CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM173621

Assay name Col-0 rep1

GSE experiment GSE7227: microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
157.3 99.9 51.4 At1g80340 844374 GA3OX2 (GIBBERELLIN 3-OXIDASE 2) Encodes a protein with gibberellin 3 β-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20. O.I. C.G. H.G.
111.4 99.9 62.1 At2g26040 817145 Bet v I allergen family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO O.I. C.G. H.G.
75.0 99.9 317.7 At5g14450 831296 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOM O.I. C.G. H.G.
59.2 99.8 87.4 At3g23800 821962 SBP3 (selenium-binding protein 3) F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA O.I. C.G. H.G.
56.4 99.8 134.7 At1g43780 840974 scpl44 (serine carboxypeptidase-like 44) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO O.I. C.G. H.G.
56.4 99.8 91.0 At5g13870 831233 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4) EXGT-A4, endoxyloglucan transferase, O.I. C.G. H.G.
56.2 99.8 51.1 At3g48700 824031 ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13) F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV O.I. C.G. H.G.
47.0 99.8 258.3 At3g45310 823669 cysteine proteinase, putative F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF O.I. C.G. H.G.
45.7 99.8 34.0 At4g38210 829977 ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20) expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
45.1 99.8 107.7 At1g33790 840271 jacalin lectin family protein F:unknown;P:biological_process unknown;C:chloroplast;PO O.I. C.G. H.G.
42.5 99.8 26.5 At2g40220 818614 ABI4 (ABA INSENSITIVE 4) encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Expressed most abundantly in developing siliques and to a lesser degree in seedlings. O.I. C.G. H.G.
41.8 99.8 184.1 At5g56260 835725 dimethylmenaquinone methyltransferase family protein F:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFM O.I. C.G. H.G.
39.1 99.8 236.6 At5g08260 830722 scpl35 (serine carboxypeptidase-like 35) F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB O.I. C.G. H.G.
33.6 99.7 130.2 At1g64970 842805 G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE) gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves O.I. C.G. H.G.
30.7 99.7 143.0 At2g37640 818341 EXP3 member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. O.I. C.G. H.G.
30.0 99.7 157.2 At2g47780 819390 rubber elongation factor (REF) protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
28.6 99.7 297.1 At5g03860 831690 MLS (MALATE SYNTHASE) Encodes a protein with malate synthase activity. O.I. C.G. H.G.
28.2 99.7 182.6 At4g12910 826903 scpl20 (serine carboxypeptidase-like 20) F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB O.I. C.G. H.G.
27.7 99.7 41.9 At1g29080 839783 peptidase C1A papain family protein F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
27.4 99.7 47.8 At1g60090 842304 BGLU4 (BETA GLUCOSIDASE 4) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA O.I. C.G. H.G.
27.3 99.7 241.5 At4g36880 829841 CP1 (CYSTEINE PROTEINASE1) F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis, response to gibberellin stimulus, response to red light;C:endomembrane system;MOPVBAF O.I. C.G. H.G.
26.8 99.7 190.4 At1g73120 843643 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:unknown;P O.I. C.G. H.G.
26.1 99.7 181.6 At1g02640 837940 BXL2 (BETA-XYLOSIDASE 2) encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members. O.I. C.G. H.G.
24.3 99.6 222.0 At2g30970 817648 ASP1 (ASPARTATE AMINOTRANSFERASE 1) ASPARTATE AMINOTRANSFERASE 1 O.I. C.G. H.G.
23.9 99.6 70.8 At5g14570 831308 ATNRT2.7 (Arabidopsis thaliana high affinity nitrate transporter 2.7) Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane. O.I. C.G. H.G.
23.3 99.6 69.9 At5g19520 832072 MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9) F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV O.I. C.G. H.G.
23.3 99.6 27.0 At1g48660 841288 auxin-responsive GH3 family protein F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMF O.I. C.G. H.G.
22.3 99.6 14.3 At5g17490 831615 RGL3 (RGA-LIKE PROTEIN 3) DELLA subfamily member involved in GA signal transduction O.I. C.G. H.G.
