. C.G. H.G.
68.6 99.9 24.7 At1g72870 843618 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBO O.I. C.G. H.G.
68.6 99.9 16.0 At1g35880 840490 - F:molecular_function unknown;P:biological_process unknown;C:unknown;MPBOFA O.I. C.G. H.G.
68.3 99.9 29.0 At1g15830 838153 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVA O.I. C.G. H.G.
68.3 99.9 18.7 At5g66340 836766 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
68.3 99.9 18.4 At1g49900 841413 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFBVA O.I. C.G. H.G.
67.9 99.9 18.2 At1g01180 839239 unknown protein F:unknown;P:biological_process unknown;C:unknown;OBPM O.I. C.G. H.G.
67.7 99.9 31.5 At4g38000 829956 Dof-type zinc finger domain-containing protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO O.I. C.G. H.G.
66.7 99.8 19.4 At4g36105 829767 unknown protein F:molecular_function unknown;P:biological_process unknown;C:nucleus;MPOBFV O.I. C.G. H.G.
66.5 99.8 10.9 At1g77780 844115 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFO O.I. C.G. H.G.
66.3 99.8 9.9 At4g29450 829066 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
66.1 99.8 33.9 At2g40740 818669 WRKY55 member of WRKY Transcription Factor; Group III O.I. C.G. H.G.
66.1 99.8 29.9 At1g10810 837624 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:cellular_component unknown;BOFMPA O.I. C.G. H.G.
65.9 99.8 14.8 At1g66630 842981 seven in absentia (SINA) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOF O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
579.8	100.0	42.2	At1g33090	840205	MATE efflux family protein	F:drug transporter activity, antiporter activity, transporter activity;P:multidrug transport;C:membrane;BOPFAM	O.I.	C.G.	H.G.
315.3	100.0	47.8	At2g43580	818960	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBFOMV	O.I.	C.G.	H.G.
271.5	100.0	112.6	At1g09180	837438	ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)	A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.	O.I.	C.G.	H.G.
181.2	100.0	1885.7	At2g02930	814822	ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)	Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
168.7	100.0	32.1	At2g02380	814769	ATGSTZ2	Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002).	O.I.	C.G.	H.G.
168.3	100.0	23.3	At5g18880	832006	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
154.6	99.9	31.1	At2g16410	816139	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
151.1	99.9	90.0	At5g14670	831319	ATARFA1B (ADP-ribosylation factor A1B)	A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.	O.I.	C.G.	H.G.
141.7	99.9	43.0	At5g51290	835203	ceramide kinase-related	F:diacylglycerol kinase activity;P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway;C:cellular_component unknown;MOPBF	O.I.	C.G.	H.G.
132.4	99.9	12.9	At2g17860	816296	pathogenesis-related thaumatin family protein	F:molecular_function unknown;P:response to other organism;C:endomembrane system;PMFBOV	O.I.	C.G.	H.G.
131.4	99.9	8.9	At2g10465	815506	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
128.8	99.9	25.4	At2g04560	814998	transferase, transferring glycosyl groups	F:transferase activity, transferring glycosyl groups;P:lipid A biosynthetic process;C:cellular_component unknown;OBP	O.I.	C.G.	H.G.
125.3	99.9	19.0	At1g06310	837141	ACX6 (ACYL-COA OXIDASE 6)	Encodes a putative acyl-CoA oxidase. However, no transcripts have been detected for this gene and no altered phenotypes have been detected in plants mutant for this gene. This suggests that ACX6 does not significantly contribute to seedling beta-oxidation of fatty acids or indole-3-butyric acid in vivo.	O.I.	C.G.	H.G.
124.3	99.9	36.5	At2g23960	816929	defense-related protein, putative	F:catalytic activity;P:defense response;C:cellular_component unknown;OBAFPM	O.I.	C.G.	H.G.
119.1	99.9	9.1	At1g39350	840697	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
116.4	99.9	38.4	At3g14630	820691	CYP72A9	putative cytochrome P450	O.I.	C.G.	H.G.
116.4	99.9	33.7	At1g79960	844336	OFP14 (OVATE FAMILY PROTEIN 14)	F:unknown;P:biological_process unknown;C:unknown;PFOM	O.I.	C.G.	H.G.
