Microarray experiments to specifically-expressed genes

GSM ID GSM161221
Assay name cold treatment rep3
GSE experiment GSE6993: Barley low temperature stress

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
63.7100.00.2Contig18830_atContig18830--3e+0At5g21090leucine-rich repeat protein, putativeO.I.C.G.H.G.
49.699.95.2Contig18925_atContig18925--8e-3At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.C.G.H.G.
37.499.90.0HVSMEg0002C06r2_atHVSMEg0002C06r2--8e-1At1g06850AtbZIP52 (Arabidopsis thaliana basic leucine zipper 52)O.I.C.G.H.G.
37.299.90.0Contig23214_atContig23214--4e+0At5g10860CBS domain-containing proteinO.I.C.G.H.G.
34.699.96.6HVSMEb0012K08r2_atHVSMEb0012K08r2--3e-1At3g33293-O.I.C.G.H.G.
27.199.80.0EBro02_SQ004_E10_atEBro02_SQ004_E10--9e-1At4g01420CBL5 (CALCINEURIN B-LIKE PROTEIN 5)O.I.C.G.H.G.
25.099.82.3Contig18830_s_atContig18830--3e+0At5g21090leucine-rich repeat protein, putativeO.I.C.G.H.G.
24.599.87.9HVSMEa0020P01f_atHVSMEa0020P01f--3e+0At4g27590copper-binding protein-relatedO.I.C.G.H.G.
23.699.80.9HVSMEb0003M21r2_x_atHVSMEb0003M21r2--3e-1At2g18721unknown proteinO.I.C.G.H.G.
23.699.80.0EBpi01_SQ002_G23_atEBpi01_SQ002_G23--3e+0At5g57890anthranilate synthase beta subunit, putativeO.I.C.G.H.G.
22.999.80.0HVSMEg0010O10r2_atHVSMEg0010O10r2--8e-1At1g28815unknown proteinO.I.C.G.H.G.
21.799.81.6Contig2305_atContig2305--3e+0At1g65681-O.I.C.G.H.G.
21.399.70.0Contig17187_atContig17187--2e+0At5g26730-O.I.C.G.H.G.
21.299.72.9Contig7003_atContig7003--5e-1At3g13800metallo-beta-lactamase family proteinO.I.C.G.H.G.
20.599.70.0HVSMEl0014P01r2_atHVSMEl0014P01r2--3e+0At5g38910germin-like protein, putativeO.I.C.G.H.G.
19.699.71.6Contig2761_atContig2761--2e+0At5g40550unknown proteinO.I.C.G.H.G.
18.199.70.4EBpi01_SQ003_I06_atEBpi01_SQ003_I06--8e-1At5g63740zinc finger protein-relatedO.I.C.G.H.G.
18.099.75.2HVSMEn0014H06r2_s_atHVSMEn0014H06r2--4e-2At3g02150PTF1 (PLASTID TRANSCRIPTION FACTOR 1)O.I.C.G.H.G.
18.099.70.3Contig18525_atContig18525--3e-1At5g27810sequence-specific DNA binding / transcription factorO.I.C.G.H.G.
17.999.70.0HVSMEg0002G01r2_x_atHVSMEg0002G01r2--6e+0At5g39360EDL2 (EID1-like 2)O.I.C.G.H.G.
17.799.70.3HVSMEf0013N13r2_atHVSMEf0013N13r2--5e-1At5g2354026S proteasome regulatory subunit, putativeO.I.C.G.H.G.
17.699.610.0Contig10233_atContig10233--1e-1At1g14410WHY1 (WHIRLY 1)O.I.C.G.H.G.
17.299.633.4Contig6173_atContig6173--2e-36At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)O.I.C.G.H.G.
17.099.60.1Contig15405_s_atContig15405--3e+0At5g42500disease resistance-responsive family proteinO.I.C.G.H.G.
16.999.65.1Contig24328_atContig24328--1e+0At1g03055unknown proteinO.I.C.G.H.G.
16.999.62.5Contig6600_atContig6600--3e+0At1g02150pentatricopeptide (PPR) repeat-containing proteinO.I.C.G.H.G.
16.699.60.4Contig15356_atContig15356--5e-1At1g24440protein binding / zinc ion bindingO.I.C.G.H.G.
16.699.60.1HVSMEb0009P09r2_atHVSMEb0009P09r2--4e+0At1g55900TIM50O.I.C.G.H.G.
16.399.61.5Contig8437_atContig8437--1e-1At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.C.G.H.G.
16.399.60.0HVSMEh0095M04f_atHVSMEh0095M04f--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)O.I.C.G.H.G.
15.999.610.0Contig10158_atContig10158--8e-6At2g36885unknown proteinO.I.C.G.H.G.
15.899.63.4Contig24754_atContig24754--2e-1At5g61590AP2 domain-containing transcription factor family proteinO.I.C.G.H.G.
