Microarray experiments to specifically-expressed genes

GSM ID GSM159179
Assay name Root, 7-day-old Seedling, biological rep 3
GSE experiment GSE6893: Expression data for reproductive development in rice

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
53.699.95.5Os05g01348009633.m00371-Haem peroxidase, plant/fungal/bacterial familyprotein1e-2At3g01190peroxidase 27 (PER27) (P27) (PRXR7)O.I.C.G.H.G.
51.599.91.5Os11g02741009639.m01594-Protein kinase domain containing protein3e-1At3g60580zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
49.599.92.4Os05g0246300AK101313.1-Major pollen allergen Lol pI family protein1e+1At5g61490-O.I.C.G.H.G.
48.999.92.4Os04g0674800AK119913.1-Cellulase (Fragment)1e+0At1g02800ATCEL2O.I.C.G.H.G.
41.799.955.8Os11g0691100AF353091.2-Protein kinase domain containing protein4e-3At3g25490wall-associated kinase, putativeO.I.C.G.H.G.
38.999.86.0Os01g02943009629.m01849--2e+0At4g36430peroxidase, putativeO.I.C.G.H.G.
37.999.81.1Os01g0126900AK109876.1-contains InterPro domain(s): IPR001117, IPR0089722e-1At1g23010LPR1 (Low Phosphate Root1)O.I.C.G.H.G.
37.899.80.6Os09g02954009637.m00961--1e+0At4g16610zinc finger (C2H2 type) family proteinO.I.C.G.H.G.
34.799.831.5Os01g0216000AK058429.1-Lipolytic enzyme, G-D-S-L family protein8e-4At4g09840unknown proteinO.I.C.G.H.G.
33.799.85.4Os12g0260500AU184051-Short-chain dehydrogenase/reductase SDR familyprotein2e+0At5g56860GNC (GATA, nitrate-inducible, carbon metabolism-involved)O.I.C.G.H.G.
30.899.71.5Os01g0968300AK122054.1-Root cap family protein2e-1At3g19430late embryogenesis abundant protein-related / LEA protein-relatedO.I.C.G.H.G.
29.999.76.3Os05g0280500AK111471.1-Phospholipid/glycerol acyltransferase familyprotein2e-8At2g38110GPAT6 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 6)O.I.C.G.H.G.
29.199.78.1Os11g01797009639.m00715-Plant disease resistance response protein familyprotein2e-2At1g22900-O.I.C.G.H.G.
28.199.60.1Os07g06386009635.m04465-Peroxidase 16e-10At5g40150peroxidase, putativeO.I.C.G.H.G.
23.899.46.7Os01g0827300AK071929.1-Laccase precursor (EC 1.10.3.2)7e-5At2g30210LAC3 (laccase 3)O.I.C.G.H.G.
22.699.389.3Os01g0172800CA765179--1e+0At1g28395unknown proteinO.I.C.G.H.G.
22.599.39.4Os11g0138900AK059449.1-Esterase/lipase/thioesterase domain containingprotein2e-1At2g05510glycine-rich proteinO.I.C.G.H.G.
22.499.31.9Os01g0810800AU032052-Receptor protein kinase-like protein8e-2At2g19190FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1)O.I.C.G.H.G.
21.599.20.6Os06g0611300AK107800.1-Conserved hypothetical protein8e-2At5g28630glycine-rich proteinO.I.C.G.H.G.
21.499.28.1Os01g0704100AK109776.1--2e-5At1g12940ATNRT2.5 (nitrate transporter2.5)O.I.C.G.H.G.
21.199.20.3Os10g0415100AK119782.1-Amino acid/polyamine transporter II family protein2e-1At5g65300unknown proteinO.I.C.G.H.G.
20.499.15.6Os06g0521500AK072761.1-Haem peroxidase, plant/fungal/bacterial familyprotein7e-4At3g50990electron carrier/ heme binding / peroxidaseO.I.C.G.H.G.
20.299.10.8Os04g0594100AK111960.1-MYB83e-16At4g38620MYB4O.I.C.G.H.G.
20.299.10.1Os04g0552200AF261273.1-Beta-expansin 52e+0At5g48660-O.I.C.G.H.G.
20.199.16.0Os02g0706900AK059034.1-Alpha/beta hydrolase family protein1e-2At4g36610hydrolase, alpha/beta fold family proteinO.I.C.G.H.G.
19.899.11.1Os03g0281900AK072135.1-ABC transporter related domain containing protein3e-1At3g53510ABC transporter family proteinO.I.C.G.H.G.
19.799.18.7Os02g0765600NM_193986.1-Alpha-amylase precursor (EC 3.2.1.1)(1,4-alpha-D-glucan glucanohydrolase) (Isozyme 1B)1e+1At4g15790unknown proteinO.I.C.G.H.G.
19.399.00.6Os02g07870009630.m05412-Allergen V5/Tpx-1 related family protein3e-1At1g50740unknown proteinO.I.C.G.H.G.
19.099.00.9Os04g0545700AU033092-Conserved hypothetical protein4e-1At5g50510-O.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage