Microarray experiments to specifically-expressed genes

GSM ID GSM159173
Assay name Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10)
GSE experiment GSE6908: Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
153.5100.033.4Os05g01533009633.m00532-Lipase, class 3 family protein3e+0At2g20740-O.I.C.G.H.G.
137.6100.00.4Os05g01043009633.m00044-Leucine-rich repeat, plant specific containingprotein2e+0At5g50010transcription factor/ transcription regulatorO.I.C.G.H.G.
124.7100.0156.9Os03g0836800AK061197.1-Peptidase M20 family protein9e+0At5g38900DSBA oxidoreductase family proteinO.I.C.G.H.G.
119.0100.0172.4Os12g0548700AK058739.1-CI2C1e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.C.G.H.G.
106.6100.033.7Os11g0490600AK067664.1-Hypothetical protein8e-1At3g20680unknown proteinO.I.C.G.H.G.
104.5100.0186.5Os06g0705400AK062667.1-Nonspecific lipid-transfer protein 2P (LTP2P)(Lipid transfer protein 2 isoform 2) (LTP2-2) (7 kDalipid transfer protein 2)5e+0At4g13480AtMYB79 (myb domain protein 79)O.I.C.G.H.G.
102.8100.05.9Os10g0513900AK105773.1-E-class P450, group I family protein2e-8At1g64900CYP89A2 (CYTOCHROME P450 89A2)O.I.C.G.H.G.
100.5100.02.6Os07g0475700AK060076.1-Auxin responsive SAUR protein family protein5e-1At4g39260GR-RBP8O.I.C.G.H.G.
95.0100.0159.7Os01g0348800AK062553.1-Salt-stress induced protein (Salt protein)1e+0At5g58570unknown proteinO.I.C.G.H.G.
91.0100.013.1Os03g0162800AK064127.1-Beta-ketoacyl-CoA-synthase3e-3At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)O.I.C.G.H.G.
90.4100.02.2Os11g0450300AK059900.1-Hypothetical protein1e-1At5g40070-O.I.C.G.H.G.
86.3100.03.4Os12g0267200AK069115.1-Cyclopropane-fatty-acyl-phospholipid synthasefamily protein6e-9At3g23510cyclopropane fatty acid synthase, putative / CPA-FA synthase, putativeO.I.C.G.H.G.
84.9100.062.7Os06g0215900AK105590.1-Oxo-phytodienoic acid reductase4e-2At1g0940012-oxophytodienoate reductase, putativeO.I.C.G.H.G.
84.1100.010.6Os10g0322200AK106038.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein6e-2At1g22400UGT85A1O.I.C.G.H.G.
77.699.91.9Os07g0643700AK109637.1-Esterase/lipase/thioesterase domain containingprotein3e+0At4g21620glycine-rich proteinO.I.C.G.H.G.
76.299.96.1Os02g0303500AK059847.1-Eggshell protein family protein2e-3At5g46730glycine-rich proteinO.I.C.G.H.G.
76.199.941.4Os11g0149400AK063900.1-Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]1e-1At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.C.G.H.G.
75.199.93.2Os03g0849900AK105978.1-Conserved hypothetical protein3e+0At5g16160unknown proteinO.I.C.G.H.G.
65.499.91.3Os06g0514100AU222844-Thionin Osthi12e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingO.I.C.G.H.G.
65.199.919.7Os02g0106100AK072245.1-Fructosyltransferase3e-4At1g62660beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolarO.I.C.G.H.G.
64.299.93.6Os12g0191500AK061040.1-Peroxidase 43 precursor (EC 1.11.1.7) (AtperoxP43)2e+0At1g30870cationic peroxidase, putativeO.I.C.G.H.G.
62.999.926.9Os06g0655200AK121090.1-Pollen allergen Lol p2 family protein5e+0At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.C.G.H.G.
62.899.97.9Os03g0314500AK065474.1-Quinonprotein alcohol dehydrogenase-like domaincontaining protein1e+0At1g13860dehydration-responsive protein-relatedO.I.C.G.H.G.
62.599.91.9Os11g0213000CF330511-Protein kinase domain containing protein6e+0At5g45760transducin family protein / WD-40 repeat family proteinO.I.C.G.H.G.