22.0 99.6 101.6 At4g26210 828727 mitochondrial ATP synthase g subunit family protein F:hydrogen ion transmembrane transporter activity;P:proton transport, ATP synthesis coupled proton transport;C:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o);PO O.I. C.G. H.G.
21.9 99.6 181.7 At5g05290 830411 ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2) Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) O.I. C.G. H.G.
21.5 99.6 49.8 At3g03450 821251 RGL2 (RGA-LIKE 2) Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development. O.I. C.G. H.G.
20.5 99.6 103.5 At4g16210 827314 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPA O.I. C.G. H.G.
20.1 99.6 232.0 At5g42890 834300 SCP2 (STEROL CARRIER PROTEIN 2) F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPB O.I. C.G. H.G.
19.6 99.6 178.7 At2g22780 816808 PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1) encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA. O.I. C.G. H.G.
19.6 99.6 24.3 At4g24660 828568 ATHB22 (HOMEOBOX PROTEIN 22) F:transcription factor activity, DNA binding;P:embryonic development ending in seed dormancy;C:nucleus;PM O.I. C.G. H.G.
19.4 99.6 404.6 At3g21720 821726 ICL (ISOCITRATE LYASE) Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL). O.I. C.G. H.G.
19.4 99.6 211.1 At3g06860 819870 MFP2 (MULTIFUNCTIONAL PROTEIN 2) Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes. O.I. C.G. H.G.
19.3 99.6 10.2 At1g65340 842842 CYP96A3 member of CYP96A O.I. C.G. H.G.
18.6 99.5 48.7 At3g59650 825134 mitochondrial ribosomal protein L51/S25/CI-B8 family protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MFOP O.I. C.G. H.G.
18.3 99.5 58.5 At4g36910 829844 LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) Has a cystathionine Beta-synthase domain. O.I. C.G. H.G.
17.9 99.5 89.6 At1g10522 837593 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
17.8 99.5 139.2 At4g30810 829204 scpl29 (serine carboxypeptidase-like 29) F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB O.I. C.G. H.G.
17.8 99.5 88.9 At4g30800 829203 40S ribosomal protein S11 (RPS11B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;MOBAFP O.I. C.G. H.G.
17.7 99.5 21.7 At5g24990 832569 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM O.I. C.G. H.G.
17.2 99.5 110.5 At1g43800 840977 acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM O.I. C.G. H.G.
16.7 99.5 11.0 At1g72570 843589 DNA binding / transcription factor F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBV O.I. C.G. H.G.
16.6 99.5 6.2 At2g18620 816377 geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative F:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFAMV O.I. C.G. H.G.
16.3 99.5 63.6 At3g47800 823934 aldose 1-epimerase family protein F:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;BOMFPA O.I. C.G. H.G.
16.1 99.5 109.4 At1g49410 841365 TOM6 (translocase of the outer mitochondrial membrane 6) F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
16.1 99.5 44.5 At2g27775 817324 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
16.0 99.5 55.3 At5g63810 836501 BGAL10 (beta-galactosidase 10) member of Glycoside Hydrolase Family 35 O.I. C.G. H.G.
16.0 99.5 26.4 At4g16230 827317 carboxylesterase/ hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM O.I. C.G. H.G.
15.9 99.5 25.9 At3g18510 821381 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.6 99.5 73.7 At5g46180 834660 delta-OAT ornithine delta-aminotransferase O.I. C.G. H.G.
15.5 99.5 75.1 At5g23310 832395 FSD3 (FE SUPEROXIDE DISMUTASE 3) Fe superoxide dismutase O.I. C.G. H.G.
15.5 99.5 23.7 At4g29430 829064 rps15ae (ribosomal protein S15A E) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF O.I. C.G. H.G.
15.3 99.4 24.3 At1g23100 838918 10 kDa chaperonin, putative F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV O.I. C.G. H.G.
15.2 99.4 27.4 At5g44460 834473 calcium-binding protein, putative F:calcium ion binding;P:response to cadmium ion;C:unknown;MPFOB O.I. C.G. H.G.
15.0 99.4 38.0 At3g05190 819683 aminotransferase class IV family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM O.I. C.G. H.G.
