CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM159183

Assay name Y Leaf, biological rep 1

GSE experiment GSE6893: Expression data for reproductive development in rice

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description Ev AGI code Arabidopsis gene name O.I. C.G. H.G. Other DB
149.8 100.0 66.3 Os03g0280400 AK063845.1 - Uncharacterized plant-specific domain 01589containing protein 6e-9 At3g55240 - O.I. C.G. H.G.
51.4 99.9 33.6 Os10g0180800 AK099018.1 - EGF-like calcium-binding domain containing protein 7e-6 At1g06700 serine/threonine protein kinase, putative O.I. C.G. H.G.
50.3 99.9 45.5 Os11g0256900 CB657230 - Hypothetical protein 3e+0 At3g52070 unknown protein O.I. C.G. H.G.
44.2 99.9 1.4 Os11g0152900 AK109321.1 - Hypothetical protein 1e-1 At1g71100 RSW10 (RADIAL SWELLING 10) O.I. C.G. H.G.
43.2 99.9 8.0 Os08g0495800 AK067229.1 - Raffinose synthase family protein 3e-26 At1g55740 AtSIP1 (Arabidopsis thaliana seed imbibition 1) O.I. C.G. H.G.
43.1 99.9 55.3 Os01g0389700 AK108444.1 - Protein of unknown function DUF679 family protein 2e+0 At4g35500 protein kinase family protein O.I. C.G. H.G.
37.0 99.8 2.8 Os11g0227700 CR282570 - RPR1 8e-2 At1g25440 zinc finger (B-box type) family protein O.I. C.G. H.G.
32.5 99.8 0.8 Os05g0253200 AK066537.1 - Protein kinase domain containing protein 3e-2 At1g56130 leucine-rich repeat family protein / protein kinase family protein O.I. C.G. H.G.
32.3 99.8 37.0 Os03g0183500 AK063042.1 - Protein of unknown function DUF581 family protein 2e+0 At2g36854 unknown protein O.I. C.G. H.G.
29.7 99.7 17.2 Os03g0826900 AK099709.1 - Conserved hypothetical protein 6e-1 At1g02820 late embryogenesis abundant 3 family protein / LEA3 family protein O.I. C.G. H.G.
29.1 99.7 14.5 Os12g0507000 AK065402.1 - Molybdopterin synthase (CNX2) 1e-33 At2g31955 CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2) O.I. C.G. H.G.
28.1 99.6 6.4 Os08g0109400 AK068232.1 - AUX/IAA protein family protein 4e-1 At3g23050 IAA7 (INDOLE-3-ACETIC ACID 7) O.I. C.G. H.G.
27.7 99.6 3.5 Os01g0899200 AK108736.1 - ERD3 protein 5e-3 At3g10200 dehydration-responsive protein-related O.I. C.G. H.G.
27.4 99.6 23.5 Os05g0555600 AK070485.1 - NADH dependent Glutamate Synthase precursor (EC1.4.1.14) 3e-38 At5g53460 GLT1 O.I. C.G. H.G.
26.6 99.5 112.3 Os12g0516000 CB966669 - Hypothetical protein 4e+0 At5g59240 40S ribosomal protein S8 (RPS8B) O.I. C.G. H.G.
26.2 99.5 15.6 Os06g0650900 AK071882.1 - Heat shock protein DnaJ family protein 7e-1 At2g39855 unknown protein O.I. C.G. H.G.
25.9 99.5 65.8 Os11g0607200 AK111536.1 - Protein kinase domain containing protein 8e-2 At5g65240 kinase O.I. C.G. H.G.
25.6 99.5 9.0 Os06g0255900 AK073580.1 - Exo70 exocyst complex subunit family protein 2e+0 At3g52800 zinc finger (AN1-like) family protein O.I. C.G. H.G.
24.8 99.5 2.1 Os01g0116500 9629.m00183 - Hypothetical protein 1e+0 At5g38060 unknown protein O.I. C.G. H.G.
24.5 99.4 4.3 Os08g0357300 AK100580.1 - Basic-leucine zipper (bZIP) transcription factordomain containing protein 8e-8 At1g75388 CPuORF5 (Conserved peptide upstream open reading frame 5) O.I. C.G. H.G.
22.4 99.3 11.9 Os04g0634700 AK100906.1 - Diacylglycerol kinase 5e-15 At2g20900 diacylglycerol kinase, putative O.I. C.G. H.G.
22.0 99.3 22.7 Os03g0309200 AB109892.1 - Phytochrome B 3e-15 At4g18130 PHYE (PHYTOCHROME DEFECTIVE E) O.I. C.G. H.G.
22.0 99.3 2.0 Os12g0611100 AK066826.1 - SRKb 2e-5 At1g16670 protein kinase family protein O.I. C.G. H.G.