61.899.9160.7Os08g0189300AF032971.1-Oxalate oxidase (Fragment)3e-2At5g26700germin-like protein, putativeO.I.C.G.H.G.
59.599.978.2Os07g0539100AK067173.1-Glycoside hydrolase, family 17 protein2e-2At2g42930glycosyl hydrolase family protein 17O.I.C.G.H.G.
57.799.90.7Os01g0211200NM_188398.1-Cytochrome P450 family protein1e-5At2g34500CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)O.I.C.G.H.G.
57.299.914.8Os03g0738600AK073529.1-Lipoxygenase L-2 (EC 1.13.11.12)2e+0At1g55020LOX1O.I.C.G.H.G.
54.199.98.3Os11g0432600AK059916.1-Beta-ketoacyl reductase GL8B3e+0At4g31580SRZ-22O.I.C.G.H.G.
53.199.94.5Os04g0180400AK071546.1-Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)6e-5At5g47990CYP705A5O.I.C.G.H.G.
52.899.961.7Os01g0823100U30477.1-Alpha-expansin OsEXPA25e-5At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)O.I.C.G.H.G.
52.499.94.6Os08g0124000AK067378.1-Resistance protein candidate (Fragment)8e-2At4g39040RNA bindingO.I.C.G.H.G.
51.699.98.6Os08g0550200AK070238.1-Multi antimicrobial extrusion protein MatE familyprotein4e-3At1g23300MATE efflux family proteinO.I.C.G.H.G.
51.199.93.9Os07g0281800AK105707.1-Aldehyde oxidase-21e-3At1g04580AAO4 (ARABIDOPSIS ALDEHYDE OXIDASE 4)O.I.C.G.H.G.
50.499.91.8Os10g04397009638.m02608-Cytochrome P450 family protein8e-4At3g53280CYP71B5 (CYTOCHROME P450 71B5)O.I.C.G.H.G.
46.199.951.2Os04g0228400Y07782.1-Expansin S24e-14At1g20190ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)O.I.C.G.H.G.
46.199.94.5Os09g0433000AK063243.1-Conserved hypothetical protein4e+0At2g42360zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
45.599.916.8Os07g0264100AK065209.1-D-isomer specific 2-hydroxyacid dehydrogenase,NAD-binding domain containing protein1e+1At5g44572unknown proteinO.I.C.G.H.G.
45.499.90.8Os01g0594300AK105670.1-Extensin-like protein4e+0At4g13340leucine-rich repeat family protein / extensin family proteinO.I.C.G.H.G.
43.599.92.5Os01g0609300AF093586-PDR-like ABC transporter (PDR3 ABC transporter)6e-1At3g18590plastocyanin-like domain-containing proteinO.I.C.G.H.G.
43.499.981.3Os11g0427800AK061288.1-Plant lipid transfer protein/Par allergen familyprotein2e+0At5g53600glycosyl hydrolase family protein 17O.I.C.G.H.G.
42.199.963.3Os02g0587000AK062460.1-Glycine-rich protein6e+0At1g30515unknown proteinO.I.C.G.H.G.
42.199.90.1Os10g03929009638.m02143-Lipolytic enzyme, G-D-S-L family protein1e-2At1g28610GDSL-motif lipase, putativeO.I.C.G.H.G.
41.999.93.8Os03g0859100AK060992.1-Lipolytic enzyme, G-D-S-L family protein2e-1At5g40630ubiquitin family proteinO.I.C.G.H.G.
41.599.97.7Os11g05918009639.m03440-Wound-induced protein WIN2 precursor4e-9At3g04720PR4 (PATHOGENESIS-RELATED 4)O.I.C.G.H.G.
39.899.91.8Os08g0173600AK062724.1-Hypothetical protein2e-2At3g52510-O.I.C.G.H.G.
39.799.910.1Os12g0170800AK059809.1-24 kDa protein SC24 (24 kDa seed coat protein)5e-1At3g50670U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)O.I.C.G.H.G.
39.699.9155.2Os11g0211800AK059202.1-Hypothetical protein4e-1At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
38.899.822.4Os06g0215600AU222916-Oxo-phytodienoic acid reductase(12-oxophytodienoic acid reductase)6e-4At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.C.G.H.G.
38.899.82.8Os08g0395700AK069626.1-Conserved hypothetical protein3e+0At3g58070GIS (GLABROUS INFLORESCENCE STEMS)O.I.C.G.H.G.