15.0 99.4 28.7 At1g64185 842723 lactoylglutathione lyase family protein / glyoxalase I family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;PBO O.I. C.G. H.G.
14.6 99.4 70.1 At2g19590 816478 ACO1 (ACC OXIDASE 1) encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase O.I. C.G. H.G.
14.6 99.4 26.4 At5g45920 834632 carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds F:hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;FPBMO O.I. C.G. H.G.
14.5 99.4 203.5 At5g20950 832220 glycosyl hydrolase family 3 protein F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall, membrane, plant-type cell wall;BOFPAM O.I. C.G. H.G.
14.3 99.4 6.0 At1g47620 841171 CYP96A8 member of CYP96A O.I. C.G. H.G.
14.1 99.4 102.5 At5g45670 834606 GDSL-motif lipase/hydrolase family protein F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
14.0 99.4 167.9 At1g06290 837140 ACX3 (ACYL-COA OXIDASE 3) Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. O.I. C.G. H.G.
13.9 99.4 135.6 At1g15500 838120 ATNTT2 F:ATP:ADP antiporter activity;P:transport;C:mitochondrion, chloroplast, plastid, chloroplast envelope, cytoplasm;BOPFM O.I. C.G. H.G.
13.5 99.4 167.9 At2g21580 816696 40S ribosomal protein S25 (RPS25B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, plasma membrane;MFPOA O.I. C.G. H.G.
13.5 99.4 21.8 At1g72070 843538 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMPFAV O.I. C.G. H.G.
13.4 99.4 62.6 At5g45650 834605 subtilase family protein F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM O.I. C.G. H.G.
13.4 99.4 44.4 At2g23110 816843 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
13.4 99.4 37.9 At4g24110 828511 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
13.3 99.4 22.7 At5g67060 836841 HEC1 (HECATE 1) F:transcription factor activity;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;PMBOFA O.I. C.G. H.G.
13.3 99.4 15.9 At4g39500 830104 CYP96A11 member of CYP96A O.I. C.G. H.G.
13.2 99.4 14.7 At5g41650 834167 lactoylglutathione lyase family protein / glyoxalase I family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;PBO O.I. C.G. H.G.
13.1 99.4 98.6 At3g02790 820985 zinc finger (C2H2 type) family protein F:transcription factor activity;P:regulation of transcription;C:intracellular;PO O.I. C.G. H.G.
13.0 99.4 33.1 At4g11120 826713 translation elongation factor Ts (EF-Ts), putative F:translation elongation factor activity;P:translational elongation;C:mitochondrion;BOPMF O.I. C.G. H.G.
13.0 99.4 24.1 At4g11060 826707 MTSSB (mitochondrially targeted single-stranded DNA binding protein) F:single-stranded DNA binding;P:unknown;C:unknown;BOMPV O.I. C.G. H.G.
12.6 99.3 20.5 At5g27410 832800 aminotransferase class IV family protein F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM O.I. C.G. H.G.
12.5 99.3 134.9 At3g44750 823605 HDA3 (HISTONE DEACETYLASE 3) Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. O.I. C.G. H.G.
12.5 99.3 66.5 At5g50370 835104 adenylate kinase, putative F:nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, ATP binding, phosphotransferase activity, phosphate group as acceptor;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process;C:mitochondrion, plasma membrane, plastid;BOMFPA O.I. C.G. H.G.
12.5 99.3 46.6 At5g38890 833880 exoribonuclease-related F:RNA binding;P:biological_process unknown;C:cellular_component unknown;FMAOP O.I. C.G. H.G.
12.4 99.3 97.0 At4g14440 827089 HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1) encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation O.I. C.G. H.G.
12.4 99.3 91.3 At5g66985 836833 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.4 99.3 52.6 At3g04770 819637 RPSAb (40S ribosomal protein SA B) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane;BMOAFP O.I. C.G. H.G.
12.4 99.3 40.0 At1g69526 843287 UbiE/COQ5 methyltransferase family protein F:methyltransferase activity;P:unknown;C:chloroplast;PBO O.I. C.G. H.G.
12.4 99.3 11.5 At3g51410 824304 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBFO O.I. C.G. H.G.
