Microarray experiments to specifically-expressed genes

GSM ID GSM159221
Assay name Seed (S5, 21 - 29 dap), biological rep 3
GSE experiment GSE6893: Expression data for reproductive development in rice

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
179.4100.015.2Os09g0457400AK063988.1-Alpha-amylase isozyme 3A precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase)8e-1At4g25000AMY1 (ALPHA-AMYLASE-LIKE)O.I.C.G.H.G.
97.3100.068.0Os02g0586900AK063583.1-Glycine rich family protein1e+0At2g16510vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5)O.I.C.G.H.G.
81.899.918.9Os06g0139800AK058604.1-Acid phosphatase-1(1) (Fragment)1e-2At4g29270acid phosphatase class B family proteinO.I.C.G.H.G.
80.199.981.9Os08g0104400AK064224.1-Conserved hypothetical protein2e-2At3g12960unknown proteinO.I.C.G.H.G.
70.199.944.0Os06g0110200AK107973.1-Late embryogenesis abundant (LEA) group 1 familyprotein1e+0At4g11250AGL52O.I.C.G.H.G.
67.599.9111.8Os01g0225600AK063645.1-Late embryogenesis abundant protein Lea14-A4e-1At1g01470LEA14 (LATE EMBRYOGENESIS ABUNDANT 14)O.I.C.G.H.G.
67.299.9174.5Os03g0693700AK103716.1-Oxalate oxidase 1 (EC 1.2.3.4) (Germin)8e+0At3g10080germin-like protein, putativeO.I.C.G.H.G.
67.099.98.5Os12g0151000AK107301.1-Purple acid phosphatase2e-1At3g46120PAP19 (PURPLE ACID PHOSPHATASE 19)O.I.C.G.H.G.
66.599.93.3Os02g0124400AK108718.1-Conserved hypothetical protein8e+0At5g57340unknown proteinO.I.C.G.H.G.
66.399.9220.4Os02g0644000AB081464.1-C13 endopeptidase NP1 (Fragment)2e-23At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)O.I.C.G.H.G.
58.999.9466.4Os07g0213600AK107696.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein3e-1At5g61660glycine-rich proteinO.I.C.G.H.G.
58.799.9712.9Os07g0214100D11431.1-Seed allergenic protein RA17 precursor5e+0At3g23760-O.I.C.G.H.G.
58.599.9185.3Os05g0569500AF049892.1--6e-10At1g05510-O.I.C.G.H.G.
58.499.93.4Os01g0958200AK107370.1-Curculin-like (mannose-binding) lectin domaincontaining protein3e+0At1g795002-dehydro-3-deoxyphosphooctonate aldolase / phospho-2-dehydro-3-deoxyoctonate aldolase / 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase (KDSA)O.I.C.G.H.G.
57.499.913.0Os01g0942300AK063126.1-Glucan endo-1,3-beta-glucosidase, acidic isoformprecursor (EC 3.2.1.39) ((1->3)-beta-glucanendohydrolase) ((1->3)-beta- glucanase)(Beta-1,3-endoglucanase)1e-2At5g20560beta-1,3-glucanase, putativeO.I.C.G.H.G.
56.399.952.6Os07g0222000AK107870.1--2e+1At5g47290myb family transcription factorO.I.C.G.H.G.
53.799.932.8Os03g0168100AK121575.1-Late embryogenesis abundant protein repeatcontaining protein1e-2At1g12665-O.I.C.G.H.G.
53.299.93.0Os05g0314700AK111406.1-Hypothetical protein3e+0At5g55870unknown proteinO.I.C.G.H.G.
52.799.95.0Os09g0479800AK109585.1-Phosphofructokinase family protein3e+0At5g47810PFK2 (PHOSPHOFRUCTOKINASE 2)O.I.C.G.H.G.
51.599.9623.4Os05g0432200BI803310-Gibberellin-regulated protein 2 precursor5e+0At4g16515unknown proteinO.I.C.G.H.G.
51.299.968.6Os05g0247800AK073843.1-Glycoside hydrolase, family 18 protein2e+0At1g64628CPuORF57 (Conserved peptide upstream open reading frame 57)O.I.C.G.H.G.
51.199.919.9Os01g0751600AK108569.1-Conserved hypothetical protein9e-7At5g50890-O.I.C.G.H.G.
50.999.93.1Os01g0678900AK107736.1-Hypothetical protein2e+0At3g46830ATRABA2C (ARABIDOPSIS RAB GTPASE HOMOLOG A2C)O.I.C.G.H.G.