15.799.60.1Contig24229_atContig24229--3e-1At1g69526UbiE/COQ5 methyltransferase family proteinO.I.C.G.H.G.
15.699.61.4Contig14882_atContig14882--3e-3At5g08400unknown proteinO.I.C.G.H.G.
15.499.66.0Contig18583_atContig18583beta-ketoacyl-ACP synthase I-2e-51At5g46290KAS I (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I)O.I.C.G.H.G.
15.399.60.9Contig8356_s_atContig8356--8e-10At1g11190BFN1 (BIFUNCTIONAL NUCLEASE I)O.I.C.G.H.G.
15.299.50.0A06498.1_s_atA06498.1--9e-1At4g28350lectin protein kinase family proteinO.I.C.G.H.G.
15.199.50.0S0001000055C23F1_atS0001000055C23F1--2e+0At5g38660APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)O.I.C.G.H.G.
15.099.50.0HVSMEa0009I06r2_atHVSMEa0009I06r2--9e+0At5g59060unknown proteinO.I.C.G.H.G.
14.999.50.0Contig22658_atContig22658--2e+0At2g26370MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.C.G.H.G.
14.899.54.6Contig11355_s_atContig11355--3e-19At5g64050ERS (GLUTAMATE TRNA SYNTHETASE)O.I.C.G.H.G.
14.799.52.4Contig17073_atContig17073--2e+0At5g17470calmodulin-related protein, putativeO.I.C.G.H.G.
14.799.51.3EBro07_SQ002_K23_atEBro07_SQ002_K23--3e+0At3g14110FLU (FLUORESCENT IN BLUE LIGHT)O.I.C.G.H.G.
14.799.50.5HVSMEg0001J09r2_atHVSMEg0001J09r2--4e+0At1g72600hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
14.799.50.1Contig12503_atContig12503--7e+0At5g54490PBP1 (PINOID-BINDING PROTEIN 1)O.I.C.G.H.G.
14.599.55.0HVSMEa0011H12r2_x_atHVSMEa0011H12r2--3e-2At5g35680eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putativeO.I.C.G.H.G.
14.199.50.1HVSMEa0005F14r2_atHVSMEa0005F14r2--3e-24At4g02890UBQ14O.I.C.G.H.G.
14.099.50.0rbags1k23_atrbags1k23--1e+0Atmg01000-O.I.C.G.H.G.
13.899.51.7Contig20678_atContig20678--3e-1At4g31760peroxidase, putativeO.I.C.G.H.G.
13.799.50.8Contig8587_s_atContig8587--6e-13At1g21350antioxidant/ oxidoreductaseO.I.C.G.H.G.
13.799.50.6HV_CEb0009O04r2_atHV_CEb0009O04r2--1e+0At2g25890glycine-rich protein / oleosinO.I.C.G.H.G.
13.799.50.2Contig18959_atContig18959--6e-6At4g01050hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
13.699.50.0EBro08_SQ012_L20_atEBro08_SQ012_L20--7e-1At4g02950ubiquitin family proteinO.I.C.G.H.G.
13.599.57.1Contig17155_atContig17155--8e-12At3g08740elongation factor P (EF-P) family proteinO.I.C.G.H.G.
13.499.42.5Contig25611_atContig25611--2e-2At1g68870unknown proteinO.I.C.G.H.G.
13.499.41.2HVSMEc0019O14f_atHVSMEc0019O14f--5e+0At5g07960unknown proteinO.I.C.G.H.G.
13.499.40.3Contig8586_s_atContig8586--8e-6At1g21350antioxidant/ oxidoreductaseO.I.C.G.H.G.
13.499.40.0S0001100006F03F1_atS0001100006F03F1--7e-1At1g48912unknown proteinO.I.C.G.H.G.
13.399.40.1Contig17023_atContig17023--5e-1At1g63030ddf2 (DWARF AND DELAYED FLOWERING 2)O.I.C.G.H.G.
13.299.410.5Contig807_s_atContig807--6e-53At1g55490CPN60B (CHAPERONIN 60 BETA)O.I.C.G.H.G.
13.299.410.2Contig16582_atContig16582--9e+0At5g65730xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.C.G.H.G.
13.299.41.9Contig10346_atContig10346--8e-1At2g22080unknown proteinO.I.C.G.H.G.
13.299.40.3Contig16375_atContig16375--3e-1At5g59840Ras-related GTP-binding family proteinO.I.C.G.H.G.
13.299.40.0Contig22688_atContig22688--2e+0At2g01860EMB975 (EMBRYO DEFECTIVE 975)O.I.C.G.H.G.
13.199.40.7Contig13614_atContig13614--6e-5At3g10690DNA gyrase subunit A family proteinO.I.C.G.H.G.
13.099.40.6Contig4904_atContig4904--5e-4At2g34070unknown proteinO.I.C.G.H.G.