12.3 99.3 40.9 At3g05810 819750 unknown protein F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P O.I. C.G. H.G.
12.3 99.3 25.2 At5g09980 830859 PROPEP4 (Elicitor peptide 4 precursor) F:molecular_function unknown;P:response to jasmonic acid stimulus;C:endomembrane system;P O.I. C.G. H.G.
12.2 99.3 27.9 At1g71100 843450 RSW10 (RADIAL SWELLING 10) Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis. O.I. C.G. H.G.
12.1 99.3 121.0 At3g19130 821447 ATRBP47B (RNA-binding protein 47B) F:RNA binding;P:unknown;C:unknown;MOPFBAV O.I. C.G. H.G.
12.1 99.3 73.3 At3g23730 821955 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative F:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBO O.I. C.G. H.G.
12.1 99.3 34.0 At1g35550 840451 elongation factor Tu C-terminal domain-containing protein F:GTP binding, translation elongation factor activity;P:translational elongation;C:cellular_component unknown;MFOPA O.I. C.G. H.G.
12.0 99.3 172.3 At3g54110 824578 PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1) Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate. O.I. C.G. H.G.
12.0 99.3 123.2 At1g49600 841384 ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a) F:RNA binding;P:unknown;C:unknown;MOPFBVA O.I. C.G. H.G.
12.0 99.3 51.7 At1g76300 843963 SmD3 (snRNP core protein SmD3) F:molecular_function unknown;P:unknown;C:nuclear body, nucleolus, small nucleolar ribonucleoprotein complex, nucleus;MFOP O.I. C.G. H.G.
12.0 99.3 43.0 At2g29540 817503 ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT) RNA polymerase I(A) and III(C) 14 kDa subunit O.I. C.G. H.G.
11.9 99.3 199.6 At1g54000 841838 myrosinase-associated protein, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuolar membrane, plasma membrane, vacuole, plant-type cell wall, plant-type vacuole;PBOFM O.I. C.G. H.G.
11.9 99.3 83.2 At3g57490 824916 40S ribosomal protein S2 (RPS2D) F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, intracellular, membrane;BOMAFP O.I. C.G. H.G.
11.9 99.3 22.5 At4g36420 829794 ribosomal protein L12 family protein F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
157.3	99.9	51.4	At1g80340	844374	GA3OX2 (GIBBERELLIN 3-OXIDASE 2)	Encodes a protein with gibberellin 3 β-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20.	O.I.	C.G.	H.G.
111.4	99.9	62.1	At2g26040	817145	Bet v I allergen family protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
75.0	99.9	317.7	At5g14450	831296	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOM	O.I.	C.G.	H.G.
59.2	99.8	87.4	At3g23800	821962	SBP3 (selenium-binding protein 3)	F:selenium binding;P:unknown;C:cellular_component unknown;OMBPA	O.I.	C.G.	H.G.
56.4	99.8	134.7	At1g43780	840974	scpl44 (serine carboxypeptidase-like 44)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFBO	O.I.	C.G.	H.G.
56.4	99.8	91.0	At5g13870	831233	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	EXGT-A4, endoxyloglucan transferase,	O.I.	C.G.	H.G.
56.2	99.8	51.1	At3g48700	824031	ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13)	F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV	O.I.	C.G.	H.G.
47.0	99.8	258.3	At3g45310	823669	cysteine proteinase, putative	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPBVAF	O.I.	C.G.	H.G.
45.7	99.8	34.0	At4g38210	829977	ATEXPA20 (ARABIDOPSIS THALIANA EXPANSIN A20)	expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
45.1	99.8	107.7	At1g33790	840271	jacalin lectin family protein	F:unknown;P:biological_process unknown;C:chloroplast;PO	O.I.	C.G.	H.G.
42.5	99.8	26.5	At2g40220	818614	ABI4 (ABA INSENSITIVE 4)	encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.	O.I.	C.G.	H.G.
41.8	99.8	184.1	At5g56260	835725	dimethylmenaquinone methyltransferase family protein	F:ribonuclease inhibitor activity;P:regulation of RNA metabolic process;C:cellular_component unknown;BOPAFM	O.I.	C.G.	H.G.
