CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM159190

Assay name Young inflorescence (P1, upto 3 cm), biological rep 2

GSE experiment GSE6893: Expression data for reproductive development in rice

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
38.2 99.8 2.6 Os04g0488100 AY371047.1 - Rad21/Rec8 like protein, N-terminal domaincontaining protein 9e-2 At2g25880 AtAUR2 (AtAurora2) O.I. C.G. H.G.
37.5 99.8 43.2 Os08g0473900 M24287.1 - - 3e+0 At4g24640 APPB1 O.I. C.G. H.G.
31.7 99.7 18.9 Os05g0223300 AK069616.1 - RNA-binding protein 2e+1 Atcg01120 - O.I. C.G. H.G.
31.0 99.7 15.7 Os02g0756200 AK101655.1 - - 6e-1 At5g64260 EXL2 (EXORDIUM LIKE 2) O.I. C.G. H.G.
30.8 99.7 118.0 Os07g0591700 AK105325.1 - Conserved hypothetical protein 4e-1 At4g28085 unknown protein O.I. C.G. H.G.
29.3 99.7 75.9 Os10g0437500 AK107152.1 - Universal stress protein (Usp) family protein 2e+0 At1g71050 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related O.I. C.G. H.G.
29.2 99.7 4.9 Os03g0230000 AK105124.1 - Hypothetical protein 1e+0 At2g03350 unknown protein O.I. C.G. H.G.
28.6 99.6 2.5 Os04g0626500 AK069923.1 - Disease resistance protein RGA2 (RGA2-blb) (Blightresistance protein RPI) 2e+0 At1g23145 RALFL2 (RALF-LIKE 2) O.I. C.G. H.G.
28.3 99.6 51.9 Os04g0414500 AK121479.1 - Hypothetical protein 1e+0 At4g14710 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding O.I. C.G. H.G.
26.8 99.6 1.5 Os02g0816000 9630.m05674 - Anthranilate phosphoribosyltransferase-likeprotein 6e-3 At1g04150 C2 domain-containing protein O.I. C.G. H.G.
24.9 99.5 9.9 Os02g0269200 AK066218.1 - Dynein light chain, type 1 family protein 9e-2 Atmg01260 - O.I. C.G. H.G.
24.4 99.4 3.1 Os07g0581700 AY559047.1 - Homeodomain leucine zipper protein CPHB-4 9e-3 At5g66700 HB53 O.I. C.G. H.G.
23.7 99.4 1.8 Os05g0518200 AK107178.1 - Conserved hypothetical protein 3e-2 At5g55130 CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5) O.I. C.G. H.G.
22.8 99.3 16.7 Os07g0603300 AK066770.1 - Conserved hypothetical protein 2e+0 At5g12410 THUMP domain-containing protein O.I. C.G. H.G.
22.0 99.3 35.1 Os05g0361700 AK100184.1 - Ethylene responsive element binding factor3(OsERF3) 2e-3 At1g04778 unknown protein O.I. C.G. H.G.
21.9 99.3 6.3 Os06g0224200 AK067986.1 - Glutaredoxin domain containing protein 9e-2 At4g08550 electron carrier/ protein disulfide oxidoreductase O.I. C.G. H.G.
20.5 99.1 1.8 Os04g0664400 AB071292.1 - Auxin response factor 1 5e-10 At1g19850 MP (MONOPTEROS) O.I. C.G. H.G.
20.3 99.1 7.5 Os03g0823800 AK071234.1 - Xanthine/uracil/vitamin C permease family protein 1e-15 At1g60030 xanthine/uracil permease family protein O.I. C.G. H.G.
19.9 99.1 22.0 Os05g0223200 AK106308.1 - Glycine-rich RNA-binding protein GRP2A 2e+0 At5g50820 anac097 (Arabidopsis NAC domain containing protein 97) O.I. C.G. H.G.
19.7 99.1 8.9 Os10g0542400 AK068088.1 - Expansin/Lol pI family protein 2e+0 At3g23230 ethylene-responsive factor, putative O.I. C.G. H.G.
19.6 99.1 19.9 Os08g0156600 AK121377.1 - Major facilitator superfamily protein 8e-8 At3g47420 glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative O.I. C.G. H.G.
19.6 99.1 1.9 Os09g0402300 AK063300.1 - Phosphatidylinositol-4-phosphate 5-kinase familyprotein 5e-5 At1g71010 phosphatidylinositol-4-phosphate 5-kinase family protein O.I. C.G. H.G.
19.5 99.1 0.7 Os09g0246500 AK109459.1 - Conserved hypothetical protein 4e+0 At3g28530 UDP-glucose 4-epimerase O.I. C.G. H.G.
19.4 99.0 70.5 Os06g0142200 AB018376.1 - Early nodulin 93 ENOD93 protein family protein 1e-1 At5g12210 geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative O.I. C.G. H.G.
19.3 99.0 73.9 Os06g0142300 9634.m00419 - Early nodulin 93 ENOD93 protein family protein 2e-2 At4g12860 UNE14 (unfertilized embryo sac 14) O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
38.2	99.8	2.6	Os04g0488100	AY371047.1	-	Rad21/Rec8 like protein, N-terminal domaincontaining protein	9e-2	At2g25880	AtAUR2 (AtAurora2)	O.I.	C.G.	H.G.