112.3	99.9	12.3	At5g32610	833243	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
111.7	99.9	17.8	At5g46120	834654	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
108.4	99.9	14.5	At1g43940	840993	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
105.1	99.9	15.6	At3g62380	825411	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;PO	O.I.	C.G.	H.G.
104.7	99.9	55.2	At2g15350	816027	FUT10 (FUCOSYLTRANSFERASE 10)	member of Glycosyltransferase Family- 37	O.I.	C.G.	H.G.
104.2	99.9	14.5	At3g05440	819709	C2 domain-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
103.6	99.9	10.5	At3g42980	823354	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
103.0	99.9	26.6	At1g76530	843986	auxin efflux carrier family protein	F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO	O.I.	C.G.	H.G.
102.0	99.9	14.6	At1g50530	841475	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
101.4	99.9	33.0	At2g24840	817021	AGL61 (AGAMOUS-LIKE 61)	Encodes a member of the Agamous-like family of transcription factors. Localized to the nucleus in the central cell and endosperm of the female gametophyte. Loss of function mutations show reduced female fertility. Fifty percent of ovules have defective central cells with abnormal morphology and patterns of gene expression. Upon fertilization 50% of seeds abort. Using yeast two hybrid assays AGL61 was shown to interact with AGL80, another MADS box gene with similar defects in ovule development. These data suggest that AGL61 and 80 together are required for proper differentiation of the central cell.	O.I.	C.G.	H.G.
100.3	99.9	24.6	At3g29796	822693	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOP	O.I.	C.G.	H.G.
99.9	99.9	43.1	At2g16360	816132	40S ribosomal protein S25 (RPS25A)	F:structural constituent of ribosome;P:translation;C:in 6 components;MFPO	O.I.	C.G.	H.G.
97.7	99.9	30.2	At4g38880	830043	ATASE3 (GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 3)	GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2	O.I.	C.G.	H.G.
97.7	99.9	22.7	At3g57130	824880	BOP1 (BLADE ON PETIOLE 1)	ankyrin repeat family protein / BTB/POZ domain-containing protein, contains Pfam domain, PF00023: Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain. Lines carrying recessive mutations exhibit a number of visible defects, most pronounced being ectopic outgrowths of in leaf petioles of rosette leaves.Along with bop2, bop1 is required for nectary development and formation of normal abscission zones.	O.I.	C.G.	H.G.
95.7	99.9	19.1	At5g35300	833484	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
93.8	99.9	11.7	At3g26040	822201	transferase family protein	F:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PF	O.I.	C.G.	H.G.
92.8	99.9	23.8	At2g04060	814940	beta-galactosidase, putative / lactase, putative	F:cation binding, beta-galactosidase activity, catalytic activity;P:carbohydrate metabolic process;C:beta-galactosidase complex;PMO	O.I.	C.G.	H.G.
92.6	99.9	33.2	At5g50820	835154	anac097 (Arabidopsis NAC domain containing protein 97)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	O.I.	C.G.	H.G.
92.5	99.9	15.1	At2g17600	816267	DC1 domain-containing protein	F:unknown;P:unknown;C:unknown;POM	O.I.	C.G.	H.G.
90.1	99.9	25.2	At5g55650	835659	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
90.1	99.9	24.3	At3g49150	824076	-	F:molecular_function unknown;P:protein insertion into membrane;C:integral to membrane;PMF	O.I.	C.G.	H.G.
89.8	99.9	21.4	At1g64560	842764	-	pseudogene of S-adenosylmethionine-dependent methyltransferase/rRNA (adenine-N6,N6-)-dimethyltransferase/rRNA methyltransferase	O.I.	C.G.	H.G.
89.4	99.9	19.1	At3g53790	824546	TRFL4 (TRF-LIKE 4)	Arabidopsis thaliana telomere-binding protein, putative (At3g53790)	O.I.	C.G.	H.G.