39.1	99.8	236.6	At5g08260	830722	scpl35 (serine carboxypeptidase-like 35)	F:serine-type carboxypeptidase activity;P:proteolysis;C:endomembrane system;PMFOB	O.I.	C.G.	H.G.
33.6	99.7	130.2	At1g64970	842805	G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE)	gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves	O.I.	C.G.	H.G.
30.7	99.7	143.0	At2g37640	818341	EXP3	member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.	O.I.	C.G.	H.G.
30.0	99.7	157.2	At2g47780	819390	rubber elongation factor (REF) protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
28.6	99.7	297.1	At5g03860	831690	MLS (MALATE SYNTHASE)	Encodes a protein with malate synthase activity.	O.I.	C.G.	H.G.
28.2	99.7	182.6	At4g12910	826903	scpl20 (serine carboxypeptidase-like 20)	F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB	O.I.	C.G.	H.G.
27.7	99.7	41.9	At1g29080	839783	peptidase C1A papain family protein	F:cysteine-type endopeptidase activity, cysteine-type peptidase activity;P:proteolysis;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
27.4	99.7	47.8	At1g60090	842304	BGLU4 (BETA GLUCOSIDASE 4)	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA	O.I.	C.G.	H.G.
27.3	99.7	241.5	At4g36880	829841	CP1 (CYSTEINE PROTEINASE1)	F:cysteine-type peptidase activity, cysteine-type endopeptidase activity;P:proteolysis, response to gibberellin stimulus, response to red light;C:endomembrane system;MOPVBAF	O.I.	C.G.	H.G.
26.8	99.7	190.4	At1g73120	843643	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:unknown;P	O.I.	C.G.	H.G.
26.1	99.7	181.6	At1g02640	837940	BXL2 (BETA-XYLOSIDASE 2)	encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.	O.I.	C.G.	H.G.
24.3	99.6	222.0	At2g30970	817648	ASP1 (ASPARTATE AMINOTRANSFERASE 1)	ASPARTATE AMINOTRANSFERASE 1	O.I.	C.G.	H.G.
23.9	99.6	70.8	At5g14570	831308	ATNRT2.7 (Arabidopsis thaliana high affinity nitrate transporter 2.7)	Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.	O.I.	C.G.	H.G.
23.3	99.6	69.9	At5g19520	832072	MSL9 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9)	F:mechanically-gated ion channel activity;P:detection of mechanical stimulus;C:nucleus, plasma membrane, membrane;BOFPAV	O.I.	C.G.	H.G.
23.3	99.6	27.0	At1g48660	841288	auxin-responsive GH3 family protein	F:molecular_function unknown;P:response to auxin stimulus;C:cellular_component unknown;OPBMF	O.I.	C.G.	H.G.
22.3	99.6	14.3	At5g17490	831615	RGL3 (RGA-LIKE PROTEIN 3)	DELLA subfamily member involved in GA signal transduction	O.I.	C.G.	H.G.
22.0	99.6	101.6	At4g26210	828727	mitochondrial ATP synthase g subunit family protein	F:hydrogen ion transmembrane transporter activity;P:proton transport, ATP synthesis coupled proton transport;C:mitochondrial proton-transporting ATP synthase complex, coupling factor F(o);PO	O.I.	C.G.	H.G.
21.9	99.6	181.7	At5g05290	830411	ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)	Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)	O.I.	C.G.	H.G.
21.5	99.6	49.8	At3g03450	821251	RGL2 (RGA-LIKE 2)	Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.	O.I.	C.G.	H.G.
20.5	99.6	103.5	At4g16210	827314	ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A)	F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPA	O.I.	C.G.	H.G.
20.1	99.6	232.0	At5g42890	834300	SCP2 (STEROL CARRIER PROTEIN 2)	F:sterol carrier activity, oxidoreductase activity;P:glyoxylate metabolic process, intracellular lipid transport, fatty acid beta-oxidation, seed germination;C:peroxisome;MFOPB	O.I.	C.G.	H.G.
19.6	99.6	178.7	At2g22780	816808	PMDH1 (PEROXISOMAL NAD-MALATE DEHYDROGENASE 1)	encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.	O.I.	C.G.	H.G.