38.499.87.7Os01g0957600AK059235.1-Elicitor-inducible cytochrome P4503e+0At3g53280CYP71B5 (CYTOCHROME P450 71B5)O.I.C.G.H.G.
38.399.836.2Os03g0633800AK073044.1-IAA6 (Fragment)2e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)O.I.C.G.H.G.
38.299.80.6Os03g08058009631.m05818-Rieske [2Fe-2S] region domain containing protein9e-4At4g25650ACD1-LIKE (ACD1-LIKE)O.I.C.G.H.G.
38.199.861.0Os03g0341600AK067497.1-Hypothetical protein2e+0At4g36660unknown proteinO.I.C.G.H.G.
38.099.812.6Os03g0212800AY129294.1-Beta-glucosidase5e-12At1g26560BGLU40 (BETA GLUCOSIDASE 40)O.I.C.G.H.G.
37.099.89.3Os08g0544400AK107688.1-ABC transporter related domain containing protein2e-10At2g29940PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)O.I.C.G.H.G.
36.999.89.3Os01g0825800AK064301.1-Amino acid/polyamine transporter II family protein9e-1At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.C.G.H.G.
36.999.84.1Os01g0882000AK108653.1-Conserved hypothetical protein8e-1At1g11890SEC22O.I.C.G.H.G.
36.299.80.4Os09g0485600AK063705.1-The start codon is not identified.5e-3At1g08290zinc finger (C2H2 type) protein (WIP3)O.I.C.G.H.G.
36.199.81.1Os09g0360500AK105487.1-Conserved hypothetical protein1e-2At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)O.I.C.G.H.G.
36.099.894.0Os05g0217800CB967484-BURP domain containing protein2e+0At4g00430PIP1O.I.C.G.H.G.
35.699.835.2Os10g0370500AK065000.1-Glycoside hydrolase, family 5 protein2e-2At5g37550unknown proteinO.I.C.G.H.G.
35.399.820.1Os05g0402900AK070554.1-EDGP3e+0At3g61470LHCA2O.I.C.G.H.G.
35.099.82.2Os08g0112300AK070381.1-Transferase family protein8e-1At3g03920Gar1 RNA-binding region family proteinO.I.C.G.H.G.
34.299.816.0Os02g0646200AK071507.1-Zn-finger, B-box domain containing protein4e-2At2g43140DNA binding / transcription factorO.I.C.G.H.G.
34.299.82.0Os10g05132009638.m03293-NOD26-like membrane integral protein ZmNIP3-12e-5At4g10380NIP5O.I.C.G.H.G.
33.499.87.3Os03g0302800AK061293.1-Conserved hypothetical protein4e-5At5g38700unknown proteinO.I.C.G.H.G.
33.099.895.8Os09g0451400AK058296.1-1-aminocyclopropapne-1-carboxylic acid oxidase4e-12At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeO.I.C.G.H.G.
32.899.81.0Os02g0484200AK103832.1-Transferase family protein1e+1At5g18180Gar1 RNA-binding region family proteinO.I.C.G.H.G.
32.299.79.1Os01g0130400AK063966.1-Alpha-xylosidase precursor (F24J5.20 protein)(At1g68560/F24J5_10)3e-2At1g68560XYL1 (ALPHA-XYLOSIDASE 1)O.I.C.G.H.G.
31.899.7138.3Os10g0555600AF261274.1-Beta-expansin precursor4e-2At3g06080unknown proteinO.I.C.G.H.G.
31.299.74.1Os11g01692009639.m00617-Amino acid/polyamine transporter II family protein5e-14At2g21050amino acid permease, putativeO.I.C.G.H.G.
31.199.72.1Os02g0567800AK105793.1-Esterase/lipase/thioesterase domain containingprotein2e+0At5g16286unknown proteinO.I.C.G.H.G.
30.799.7190.1Os08g0189200AF032972.1-Oxalate oxidase (Fragment)3e-2At5g39110germin-like protein, putativeO.I.C.G.H.G.
30.499.728.9Os01g0270300AK101508.1-Cationic peroxidase isozyme 40K precursor2e-1At2g38390peroxidase, putativeO.I.C.G.H.G.