37.5	99.8	43.2	Os08g0473900	M24287.1	-	-	3e+0	At4g24640	APPB1	O.I.	C.G.	H.G.
31.7	99.7	18.9	Os05g0223300	AK069616.1	-	RNA-binding protein	2e+1	Atcg01120	-	O.I.	C.G.	H.G.
31.0	99.7	15.7	Os02g0756200	AK101655.1	-	-	6e-1	At5g64260	EXL2 (EXORDIUM LIKE 2)	O.I.	C.G.	H.G.
30.8	99.7	118.0	Os07g0591700	AK105325.1	-	Conserved hypothetical protein	4e-1	At4g28085	unknown protein	O.I.	C.G.	H.G.
29.3	99.7	75.9	Os10g0437500	AK107152.1	-	Universal stress protein (Usp) family protein	2e+0	At1g71050	heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related	O.I.	C.G.	H.G.
29.2	99.7	4.9	Os03g0230000	AK105124.1	-	Hypothetical protein	1e+0	At2g03350	unknown protein	O.I.	C.G.	H.G.
28.6	99.6	2.5	Os04g0626500	AK069923.1	-	Disease resistance protein RGA2 (RGA2-blb) (Blightresistance protein RPI)	2e+0	At1g23145	RALFL2 (RALF-LIKE 2)	O.I.	C.G.	H.G.
28.3	99.6	51.9	Os04g0414500	AK121479.1	-	Hypothetical protein	1e+0	At4g14710	acireductone dioxygenase [iron(II)-requiring]/ metal ion binding	O.I.	C.G.	H.G.
26.8	99.6	1.5	Os02g0816000	9630.m05674	-	Anthranilate phosphoribosyltransferase-likeprotein	6e-3	At1g04150	C2 domain-containing protein	O.I.	C.G.	H.G.
24.9	99.5	9.9	Os02g0269200	AK066218.1	-	Dynein light chain, type 1 family protein	9e-2	Atmg01260	-	O.I.	C.G.	H.G.
24.4	99.4	3.1	Os07g0581700	AY559047.1	-	Homeodomain leucine zipper protein CPHB-4	9e-3	At5g66700	HB53	O.I.	C.G.	H.G.
23.7	99.4	1.8	Os05g0518200	AK107178.1	-	Conserved hypothetical protein	3e-2	At5g55130	CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5)	O.I.	C.G.	H.G.
22.8	99.3	16.7	Os07g0603300	AK066770.1	-	Conserved hypothetical protein	2e+0	At5g12410	THUMP domain-containing protein	O.I.	C.G.	H.G.
22.0	99.3	35.1	Os05g0361700	AK100184.1	-	Ethylene responsive element binding factor3(OsERF3)	2e-3	At1g04778	unknown protein	O.I.	C.G.	H.G.
21.9	99.3	6.3	Os06g0224200	AK067986.1	-	Glutaredoxin domain containing protein	9e-2	At4g08550	electron carrier/ protein disulfide oxidoreductase	O.I.	C.G.	H.G.
20.5	99.1	1.8	Os04g0664400	AB071292.1	-	Auxin response factor 1	5e-10	At1g19850	MP (MONOPTEROS)	O.I.	C.G.	H.G.
20.3	99.1	7.5	Os03g0823800	AK071234.1	-	Xanthine/uracil/vitamin C permease family protein	1e-15	At1g60030	xanthine/uracil permease family protein	O.I.	C.G.	H.G.
19.9	99.1	22.0	Os05g0223200	AK106308.1	-	Glycine-rich RNA-binding protein GRP2A	2e+0	At5g50820	anac097 (Arabidopsis NAC domain containing protein 97)	O.I.	C.G.	H.G.
19.7	99.1	8.9	Os10g0542400	AK068088.1	-	Expansin/Lol pI family protein	2e+0	At3g23230	ethylene-responsive factor, putative	O.I.	C.G.	H.G.
19.6	99.1	19.9	Os08g0156600	AK121377.1	-	Major facilitator superfamily protein	8e-8	At3g47420	glycerol-3-phosphate transporter, putative / glycerol 3-phosphate permease, putative	O.I.	C.G.	H.G.
19.6	99.1	1.9	Os09g0402300	AK063300.1	-	Phosphatidylinositol-4-phosphate 5-kinase familyprotein	5e-5	At1g71010	phosphatidylinositol-4-phosphate 5-kinase family protein	O.I.	C.G.	H.G.
19.5	99.1	0.7	Os09g0246500	AK109459.1	-	Conserved hypothetical protein	4e+0	At3g28530	UDP-glucose 4-epimerase	O.I.	C.G.	H.G.
19.4	99.0	70.5	Os06g0142200	AB018376.1	-	Early nodulin 93 ENOD93 protein family protein	1e-1	At5g12210	geranylgeranyl transferase type II beta subunit, putative / RAB geranylgeranyltransferase beta subunit, putative	O.I.	C.G.	H.G.
19.3	99.0	73.9	Os06g0142300	9634.m00419	-	Early nodulin 93 ENOD93 protein family protein	2e-2	At4g12860	UNE14 (unfertilized embryo sac 14)	O.I.	C.G.	H.G.

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GSM ID	GSM159190
Assay name	Young inflorescence (P1, upto 3 cm), biological rep 2
GSE experiment	GSE6893: Expression data for reproductive development in rice

Microarray experiments to specifically-expressed genes

GSM ID GSM159190 Assay name Young inflorescence (P1, upto 3 cm), biological rep 2 GSE experiment GSE6893: Expression data for reproductive development in rice

GSM ID GSM159190

Assay name Young inflorescence (P1, upto 3 cm), biological rep 2

GSE experiment GSE6893: Expression data for reproductive development in rice