19.6	99.6	24.3	At4g24660	828568	ATHB22 (HOMEOBOX PROTEIN 22)	F:transcription factor activity, DNA binding;P:embryonic development ending in seed dormancy;C:nucleus;PM	O.I.	C.G.	H.G.
19.4	99.6	404.6	At3g21720	821726	ICL (ISOCITRATE LYASE)	Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).	O.I.	C.G.	H.G.
19.4	99.6	211.1	At3g06860	819870	MFP2 (MULTIFUNCTIONAL PROTEIN 2)	Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.	O.I.	C.G.	H.G.
19.3	99.6	10.2	At1g65340	842842	CYP96A3	member of CYP96A	O.I.	C.G.	H.G.
18.6	99.5	48.7	At3g59650	825134	mitochondrial ribosomal protein L51/S25/CI-B8 family protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;MFOP	O.I.	C.G.	H.G.
18.3	99.5	58.5	At4g36910	829844	LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2)	Has a cystathionine Beta-synthase domain.	O.I.	C.G.	H.G.
17.9	99.5	89.6	At1g10522	837593	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
17.8	99.5	139.2	At4g30810	829204	scpl29 (serine carboxypeptidase-like 29)	F:serine-type carboxypeptidase activity;P:proteolysis;C:vacuole;PMFOB	O.I.	C.G.	H.G.
17.8	99.5	88.9	At4g30800	829203	40S ribosomal protein S11 (RPS11B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit;MOBAFP	O.I.	C.G.	H.G.
17.7	99.5	21.7	At5g24990	832569	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POM	O.I.	C.G.	H.G.
17.2	99.5	110.5	At1g43800	840977	acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putative	F:acyl-[acyl-carrier-protein] desaturase activity, oxidoreductase activity, transition metal ion binding;P:fatty acid metabolic process, fatty acid biosynthetic process;C:membrane;PBOM	O.I.	C.G.	H.G.
16.7	99.5	11.0	At1g72570	843589	DNA binding / transcription factor	F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POBV	O.I.	C.G.	H.G.
16.6	99.5	6.2	At2g18620	816377	geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putative	F:unknown;P:isoprenoid biosynthetic process;C:unknown;OBPFAMV	O.I.	C.G.	H.G.
16.3	99.5	63.6	At3g47800	823934	aldose 1-epimerase family protein	F:aldose 1-epimerase activity;P:galactose metabolic process, hexose metabolic process, carbohydrate metabolic process;C:endomembrane system;BOMFPA	O.I.	C.G.	H.G.
16.1	99.5	109.4	At1g49410	841365	TOM6 (translocase of the outer mitochondrial membrane 6)	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
16.1	99.5	44.5	At2g27775	817324	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
16.0	99.5	55.3	At5g63810	836501	BGAL10 (beta-galactosidase 10)	member of Glycoside Hydrolase Family 35	O.I.	C.G.	H.G.
16.0	99.5	26.4	At4g16230	827317	carboxylesterase/ hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBOFM	O.I.	C.G.	H.G.
15.9	99.5	25.9	At3g18510	821381	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.6	99.5	73.7	At5g46180	834660	delta-OAT	ornithine delta-aminotransferase	O.I.	C.G.	H.G.
15.5	99.5	75.1	At5g23310	832395	FSD3 (FE SUPEROXIDE DISMUTASE 3)	Fe superoxide dismutase	O.I.	C.G.	H.G.
15.5	99.5	23.7	At4g29430	829064	rps15ae (ribosomal protein S15A E)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, mitochondrion, cytosolic ribosome, vacuole;BOMAPF	O.I.	C.G.	H.G.
15.3	99.4	24.3	At1g23100	838918	10 kDa chaperonin, putative	F:ATP binding;P:protein folding;C:mitochondrion;BOMPFV	O.I.	C.G.	H.G.
15.2	99.4	27.4	At5g44460	834473	calcium-binding protein, putative	F:calcium ion binding;P:response to cadmium ion;C:unknown;MPFOB	O.I.	C.G.	H.G.
