Microarray experiments to specifically-expressed genes

GSM ID GSM159172
Assay name Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9)
GSE experiment GSE6908: Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional descriptionEvAGI codeArabidopsis gene name O.I. C.G. H.G. Other DB
250.7100.054.6Os05g01533009633.m00532-Lipase, class 3 family protein3e+0At2g20740-O.I.C.G.H.G.
207.0100.0348.2Os01g0348800AK062553.1-Salt-stress induced protein (Salt protein)1e+0At5g58570unknown proteinO.I.C.G.H.G.
200.5100.0252.2Os03g0836800AK061197.1-Peptidase M20 family protein9e+0At5g38900DSBA oxidoreductase family proteinO.I.C.G.H.G.
200.4100.0357.7Os06g0705400AK062667.1-Nonspecific lipid-transfer protein 2P (LTP2P)(Lipid transfer protein 2 isoform 2) (LTP2-2) (7 kDalipid transfer protein 2)5e+0At4g13480AtMYB79 (myb domain protein 79)O.I.C.G.H.G.
179.2100.0259.5Os12g0548700AK058739.1-CI2C1e+0At4g14805protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.C.G.H.G.
159.1100.023.0Os03g0162800AK064127.1-Beta-ketoacyl-CoA-synthase3e-3At5g43760KCS20 (3-KETOACYL-COA SYNTHASE 20)O.I.C.G.H.G.
124.7100.039.4Os11g0490600AK067664.1-Hypothetical protein8e-1At3g20680unknown proteinO.I.C.G.H.G.
109.8100.028.4Os03g0738600AK073529.1-Lipoxygenase L-2 (EC 1.13.11.12)2e+0At1g55020LOX1O.I.C.G.H.G.
97.1100.00.3Os05g01043009633.m00044-Leucine-rich repeat, plant specific containingprotein2e+0At5g50010transcription factor/ transcription regulatorO.I.C.G.H.G.
90.6100.049.3Os11g0149400AK063900.1-Phytosulfokine-beta (PSK-beta) (Phytosulfokine-b)]1e-1At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.C.G.H.G.
89.2100.099.0Os04g0228400Y07782.1-Expansin S24e-14At1g20190ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)O.I.C.G.H.G.
81.699.92.9Os10g04397009638.m02608-Cytochrome P450 family protein8e-4At3g53280CYP71B5 (CYTOCHROME P450 71B5)O.I.C.G.H.G.
79.099.924.0Os02g0106100AK072245.1-Fructosyltransferase3e-4At1g62660beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolarO.I.C.G.H.G.
78.599.9118.0Os02g0587000AK062460.1-Glycine-rich protein6e+0At1g30515unknown proteinO.I.C.G.H.G.
76.499.989.2Os01g0823100U30477.1-Alpha-expansin OsEXPA25e-5At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)O.I.C.G.H.G.
75.699.94.4Os10g0513900AK105773.1-E-class P450, group I family protein2e-8At1g64900CYP89A2 (CYTOCHROME P450 89A2)O.I.C.G.H.G.
75.099.9294.0Os11g0211800AK059202.1-Hypothetical protein4e-1At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.C.G.H.G.
69.999.93.0Os03g0849900AK105978.1-Conserved hypothetical protein3e+0At5g16160unknown proteinO.I.C.G.H.G.
65.699.93.6Os12g0191500AK061040.1-Peroxidase 43 precursor (EC 1.11.1.7) (AtperoxP43)2e+0At1g30870cationic peroxidase, putativeO.I.C.G.H.G.
62.999.90.1Os10g03929009638.m02143-Lipolytic enzyme, G-D-S-L family protein1e-2At1g28610GDSL-motif lipase, putativeO.I.C.G.H.G.
62.699.90.9Os03g08058009631.m05818-Rieske [2Fe-2S] region domain containing protein9e-4At4g25650ACD1-LIKE (ACD1-LIKE)O.I.C.G.H.G.
61.399.9114.8Os11g0427800AK061288.1-Plant lipid transfer protein/Par allergen familyprotein2e+0At5g53600glycosyl hydrolase family protein 17O.I.C.G.H.G.