89.1	99.9	17.8	At2g12910	3768701	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
88.7	99.9	5.0	At4g07550	3770366	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
87.9	99.9	9.9	At1g32680	840162	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
87.3	99.9	31.5	At2g37910	818367	cation/hydrogen exchanger, putative (CHX21)	F:monovalent cation:proton antiporter activity;P:cation transport;C:endomembrane system;P	O.I.	C.G.	H.G.
86.9	99.9	25.3	At1g65350	842845	UBQ13	polyubiquitin gene,Columbia ecotype revealed that the gene contained a 3.9-kb insertion in the coding region from mitochondrial DNA.	O.I.	C.G.	H.G.
86.6	99.9	18.4	At3g42550	823265	aspartic-type endopeptidase	F:aspartic-type endopeptidase activity;P:proteolysis;C:endomembrane system;PMFO	O.I.	C.G.	H.G.
86.5	99.9	37.3	At3g45130	823649	LAS1	F:lanosterol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:cellular_component unknown;BPOFMA	O.I.	C.G.	H.G.
85.6	99.9	28.5	At1g72860	843617	disease resistance protein (TIR-NBS-LRR class), putative	F:transmembrane receptor activity, protein binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFA	O.I.	C.G.	H.G.
83.2	99.9	34.5	At2g31050	817657	plastocyanin-like domain-containing protein	F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;POA	O.I.	C.G.	H.G.
82.6	99.9	23.1	At3g59610	825130	F-box family protein / jacalin lectin family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO	O.I.	C.G.	H.G.
82.4	99.9	39.6	At1g02620	839269	GTP-binding protein (SAR1A)	F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOF	O.I.	C.G.	H.G.
82.3	99.9	8.6	At3g30740	3769121	-	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
81.9	99.9	29.2	At4g28090	828925	sks10 (SKU5 Similar 10)	F:oxidoreductase activity, copper ion binding;P:unknown;C:endomembrane system;FBPMOA	O.I.	C.G.	H.G.
81.5	99.9	16.8	At4g25410	828644	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;PFM	O.I.	C.G.	H.G.
81.1	99.9	21.4	At1g28080	839701	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
81.1	99.9	9.2	At4g12180	3769991	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
80.5	99.9	25.3	At3g02590	820687	delta 7-sterol-C5-desaturase, putative	F:oxidoreductase activity, C-5 sterol desaturase activity, iron ion binding;P:oxidation reduction, sterol biosynthetic process, fatty acid biosynthetic process;C:endoplasmic reticulum;OBFMP	O.I.	C.G.	H.G.
80.0	99.9	17.7	At2g04820	3768606	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
79.9	99.9	20.5	At3g13280	820528	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
79.7	99.9	132.4	At5g40980	834100	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;P	O.I.	C.G.	H.G.
78.1	99.9	16.3	At1g69350	843267	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFB	O.I.	C.G.	H.G.
77.2	99.9	188.3	At1g70670	843404	caleosin-related family protein	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PFO	O.I.	C.G.	H.G.
76.6	99.9	16.7	At5g11820	831055	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
76.1	99.9	24.1	At2g24255	816960	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
76.0	99.9	46.1	At4g15160	827182	lipid binding / structural constituent of cell wall	F:lipid binding, structural constituent of cell wall;P:lipid transport;C:endomembrane system;MBOPFVA	O.I.	C.G.	H.G.
76.0	99.9	32.0	At5g26640	832725	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOP	O.I.	C.G.	H.G.
74.9	99.9	34.6	At2g05810	815132	armadillo/beta-catenin repeat family protein	F:binding;P:unknown;C:cellular_component unknown;PMFO	O.I.	C.G.	H.G.
74.7	99.9	525.3	At2g07727	815400	cytochrome b (MTCYB) (COB) (CYTB)	F:electron carrier activity, oxidoreductase activity;P:respiratory electron transport chain;C:membrane;MOBPFA	O.I.	C.G.	H.G.
74.5	99.9	13.9	At3g13680	820576	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
73.8	99.9	12.4	At1g43040	840903	auxin-responsive protein, putative	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;P	O.I.	C.G.	H.G.
73.3	99.9	28.8	At1g52530	841684	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF	O.I.	C.G.	H.G.
