CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM170930

Assay name abh1 -ABA repl2

GSE experiment GSE7112: Abscisic acid effect on wild type and the abh1 mutant

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
25.8 99.7 19.0 At1g29460 839822 auxin-responsive protein, putative F:molecular_function unknown;P:response to auxin stimulus;C:mitochondrion;P O.I. C.G. H.G.
19.5 99.6 29.9 At1g05200 839268 ATGLR3.4 member of Putative ligand-gated ion channel subunit family O.I. C.G. H.G.
16.9 99.5 87.7 At5g10180 830882 AST68 Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation. O.I. C.G. H.G.
15.1 99.4 18.3 At3g28130 822437 nodulin MtN21 family protein F:unknown;P:biological_process unknown;C:membrane;PBOMA O.I. C.G. H.G.
15.0 99.4 25.6 At4g16870 3770172 transposable element gene F:unknown;P:unknown;C:unknown O.I. C.G. H.G.
11.9 99.3 159.5 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. O.I. C.G. H.G.
11.5 99.3 16.9 At4g13345 826965 MEE55 (maternal effect embryo arrest 55) F:unknown;P:embryonic development ending in seed dormancy;C:membrane;MFPO O.I. C.G. H.G.
9.8 99.1 28.3 At4g22200 828311 AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3) Encodes a photosynthate- and light-dependent inward rectifying potassium channel with unique gating properties that are regulated by phosphorylation. Expressed in guard cell protoplasts and in the phloem and xylem of aerial portions of the plant. The channel can coassemble with another K+ channel, KAT1, in vitro. In guard cells, AKT2/3 is responsible for the Ca2+ sensitivity of the K+ uptake channel. In the phloem, it regulates the sucrose/H+ symporters via the phloem potential. O.I. C.G. H.G.
9.6 99.1 107.8 At5g61660 836288 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;BMOPFVA O.I. C.G. H.G.
9.6 99.1 52.3 At4g12980 826910 auxin-responsive protein, putative F:unknown;P:multicellular organismal development;C:membrane;PMFOB O.I. C.G. H.G.
9.4 99.1 10.0 At4g16880 827396 disease resistance protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOM O.I. C.G. H.G.
9.3 99.1 42.1 At2g43010 818903 PIF4 (phytochrome interacting factor 4) Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB. O.I. C.G. H.G.
9.0 99.1 4.3 At4g19850 827729 ATPP2-A2 encodes a protein similar to phloem protein 2 in cucumber. a member of a large gene family. O.I. C.G. H.G.
8.8 99.0 25.2 At1g16750 838246 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMOF O.I. C.G. H.G.

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