12.999.41.0Contig21442_atContig21442--4e-13At4g37510ribonuclease III family proteinO.I.C.G.H.G.
12.999.40.0HVSMEn0007B19f_x_atHVSMEn0007B19f--5e+0At4g05060vesicle-associated membrane family protein / VAMP family proteinO.I.C.G.H.G.
12.999.40.0HW03N10u_x_atHW03N10u--2e+0At2g29460ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4)O.I.C.G.H.G.
12.899.42.0Contig16541_atContig16541--5e+0At1g25682cell cycle control protein-relatedO.I.C.G.H.G.
12.899.40.0HB26G03r_atHB26G03r--9e-1At4g21970unknown proteinO.I.C.G.H.G.
12.799.40.2Contig11541_atContig11541--3e-1At2g05540glycine-rich proteinO.I.C.G.H.G.
12.699.410.9rbags36a18_s_atrbags36a18--2e+0At1g59722unknown proteinO.I.C.G.H.G.
12.699.44.2Contig10233_s_atContig10233--1e-1At1g14410WHY1 (WHIRLY 1)O.I.C.G.H.G.
12.699.41.6HK04L13r_s_atHK04L13r--4e+0At5g61240protein bindingO.I.C.G.H.G.
12.699.40.1Contig19278_atContig19278--1e-3At2g47890zinc finger (B-box type) family proteinO.I.C.G.H.G.
12.599.411.1Contig8458_atContig8458--1e-4At4g25640MATE efflux family proteinO.I.C.G.H.G.
12.599.41.9Contig12587_atContig12587--4e-1At5g64530XND1O.I.C.G.H.G.
12.599.40.1Contig22050_atContig22050--1e+0At2g28570unknown proteinO.I.C.G.H.G.
12.499.40.9Contig15863_atContig15863--3e+0At1g16430surfeit locus protein 5 family protein / SURF5 family proteinO.I.C.G.H.G.
12.499.40.7Contig9778_s_atContig9778--2e+0At3g02120hydroxyproline-rich glycoprotein family proteinO.I.C.G.H.G.
12.499.40.2EBma01_SQ005_J20_atEBma01_SQ005_J20--8e-1At1g77610glucose-6-phosphate/phosphate translocator-relatedO.I.C.G.H.G.
12.399.40.9HV_CEb0001A10f2_atHV_CEb0001A10f2--1e+1At5g42630ATS (ABERRANT TESTA SHAPE)O.I.C.G.H.G.
12.299.40.0HX08E06r_atHX08E06r--1e+0At3g58350meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.C.G.H.G.
12.199.32.8Contig9052_atContig9052--1e-4At1g08470strictosidine synthase family proteinO.I.C.G.H.G.
12.199.32.8EBro07_SQ002_G23_s_atEBro07_SQ002_G23--4e-2At3g10915reticulon family proteinO.I.C.G.H.G.
12.199.30.5Contig15225_atContig15225--4e-5At1g10510emb2004 (embryo defective 2004)O.I.C.G.H.G.
12.199.30.0Contig21846_atContig21846--3e-1At4g1810060S ribosomal protein L32 (RPL32A)O.I.C.G.H.G.
12.199.30.0HX06J21r_atHX06J21r--3e-1At4g28040nodulin MtN21 family proteinO.I.C.G.H.G.
12.099.30.0S0000800242C04F1_atS0000800242C04F1--1e+0At1g54530calcium-binding EF hand family proteinO.I.C.G.H.G.
11.899.30.3HV05G21u_x_atHV05G21u--1e+1At5g12110elongation factor 1B alpha-subunit 1 (eEF1Balpha1)O.I.C.G.H.G.
11.799.30.2Contig14824_atContig14824--8e+0At4g03965protein binding / zinc ion bindingO.I.C.G.H.G.
11.699.30.9Contig10986_atContig10986--2e-1At5g38400unknown proteinO.I.C.G.H.G.
11.699.30.6Contig12640_atContig12640--5e-1At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.C.G.H.G.
11.699.30.0Contig9205_atContig9205--5e-4At1g53470MSL4 (MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4)O.I.C.G.H.G.
11.699.30.0Contig949_atContig949--8e-28At1g29910CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3)O.I.C.G.H.G.
11.599.33.7Contig12146_atContig12146--2e+0At5g07500PEI1O.I.C.G.H.G.
11.599.30.3Contig10363_atContig10363--2e-1At4g09730DEAD/DEAH box helicase, putativeO.I.C.G.H.G.
11.599.30.2Contig9779_atContig9779--2e+0At2g15910CSL zinc finger domain-containing proteinO.I.C.G.H.G.
11.499.31.2HVSMEn0020J09f_atHVSMEn0020J09f--8e-1At3g13800metallo-beta-lactamase family proteinO.I.C.G.H.G.



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