49.199.991.8Os11g0427800AK061288.1-Plant lipid transfer protein/Par allergen familyprotein2e+0At5g53600glycosyl hydrolase family protein 17O.I.C.G.H.G.
47.399.959.3Os05g0329300M23743.1-Prolamin 76e+0At2g40830RHC1AO.I.C.G.H.G.
46.999.9354.1Os03g0197300AK102651.1-RmlC-like cupin family protein7e-2At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
46.399.9158.4Os02g0202400AK107368.1-Brittle-1 protein, chloroplast precursor8e-1At5g27690heavy-metal-associated domain-containing proteinO.I.C.G.H.G.
46.099.97.6Os01g0772900AK073362.1--4e-2At3g22740HMT3O.I.C.G.H.G.
45.799.915.3Os06g0207200AK062309.1-Conserved hypothetical protein1e+0At2g36210auxin-responsive family proteinO.I.C.G.H.G.
45.699.988.9Os09g0109600AK063582.1-Conserved hypothetical protein1e+0At3g57500unknown proteinO.I.C.G.H.G.
45.299.9390.5Os06g0133000AB066094.1-Granule-bound starch synthase I, chloroplastprecursor (EC 2.4.1.21)3e-7At1g32900starch synthase, putativeO.I.C.G.H.G.
45.199.964.8Os03g0159600AK106743.1-Rab28 protein1e+1At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.C.G.H.G.
45.199.913.7Os06g0341300AK107654.1-Seed maturation protein domain containing protein6e-1At5g63480unknown proteinO.I.C.G.H.G.
44.599.90.9Os02g0140200AK066454.1-Cycloartenol synthase (EC 5.4.99.8)(2,3-epoxysqualene--cycloartenol cyclase)9e-1At2g23340AP2 domain-containing transcription factor, putativeO.I.C.G.H.G.
44.099.9160.4Os01g0702500AY333185.1-Dehydrin RAB253e-5At3g50980XERO1 (DEHYDRIN XERO 1)O.I.C.G.H.G.
43.699.92.5Os01g0859300AK070998.1-ABA response element binding factor2e-7At2g36270ABI5 (ABA INSENSITIVE 5)O.I.C.G.H.G.
43.399.9166.4Os04g0510900AK063625.1-Embryo-specific protein 1 (ATS1)9e+0At1g23240caleosin-related family proteinO.I.C.G.H.G.
43.199.9169.0Os05g0381400AK102039.1-ABA induced plasma membrane protein PM 192e+0At2g01755unknown proteinO.I.C.G.H.G.
41.799.99.9Os09g0127700AK107885.1-Conserved hypothetical protein1e+0At4g11660AT-HSFB2BO.I.C.G.H.G.
41.499.922.8Os10g0548100AK107224.1-Conserved hypothetical protein6e-1At2g11005glycine-rich proteinO.I.C.G.H.G.
40.899.97.0Os02g02506009630.m01427-Late embryogenesis abundant protein repeatcontaining protein1e-2At1g75550glycine-rich proteinO.I.C.G.H.G.
39.999.994.7Os12g0269200BI801848-13 kDa prolamin precursor1e+0At4g13830J20 (DNAJ-LIKE 20)O.I.C.G.H.G.
39.999.959.4Os05g0140800AK110652.1-Glucose/ribitol dehydrogenase family protein7e-1At3g05260short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
39.499.94.9Os01g0756300AK069648.1-Conserved hypothetical protein1e-1At5g28630glycine-rich proteinO.I.C.G.H.G.
38.499.8582.1Os07g0214600NM_186509.1-Seed allergenic protein RA17 precursor4e+0At5g57450XRCC3O.I.C.G.H.G.
38.399.81.9Os03g0381500AK108125.1-Hypothetical protein4e-1At3g19150KRP6 (KIP-RELATED PROTEIN 6)O.I.C.G.H.G.
38.299.811.5Os07g0480900AK063422.1-Cysteine protease (Fragment)8e-7At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.C.G.H.G.
37.999.8247.4Os11g0454000U60097.2-Dehydrin family protein1e-7At5g66400RAB18 (RESPONSIVE TO ABA 18)O.I.C.G.H.G.
37.899.8325.0Os08g0327700AK107930.1-Late embryogenesis abundant (LEA) group 1 familyprotein2e+0At3g15340PPI2 (proton pump interactor 2)O.I.C.G.H.G.