15.0	99.4	38.0	At3g05190	819683	aminotransferase class IV family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM	O.I.	C.G.	H.G.
15.0	99.4	28.7	At1g64185	842723	lactoylglutathione lyase family protein / glyoxalase I family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
14.6	99.4	70.1	At2g19590	816478	ACO1 (ACC OXIDASE 1)	encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase	O.I.	C.G.	H.G.
14.6	99.4	26.4	At5g45920	834632	carboxylesterase/ hydrolase/ hydrolase, acting on ester bonds	F:hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:cellular_component unknown;FPBMO	O.I.	C.G.	H.G.
14.5	99.4	203.5	At5g20950	832220	glycosyl hydrolase family 3 protein	F:hydrolase activity, hydrolyzing O-glycosyl compounds;P:carbohydrate metabolic process;C:cell wall, membrane, plant-type cell wall;BOFPAM	O.I.	C.G.	H.G.
14.3	99.4	6.0	At1g47620	841171	CYP96A8	member of CYP96A	O.I.	C.G.	H.G.
14.1	99.4	102.5	At5g45670	834606	GDSL-motif lipase/hydrolase family protein	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
14.0	99.4	167.9	At1g06290	837140	ACX3 (ACYL-COA OXIDASE 3)	Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.	O.I.	C.G.	H.G.
13.9	99.4	135.6	At1g15500	838120	ATNTT2	F:ATP:ADP antiporter activity;P:transport;C:mitochondrion, chloroplast, plastid, chloroplast envelope, cytoplasm;BOPFM	O.I.	C.G.	H.G.
13.5	99.4	167.9	At2g21580	816696	40S ribosomal protein S25 (RPS25B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, ribosome, plasma membrane;MFPOA	O.I.	C.G.	H.G.
13.5	99.4	21.8	At1g72070	843538	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:unknown;BOMPFAV	O.I.	C.G.	H.G.
13.4	99.4	62.6	At5g45650	834605	subtilase family protein	F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOFAM	O.I.	C.G.	H.G.
13.4	99.4	44.4	At2g23110	816843	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.4	99.4	37.9	At4g24110	828511	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
13.3	99.4	22.7	At5g67060	836841	HEC1 (HECATE 1)	F:transcription factor activity;P:transmitting tissue development, carpel formation, regulation of transcription;C:nucleus;PMBOFA	O.I.	C.G.	H.G.
13.3	99.4	15.9	At4g39500	830104	CYP96A11	member of CYP96A	O.I.	C.G.	H.G.
13.2	99.4	14.7	At5g41650	834167	lactoylglutathione lyase family protein / glyoxalase I family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;PBO	O.I.	C.G.	H.G.
13.1	99.4	98.6	At3g02790	820985	zinc finger (C2H2 type) family protein	F:transcription factor activity;P:regulation of transcription;C:intracellular;PO	O.I.	C.G.	H.G.
13.0	99.4	33.1	At4g11120	826713	translation elongation factor Ts (EF-Ts), putative	F:translation elongation factor activity;P:translational elongation;C:mitochondrion;BOPMF	O.I.	C.G.	H.G.
13.0	99.4	24.1	At4g11060	826707	MTSSB (mitochondrially targeted single-stranded DNA binding protein)	F:single-stranded DNA binding;P:unknown;C:unknown;BOMPV	O.I.	C.G.	H.G.
12.6	99.3	20.5	At5g27410	832800	aminotransferase class IV family protein	F:catalytic activity;P:metabolic process;C:cellular_component unknown;OBPAFM	O.I.	C.G.	H.G.
12.5	99.3	134.9	At3g44750	823605	HDA3 (HISTONE DEACETYLASE 3)	Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.	O.I.	C.G.	H.G.
12.5	99.3	66.5	At5g50370	835104	adenylate kinase, putative	F:nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, adenylate kinase activity, ATP binding, phosphotransferase activity, phosphate group as acceptor;P:nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process;C:mitochondrion, plasma membrane, plastid;BOMFPA	O.I.	C.G.	H.G.
12.5	99.3	46.6	At5g38890	833880	exoribonuclease-related	F:RNA binding;P:biological_process unknown;C:cellular_component unknown;FMAOP	O.I.	C.G.	H.G.