21.7 99.2 1.2 Os10g0552400 AK121815.1 - U box domain containing protein 7e-1 At3g62340 WRKY68 O.I. C.G. H.G.
21.4 99.2 9.1 Os05g0453500 AK102175.1 - Conserved hypothetical protein 4e-1 At1g36340 UBC31 (ubiquitin-conjugating enzyme 31) O.I. C.G. H.G.
21.2 99.2 8.5 Os11g0673600 AY043283.1 - Disease resistance protein family protein 5e-1 At5g60840 unknown protein O.I. C.G. H.G.
21.0 99.2 2.4 Os03g0609800 AK065225.1 - NPH3 domain containing protein 3e-5 At4g37590 NPY5 (NAKED PINS IN YUC MUTANTS 5) O.I. C.G. H.G.
20.6 99.1 15.3 Os10g0142100 AK071673.1 - Zn-finger, RING domain containing protein 6e-1 At3g02290 zinc finger (C3HC4-type RING finger) family protein O.I. C.G. H.G.
20.6 99.1 14.7 Os02g0677300 AK106041.1 - CRT/DRE binding factor 1 4e-2 At1g15360 SHN1 (SHINE 1) O.I. C.G. H.G.
19.9 99.1 7.0 Os06g0563000 AK099669.1 - Ndr family protein 2e-22 At5g56750 Ndr family protein O.I. C.G. H.G.
19.8 99.1 63.1 Os02g0126400 AF194413.1 - Protein kinase CPK1 6e-30 At2g17890 CPK16 O.I. C.G. H.G.
19.5 99.1 21.7 Os01g0214200 AK061229.1 - Lipolytic enzyme, G-D-S-L family protein 5e-1 At4g01026 unknown protein O.I. C.G. H.G.
19.4 99.0 3.9 Os07g0518500 AK099924.1 - Cytochrome P450 family protein 9e-1 At5g15830 AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3) O.I. C.G. H.G.
19.3 99.0 1.7 Os11g0694100 CB619380 - Protein kinase domain containing protein 2e-2 At3g45920 receptor protein kinase-related O.I. C.G. H.G.
19.2 99.0 6.4 Os05g0183100 9633.m00809 - WRKY transcription factor 67 5e-7 At5g26170 WRKY50 O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	Ev	AGI code	Arabidopsis gene name	O.I.	C.G.	H.G.
149.8	100.0	66.3	Os03g0280400	AK063845.1	-	Uncharacterized plant-specific domain 01589containing protein	6e-9	At3g55240	-	O.I.	C.G.	H.G.
51.4	99.9	33.6	Os10g0180800	AK099018.1	-	EGF-like calcium-binding domain containing protein	7e-6	At1g06700	serine/threonine protein kinase, putative	O.I.	C.G.	H.G.
50.3	99.9	45.5	Os11g0256900	CB657230	-	Hypothetical protein	3e+0	At3g52070	unknown protein	O.I.	C.G.	H.G.
44.2	99.9	1.4	Os11g0152900	AK109321.1	-	Hypothetical protein	1e-1	At1g71100	RSW10 (RADIAL SWELLING 10)	O.I.	C.G.	H.G.
43.2	99.9	8.0	Os08g0495800	AK067229.1	-	Raffinose synthase family protein	3e-26	At1g55740	AtSIP1 (Arabidopsis thaliana seed imbibition 1)	O.I.	C.G.	H.G.
43.1	99.9	55.3	Os01g0389700	AK108444.1	-	Protein of unknown function DUF679 family protein	2e+0	At4g35500	protein kinase family protein	O.I.	C.G.	H.G.
37.0	99.8	2.8	Os11g0227700	CR282570	-	RPR1	8e-2	At1g25440	zinc finger (B-box type) family protein	O.I.	C.G.	H.G.
32.5	99.8	0.8	Os05g0253200	AK066537.1	-	Protein kinase domain containing protein	3e-2	At1g56130	leucine-rich repeat family protein / protein kinase family protein	O.I.	C.G.	H.G.
32.3	99.8	37.0	Os03g0183500	AK063042.1	-	Protein of unknown function DUF581 family protein	2e+0	At2g36854	unknown protein	O.I.	C.G.	H.G.
29.7	99.7	17.2	Os03g0826900	AK099709.1	-	Conserved hypothetical protein	6e-1	At1g02820	late embryogenesis abundant 3 family protein / LEA3 family protein	O.I.	C.G.	H.G.
29.1	99.7	14.5	Os12g0507000	AK065402.1	-	Molybdopterin synthase (CNX2)	1e-33	At2g31955	CNX2 (COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2)	O.I.	C.G.	H.G.
28.1	99.6	6.4	Os08g0109400	AK068232.1	-	AUX/IAA protein family protein	4e-1	At3g23050	IAA7 (INDOLE-3-ACETIC ACID 7)	O.I.	C.G.	H.G.
