CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM173093

Assay name Rice OsSRT1 RNAi transgenic line LM2

GSE experiment GSE7197: Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
82.6 100.0 0.2 Os01g0170400 NM_194624.1 - HAT dimerisation domain containing protein 7e-2 At5g11090 serine-rich protein-related O.I. C.G. H.G.
65.4 99.9 1.8 Os02g0772100 AK064111.1 - Conserved hypothetical protein 3e-3 At1g23710 unknown protein O.I. C.G. H.G.
51.9 99.9 3.3 Os08g0539700 AK099855.1 - PibH8 protein 5e-1 At4g07940 unknown protein O.I. C.G. H.G.
43.3 99.9 4.8 Os04g0373400 9632.m02891 - Multi antimicrobial extrusion protein MatE familyprotein 2e-4 At5g52450 MATE efflux protein-related O.I. C.G. H.G.
42.0 99.9 12.8 Os04g0587500 AK060241.1 - Conserved hypothetical protein 2e-1 At5g56470 FAD-dependent oxidoreductase family protein O.I. C.G. H.G.
29.2 99.7 2.9 Os04g0674700 BI812716 - Amp-binding protein 1e+0 At3g18295 unknown protein O.I. C.G. H.G.
27.4 99.6 1.0 Os01g0227700 NM_188579.1 - Cytochrome P450 family protein 3e+0 At5g03050 unknown protein O.I. C.G. H.G.
24.7 99.4 0.6 Os12g0538600 9640.m03416 - GLUTAREDOXIN 2e-3 At4g15690 glutaredoxin family protein O.I. C.G. H.G.
24.3 99.4 3.1 Os01g0369900 AK100034.1 - NADH:flavin oxidoreductase/NADH oxidase familyprotein 6e-3 At1g76690 OPR2 O.I. C.G. H.G.
22.7 99.3 1.2 Os04g0419900 BM038551 - - 3e+0 At3g59490 unknown protein O.I. C.G. H.G.
22.0 99.3 31.3 Os03g0729300 AK108483.1 - Conserved hypothetical protein 1e-1 At5g65840 - O.I. C.G. H.G.
21.8 99.2 9.8 Os03g0129400 AK063857.1 - - 4e+0 At5g55570 unknown protein O.I. C.G. H.G.
21.8 99.2 8.2 Os01g0711600 AK099559.1 - Protein of unknown function DUF778 family protein 6e-7 At2g26070 RTE1 (REVERSION-TO-ETHYLENE SENSITIVITY1) O.I. C.G. H.G.
20.6 99.1 4.8 Os07g0537500 AK111734.1 - Protein kinase domain containing protein 7e-5 At4g23260 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase O.I. C.G. H.G.
20.3 99.1 14.6 Os01g0731100 AK109409.2 - Conserved hypothetical protein 6e-4 At1g78780 pathogenesis-related family protein O.I. C.G. H.G.
20.2 99.1 5.1 Os02g0744600 AK058756.1 - Hypothetical protein 9e-4 At4g13410 ATCSLA15 O.I. C.G. H.G.
19.2 99.0 17.3 Os11g0256900 CB657230 - Hypothetical protein 3e+0 At3g52070 unknown protein O.I. C.G. H.G.

Back to the CoP portal site

Back to the KAGIANA project homepage