37.899.893.7Os06g0324400AK063726.1-Late embryogenesis abundant (LEA) group 1 familyprotein1e+0At5g49600unknown proteinO.I.C.G.H.G.
37.699.8273.7Os05g0349800AK063677.1-Embryonic abundant protein 17e-3At3g51810EM1 (LATE EMBRYOGENESIS ABUNDANT 1)O.I.C.G.H.G.
37.599.8411.6Os07g0213800AK107215.1-Alpha-amylase inhibitor BMAI-1 precursor (AllergenHor v 1) (Alpha- amylase flour inhibitor) (Fragment)6e+0At4g22650-O.I.C.G.H.G.
37.599.811.6Os03g0623100AK063716.1-Conserved hypothetical protein1e-1At5g55570unknown proteinO.I.C.G.H.G.
37.299.848.5Os06g0507100AA753757-Gliadin/LMW glutenin family protein3e+0At1g66480PMI2 (plastid movement impaired 2)O.I.C.G.H.G.
36.899.84.7Os05g0104900AK069824.1-Carboxy terminus of Hsp70-interacting protein3e+0At5g28030cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putativeO.I.C.G.H.G.
36.099.835.5Os03g0277500AK063650.1-Glyoxalase/bleomycin resistanceprotein/dioxygenase domain containing protein2e+1At4g38260unknown proteinO.I.C.G.H.G.
35.999.8724.9Os06g0507200BI799580-Prolamin1e+0At1g15100RHA2AO.I.C.G.H.G.
35.799.8236.3Os03g0111300AK062506.1-Nonspecific lipid-transfer protein 2 (nsLTP2) (7kDa lipid transfer protein)3e-1At3g22275unknown proteinO.I.C.G.H.G.
35.599.81.2Os02g01862009630.m00845--8e-1At3g20130CYP705A22O.I.C.G.H.G.
35.399.82.9Os04g0104900AK069960.1-Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)(S-adenosysl-L- methionine:caffeic acid3-O-methyltransferase) (COMT) (CAOMT)2e-1At4g35150O-methyltransferase family 2 proteinO.I.C.G.H.G.
35.299.815.8Os01g0644200AY549310.1-Conserved hypothetical protein4e+0At3g03341unknown proteinO.I.C.G.H.G.
35.199.84.5Os06g0160200AK073443.1-Lanatoside 15'-O-acetylesterase precursor1e-5At4g01130acetylesterase, putativeO.I.C.G.H.G.
35.099.841.0Os08g0548300AK073266.1-Zn-finger, RING domain containing protein7e-1At1g21770-O.I.C.G.H.G.
34.299.835.9Os06g0498800AK107056.1-MOTHER of FT and TF1 protein4e-1At1g18100E12A11O.I.C.G.H.G.
34.099.8389.3Os03g0793700AY098743.2-Globulin 2 (Fragment)4e+0At4g36990HSF4 (HEAT SHOCK FACTOR 4)O.I.C.G.H.G.
33.899.8662.7Os02g0453600AA753290-RmlC-like cupin family protein4e+0At5g03455CDC25O.I.C.G.H.G.
33.899.8168.0Os07g0216600AK107674.1-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein5e+0At5g10980histone H3O.I.C.G.H.G.
33.899.84.5Os02g0709300AK109446.1-Conserved hypothetical protein2e-3At1g50640ERF3 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3)O.I.C.G.H.G.
33.499.8170.9Os07g0216700BI797025-Cereal seed allergen, trypsin/alpha-amylaseinhibitor family protein1e-1At1g22250unknown proteinO.I.C.G.H.G.
33.499.86.9Os10g0505900AK062588.1-Conserved hypothetical protein2e-1At4g08670protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
33.299.8161.8Os07g0638300AY336994.1-Peroxiredoxin 6 (EC 1.11.1.-) (Antioxidant protein2) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidiccalcium-independent phospholipase A2) (EC 3.1.1.-)(aiPLA2) (Non-selenium glutathione peroxidase) (EC1.11.1.7) (NSGPx) (24 kDa protein) (Liver 2D page spot40) (Red blood cells page spot 12)9e-3At1g48130ATPER1O.I.C.G.H.G.
33.199.8415.3Os10g0539600D13436.1-Protein kinase domain containing protein2e-8At4g35310CPK5 (calmodulin-domain protein kinase 5)O.I.C.G.H.G.
32.999.824.2Os02g0774200AK064163.1-Conserved hypothetical protein6e+0At5g26912unknown proteinO.I.C.G.H.G.