27.7	99.6	3.5	Os01g0899200	AK108736.1	-	ERD3 protein	5e-3	At3g10200	dehydration-responsive protein-related	O.I.	C.G.	H.G.
27.4	99.6	23.5	Os05g0555600	AK070485.1	-	NADH dependent Glutamate Synthase precursor (EC1.4.1.14)	3e-38	At5g53460	GLT1	O.I.	C.G.	H.G.
26.6	99.5	112.3	Os12g0516000	CB966669	-	Hypothetical protein	4e+0	At5g59240	40S ribosomal protein S8 (RPS8B)	O.I.	C.G.	H.G.
26.2	99.5	15.6	Os06g0650900	AK071882.1	-	Heat shock protein DnaJ family protein	7e-1	At2g39855	unknown protein	O.I.	C.G.	H.G.
25.9	99.5	65.8	Os11g0607200	AK111536.1	-	Protein kinase domain containing protein	8e-2	At5g65240	kinase	O.I.	C.G.	H.G.
25.6	99.5	9.0	Os06g0255900	AK073580.1	-	Exo70 exocyst complex subunit family protein	2e+0	At3g52800	zinc finger (AN1-like) family protein	O.I.	C.G.	H.G.
24.8	99.5	2.1	Os01g0116500	9629.m00183	-	Hypothetical protein	1e+0	At5g38060	unknown protein	O.I.	C.G.	H.G.
24.5	99.4	4.3	Os08g0357300	AK100580.1	-	Basic-leucine zipper (bZIP) transcription factordomain containing protein	8e-8	At1g75388	CPuORF5 (Conserved peptide upstream open reading frame 5)	O.I.	C.G.	H.G.
22.4	99.3	11.9	Os04g0634700	AK100906.1	-	Diacylglycerol kinase	5e-15	At2g20900	diacylglycerol kinase, putative	O.I.	C.G.	H.G.
22.0	99.3	22.7	Os03g0309200	AB109892.1	-	Phytochrome B	3e-15	At4g18130	PHYE (PHYTOCHROME DEFECTIVE E)	O.I.	C.G.	H.G.
22.0	99.3	2.0	Os12g0611100	AK066826.1	-	SRKb	2e-5	At1g16670	protein kinase family protein	O.I.	C.G.	H.G.
21.7	99.2	1.2	Os10g0552400	AK121815.1	-	U box domain containing protein	7e-1	At3g62340	WRKY68	O.I.	C.G.	H.G.
21.4	99.2	9.1	Os05g0453500	AK102175.1	-	Conserved hypothetical protein	4e-1	At1g36340	UBC31 (ubiquitin-conjugating enzyme 31)	O.I.	C.G.	H.G.
21.2	99.2	8.5	Os11g0673600	AY043283.1	-	Disease resistance protein family protein	5e-1	At5g60840	unknown protein	O.I.	C.G.	H.G.
21.0	99.2	2.4	Os03g0609800	AK065225.1	-	NPH3 domain containing protein	3e-5	At4g37590	NPY5 (NAKED PINS IN YUC MUTANTS 5)	O.I.	C.G.	H.G.
20.6	99.1	15.3	Os10g0142100	AK071673.1	-	Zn-finger, RING domain containing protein	6e-1	At3g02290	zinc finger (C3HC4-type RING finger) family protein	O.I.	C.G.	H.G.
20.6	99.1	14.7	Os02g0677300	AK106041.1	-	CRT/DRE binding factor 1	4e-2	At1g15360	SHN1 (SHINE 1)	O.I.	C.G.	H.G.
19.9	99.1	7.0	Os06g0563000	AK099669.1	-	Ndr family protein	2e-22	At5g56750	Ndr family protein	O.I.	C.G.	H.G.
19.8	99.1	63.1	Os02g0126400	AF194413.1	-	Protein kinase CPK1	6e-30	At2g17890	CPK16	O.I.	C.G.	H.G.
19.5	99.1	21.7	Os01g0214200	AK061229.1	-	Lipolytic enzyme, G-D-S-L family protein	5e-1	At4g01026	unknown protein	O.I.	C.G.	H.G.
19.4	99.0	3.9	Os07g0518500	AK099924.1	-	Cytochrome P450 family protein	9e-1	At5g15830	AtbZIP3 (Arabidopsis thaliana basic leucine-zipper 3)	O.I.	C.G.	H.G.
19.3	99.0	1.7	Os11g0694100	CB619380	-	Protein kinase domain containing protein	2e-2	At3g45920	receptor protein kinase-related	O.I.	C.G.	H.G.
19.2	99.0	6.4	Os05g0183100	9633.m00809	-	WRKY transcription factor 67	5e-7	At5g26170	WRKY50	O.I.	C.G.	H.G.

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GSM ID	GSM159183
Assay name	Y Leaf, biological rep 1
GSE experiment	GSE6893: Expression data for reproductive development in rice

Microarray experiments to specifically-expressed genes

GSM ID GSM159183 Assay name Y Leaf, biological rep 1 GSE experiment GSE6893: Expression data for reproductive development in rice

GSM ID GSM159183

Assay name Y Leaf, biological rep 1

GSE experiment GSE6893: Expression data for reproductive development in rice