30.399.778.7Os05g0209600AY580163.1-Lipolytic enzyme, G-D-S-L family protein2e-1At5g03980GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
30.199.75.9Os01g0119000AK105948.1-Protein of unknown function DUF563 family protein2e-5At3g18170transferase, transferring glycosyl groupsO.I.C.G.H.G.
29.999.728.7Os09g0491100AY056828.1-Beta-primeverosidase (EC 3.2.1.149)9e-1At3g60120BGLU27 (BETA GLUCOSIDASE 27)O.I.C.G.H.G.
29.999.710.2Os06g0701700AB061313.1-HKT-type transporter (Sodium ion transporter)9e-1At4g04020FIB (FIBRILLIN)O.I.C.G.H.G.
29.999.70.5Os04g0565200AK111866.1-Cis-zeatin O-glucosyltransferase6e-2At2g43840UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.C.G.H.G.
29.899.70.0Os05g03900009633.m02964-Lipase, class 3 family protein8e-7At1g51440lipase class 3 family proteinO.I.C.G.H.G.
28.999.61.2Os06g0232300AK103208.1-Auxin transport protein REH11e-25At1g70940PIN3 (PIN-FORMED 3)O.I.C.G.H.G.
28.999.60.5Os01g0772500AK109736.1-Glycosyl transferase, family 14 protein3e+0At5g60840unknown proteinO.I.C.G.H.G.
28.799.689.6Os02g0230300AK058752.1-En/Spm-like transposon protein (Protodermal factor1)3e+0At3g60010ASK13 (ARABIDOPSIS SKP1-LIKE 13)O.I.C.G.H.G.
28.699.654.3Os01g0799500AU066087-Methyladenine glycosylase family protein1e-8At3g12710methyladenine glycosylase family proteinO.I.C.G.H.G.
28.599.60.9Os01g0832100AK064727.1-Lipolytic enzyme, G-D-S-L family protein3e+0At1g08780AIP3 (ABI3-INTERACTING PROTEIN 3)O.I.C.G.H.G.
28.399.618.8Os06g0302000AK106070.1-Hypothetical protein3e+0At1g06475unknown proteinO.I.C.G.H.G.
27.899.60.5Os10g0171500AK058441.1-E-class P450, group I family protein8e-1At4g16240unknown proteinO.I.C.G.H.G.
27.799.61.1Os07g04808009635.m02900-Cellulase (EC 3.2.1.4)5e-4At3g44990XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8)O.I.C.G.H.G.
27.599.67.8Os04g0175900AK061551.1-0-methyltransferase (EC 2.1.1.6) (Fragment)1e-2At1g33030O-methyltransferase family 2 proteinO.I.C.G.H.G.
27.599.63.0Os01g0627900AB038597.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)9e-4At1g17060CYP72C1 (CYTOCHROME P450 72C1)O.I.C.G.H.G.
27.499.686.2Os10g0551800L27209.1-Root-specific protein (RCc2 protein)2e+0At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.C.G.H.G.
27.499.61.5Os03g0348900AK059950.1-CHY zinc finger domain containing protein3e-2At3g62970protein binding / zinc ion bindingO.I.C.G.H.G.
27.099.64.8Os06g0639800AK060486.1-Cytochrome P450 family protein6e-2At3g07565DNA bindingO.I.C.G.H.G.
26.799.61.4Os03g0322200AK062978.1-Hypothetical protein5e+0At3g56500serine-rich protein-relatedO.I.C.G.H.G.
26.299.515.9Os07g0106700AK100221.1-Hypothetical protein5e-1At1g79700ovule development protein, putativeO.I.C.G.H.G.
26.199.51.8Os12g0610600AK071464.1-NAM / CUC2-like protein3e-6At1g56010NAC1O.I.C.G.H.G.
25.799.5141.4Os11g0289700AK065302.1-E-class P450, group I family protein4e+0At5g56075ATP binding / nucleotide binding / phenylalanine-tRNA ligaseO.I.C.G.H.G.
25.799.53.7Os06g0675600AK063648.1-GRAB2 protein3e-3At1g56010NAC1O.I.C.G.H.G.
25.599.5161.1Os07g0568700AF466357.1-Floral organ regulator 1 (Floral organ regulator2)3e+0At4g27610unknown proteinO.I.C.G.H.G.



Back to the CoP portal site

Back to the KAGIANA project homepage