32.899.822.0Os11g0533400AK063652.1-Hypothetical protein2e+0At2g18050HIS1-3 (HISTONE H1-3)O.I.C.G.H.G.
32.499.818.6Os07g0212300BI801817-NUDIX hydrolase domain containing protein4e+0At5g01280-O.I.C.G.H.G.
31.899.76.8Os10g0177200AK064016.1-Calcium-binding EF-hand domain containing protein8e-1At2g28570unknown proteinO.I.C.G.H.G.
31.799.7336.3Os07g0214300X62091.1-Seed allergenic protein RAG2 precursor5e+0At2g40470LBD15 (LOB DOMAIN-CONTAINING PROTEIN 15)O.I.C.G.H.G.
31.399.7187.4Os03g0130300U72942.2-Cp-thionin3e-1At2g02100LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69)O.I.C.G.H.G.
30.799.78.3Os08g0296900AK073632.1-Octicosapeptide/Phox/Bem1p domain containingprotein1e-4At4g32070octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinO.I.C.G.H.G.
30.699.7132.0Os04g0404400AK112111.1-Bipartite response regulator, C-terminal effectordomain containing protein3e+0At5g45320-O.I.C.G.H.G.
30.699.714.3Os05g0568100AK069724.1-Nitrogen-fixing NifU-like, N-terminal domaincontaining protein5e-1At4g22220ISU1O.I.C.G.H.G.
30.399.725.3Os01g0839100AY077725.1-Zn-finger, C2H2 type domain containing protein2e+0At2g28710zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
30.299.7103.5Os07g0206400BI804080-13 kDa prolamin precursor6e+0At5g57370unknown proteinO.I.C.G.H.G.
29.799.713.7Os03g0842900AK107425.1-Short-chain dehydrogenase/reductase SDR familyprotein3e-3At3g47350short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
29.799.72.2Os03g0157700AK106245.1-Protein of unknown function DUF639 family protein3e-1At5g23390unknown proteinO.I.C.G.H.G.
29.599.7309.5Os01g0762500BI803155--5e+0At4g30750unknown proteinO.I.C.G.H.G.
29.599.78.6Os01g0743500AY444338.1-NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME)3e-47At5g11670ATNADP-ME2 (NADP-malic enzyme 2)O.I.C.G.H.G.
29.599.73.4Os08g0467500AK064041.1-Abscisic acid and stress inducible (A22) gene1e+0At3g26460major latex protein-related / MLP-relatedO.I.C.G.H.G.
29.499.7153.2Os11g0582400AF516927.1-Hypothetical protein2e-1At5g25020unknown proteinO.I.C.G.H.G.
29.399.774.3Os03g0734100AK119903.1-Conserved hypothetical protein1e+0At5g67070RALFL34 (ralf-like 34)O.I.C.G.H.G.
29.099.79.3Os03g0712800AK063913.1-Glutamine synthetase root isozyme 2 (EC 6.3.1.2)(Glutamate--ammonia ligase)4e-18At5g37600ATGSR1O.I.C.G.H.G.
28.999.63.2Os12g05067009640.m03127-VMP3 protein2e-1At3g59600NRPB8BO.I.C.G.H.G.
28.699.6130.0Os03g0340500AK102158.1-Sucrose synthase3e-14At4g02280SUS3 (sucrose synthase 3)O.I.C.G.H.G.
28.599.645.1Os12g06302009640.m04277-Antifungal protein R (Fragment)1e-1At3g55880unknown proteinO.I.C.G.H.G.
28.499.624.7Os12g0464400AK121922.1-Short-chain dehydrogenase/reductase SDR familyprotein4e-2At5g50700short-chain dehydrogenase/reductase (SDR) family proteinO.I.C.G.H.G.
28.299.6129.2Os01g0136100X60820.1-16.9 kDa class I heat shock protein1e-4At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.C.G.H.G.
28.199.60.4Os01g09632009629.m07251-Peroxidase BP 1 precursor1e-7At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.C.G.H.G.
28.099.631.1Os01g0136200AK121025.1-17.7 kDa heat shock protein1e-4At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.C.G.H.G.
28.099.66.3Os05g0474600AK059249.1-Aldose reductase (EC 1.1.1.21) (AR) (Aldehydereductase)4e-17At3g56140unknown proteinO.I.C.G.H.G.
27.699.63.0Os07g0522900AK071154.1-Ras small GTPase, Rab type family protein4e-10At3g21700SGP2O.I.C.G.H.G.



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