12.4	99.3	97.0	At4g14440	827089	HCD1 (3-HYDROXYACYL-COA DEHYDRATASE 1)	encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation	O.I.	C.G.	H.G.
12.4	99.3	91.3	At5g66985	836833	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.4	99.3	52.6	At3g04770	819637	RPSAb (40S ribosomal protein SA B)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, cytosolic ribosome, chloroplast, membrane;BMOAFP	O.I.	C.G.	H.G.
12.4	99.3	40.0	At1g69526	843287	UbiE/COQ5 methyltransferase family protein	F:methyltransferase activity;P:unknown;C:chloroplast;PBO	O.I.	C.G.	H.G.
12.4	99.3	11.5	At3g51410	824304	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBFO	O.I.	C.G.	H.G.
12.3	99.3	40.9	At3g05810	819750	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:mitochondrion;P	O.I.	C.G.	H.G.
12.3	99.3	25.2	At5g09980	830859	PROPEP4 (Elicitor peptide 4 precursor)	F:molecular_function unknown;P:response to jasmonic acid stimulus;C:endomembrane system;P	O.I.	C.G.	H.G.
12.2	99.3	27.9	At1g71100	843450	RSW10 (RADIAL SWELLING 10)	Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.	O.I.	C.G.	H.G.
12.1	99.3	121.0	At3g19130	821447	ATRBP47B (RNA-binding protein 47B)	F:RNA binding;P:unknown;C:unknown;MOPFBAV	O.I.	C.G.	H.G.
12.1	99.3	73.3	At3g23730	821955	xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative	F:hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity;P:carbohydrate metabolic process, cellular glucan metabolic process;C:endomembrane system, cell wall, apoplast;PFBO	O.I.	C.G.	H.G.
12.1	99.3	34.0	At1g35550	840451	elongation factor Tu C-terminal domain-containing protein	F:GTP binding, translation elongation factor activity;P:translational elongation;C:cellular_component unknown;MFOPA	O.I.	C.G.	H.G.
12.0	99.3	172.3	At3g54110	824578	PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1)	Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.	O.I.	C.G.	H.G.
12.0	99.3	123.2	At1g49600	841384	ATRBP47A (Arabidopsis thaliana RNA-binding protein 47a)	F:RNA binding;P:unknown;C:unknown;MOPFBVA	O.I.	C.G.	H.G.
12.0	99.3	51.7	At1g76300	843963	SmD3 (snRNP core protein SmD3)	F:molecular_function unknown;P:unknown;C:nuclear body, nucleolus, small nucleolar ribonucleoprotein complex, nucleus;MFOP	O.I.	C.G.	H.G.
12.0	99.3	43.0	At2g29540	817503	ATRPC14 (RNA POLYMERASE 14 KDA SUBUNIT)	RNA polymerase I(A) and III(C) 14 kDa subunit	O.I.	C.G.	H.G.
11.9	99.3	199.6	At1g54000	841838	myrosinase-associated protein, putative	F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuolar membrane, plasma membrane, vacuole, plant-type cell wall, plant-type vacuole;PBOFM	O.I.	C.G.	H.G.
11.9	99.3	83.2	At3g57490	824916	40S ribosomal protein S2 (RPS2D)	F:structural constituent of ribosome;P:translation;C:cytosolic small ribosomal subunit, ribosome, intracellular, membrane;BOMAFP	O.I.	C.G.	H.G.
11.9	99.3	22.5	At4g36420	829794	ribosomal protein L12 family protein	F:structural constituent of ribosome;P:translation;C:ribosome, intracellular, large ribosomal subunit;BOPMF	O.I.	C.G.	H.G.

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GSM ID	GSM173621
Assay name	Col-0 rep1
GSE experiment	GSE7227: microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds

Microarray experiments to specifically-expressed genes

GSM ID GSM173621 Assay name Col-0 rep1 GSE experiment GSE7227: microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds

GSM ID GSM173621

Assay name Col-0 rep1

GSE experiment GSE7227: microRNA160 resistant AUXIN RESPONSE FACTOR10 (mARF10) germinating seeds