73.0	99.9	36.6	At1g67760	843101	ATP binding / protein binding / unfolded protein binding	F:unfolded protein binding, protein binding, ATP binding;P:response to salt stress;C:cellular_component unknown;AMOFP	O.I.	C.G.	H.G.
72.9	99.9	3.7	At3g29732	3769027	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
72.6	99.9	23.0	At5g30500	833137	galactinol synthase, putative	F:transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups;P:carbohydrate biosynthetic process;C:cellular_component unknown;PMFVBO	O.I.	C.G.	H.G.
72.5	99.9	22.0	At1g49260	841350	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
72.5	99.9	11.7	At1g31000	839986	F-box family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
72.3	99.9	21.0	At3g18770	821408	-	F:unknown;P:unknown;C:chloroplast;OFMPBV	O.I.	C.G.	H.G.
71.9	99.9	11.4	At1g47920	841210	syntaxin-related family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
71.6	99.9	614.3	At5g67600	836896	unknown protein	F:unknown;P:unknown;C:plasma membrane;MOPFBV	O.I.	C.G.	H.G.
71.2	99.9	9.1	At4g09860	826575	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
70.7	99.9	29.9	At3g42820	823326	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
70.7	99.9	17.6	At1g42450	3767252	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
69.7	99.9	26.0	At3g57440	824911	unknown protein	F:unknown;P:unknown;C:unknown;P	O.I.	C.G.	H.G.
69.5	99.9	15.1	At4g10490	826641	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:cellular_component unknown;POBFM	O.I.	C.G.	H.G.
69.5	99.9	7.6	At3g30310	822731	transposable element gene	F:unknown;P:unknown;C:unknown	O.I.	C.G.	H.G.
69.2	99.9	20.4	At2g17310	816238	SON1 (SUPPRESSOR OF NIM1-1 1)	Encodes an F-Box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance	O.I.	C.G.	H.G.
69.2	99.9	17.6	At5g10880	830955	tRNA synthetase-related / tRNA ligase-related	F:proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:prolyl-tRNA aminoacylation, translation;C:cytoplasm;BOMFAP	O.I.	C.G.	H.G.
68.6	99.9	24.7	At1g72870	843618	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PBO	O.I.	C.G.	H.G.
68.6	99.9	16.0	At1g35880	840490	-	F:molecular_function unknown;P:biological_process unknown;C:unknown;MPBOFA	O.I.	C.G.	H.G.
68.3	99.9	29.0	At1g15830	838153	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MBOPFVA	O.I.	C.G.	H.G.
68.3	99.9	18.7	At5g66340	836766	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
68.3	99.9	18.4	At1g49900	841413	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFBVA	O.I.	C.G.	H.G.
67.9	99.9	18.2	At1g01180	839239	unknown protein	F:unknown;P:biological_process unknown;C:unknown;OBPM	O.I.	C.G.	H.G.
67.7	99.9	31.5	At4g38000	829956	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	O.I.	C.G.	H.G.
66.7	99.8	19.4	At4g36105	829767	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:nucleus;MPOBFV	O.I.	C.G.	H.G.
66.5	99.8	10.9	At1g77780	844115	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFO	O.I.	C.G.	H.G.
66.3	99.8	9.9	At4g29450	829066	leucine-rich repeat protein kinase, putative	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
66.1	99.8	33.9	At2g40740	818669	WRKY55	member of WRKY Transcription Factor; Group III	O.I.	C.G.	H.G.
66.1	99.8	29.9	At1g10810	837624	aldo/keto reductase family protein	F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:cellular_component unknown;BOFMPA	O.I.	C.G.	H.G.
65.9	99.8	14.8	At1g66630	842981	seven in absentia (SINA) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOF	O.I.	C.G.	H.G.

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GSM ID	GSM176878
Assay name	AWP_AL_Txed_2
GSE experiment	GSE7334: Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress

Microarray experiments to specifically-expressed genes

GSM ID GSM176878 Assay name AWP_AL_Txed_2 GSE experiment GSE7334: Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress

GSM ID GSM176878

Assay name AWP_AL_Txed_2

GSE experiment GSE7334: Microarray Analysis of Arabidopsis Genome Response to Aluminum Stress