59.999.9174.0Os09g0451400AK058296.1-1-aminocyclopropapne-1-carboxylic acid oxidase4e-12At1g120101-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putativeO.I.C.G.H.G.
59.199.95.4Os03g0859100AK060992.1-Lipolytic enzyme, G-D-S-L family protein2e-1At5g40630ubiquitin family proteinO.I.C.G.H.G.
58.499.9152.2Os05g0217800CB967484-BURP domain containing protein2e+0At4g00430PIP1O.I.C.G.H.G.
57.699.9150.0Os08g0189300AF032971.1-Oxalate oxidase (Fragment)3e-2At5g26700germin-like protein, putativeO.I.C.G.H.G.
56.099.91.7Os11g0213000CF330511-Protein kinase domain containing protein6e+0At5g45760transducin family protein / WD-40 repeat family proteinO.I.C.G.H.G.
55.599.91.1Os06g0514100AU222844-Thionin Osthi12e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingO.I.C.G.H.G.
54.399.932.4Os02g0205200AK106819.1-Protein of unknown function DUF642 family protein5e-2At2g15930unknown proteinO.I.C.G.H.G.
52.999.90.6Os01g0211200NM_188398.1-Cytochrome P450 family protein1e-5At2g34500CYP710A1 (cytochrome P450, family 710, subfamily A, polypeptide 1)O.I.C.G.H.G.
52.199.92.3Os02g0511600AK111241.1-Conserved hypothetical protein6e+0At1g76930ATEXT4 (EXTENSIN 4)O.I.C.G.H.G.
51.799.92.0Os07g04808009635.m02900-Cellulase (EC 3.2.1.4)5e-4At3g44990XTR8 (XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8)O.I.C.G.H.G.
51.399.937.9Os06g0215900AK105590.1-Oxo-phytodienoic acid reductase4e-2At1g0940012-oxophytodienoate reductase, putativeO.I.C.G.H.G.
50.399.916.6Os03g0212800AY129294.1-Beta-glucosidase5e-12At1g26560BGLU40 (BETA GLUCOSIDASE 40)O.I.C.G.H.G.
48.899.918.0Os07g0264100AK065209.1-D-isomer specific 2-hydroxyacid dehydrogenase,NAD-binding domain containing protein1e+1At5g44572unknown proteinO.I.C.G.H.G.
47.899.96.0Os10g0322200AK106038.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein6e-2At1g22400UGT85A1O.I.C.G.H.G.
45.199.91.1Os07g0643700AK109637.1-Esterase/lipase/thioesterase domain containingprotein3e+0At4g21620glycine-rich proteinO.I.C.G.H.G.
45.099.9195.6Os10g0555600AF261274.1-Beta-expansin precursor4e-2At3g06080unknown proteinO.I.C.G.H.G.
44.099.90.2Os11g0539000AK071015.1-Hypothetical protein4e+0At3g02555unknown proteinO.I.C.G.H.G.
43.699.957.3Os07g0539100AK067173.1-Glycoside hydrolase, family 17 protein2e-2At2g42930glycosyl hydrolase family protein 17O.I.C.G.H.G.
42.899.9270.7Os07g0568700AF466357.1-Floral organ regulator 1 (Floral organ regulator2)3e+0At4g27610unknown proteinO.I.C.G.H.G.
41.699.91.8Os06g0653200AK058439.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein2e+0At3g53470unknown proteinO.I.C.G.H.G.
40.899.96.3Os11g0432600AK059916.1-Beta-ketoacyl reductase GL8B3e+0At4g31580SRZ-22O.I.C.G.H.G.
40.799.939.0Os09g0491100AY056828.1-Beta-primeverosidase (EC 3.2.1.149)9e-1At3g60120BGLU27 (BETA GLUCOSIDASE 27)O.I.C.G.H.G.
40.399.9125.8Os02g0230300AK058752.1-En/Spm-like transposon protein (Protodermal factor1)3e+0At3g60010ASK13 (ARABIDOPSIS SKP1-LIKE 13)O.I.C.G.H.G.
40.399.91.2Os01g0832100AK064727.1-Lipolytic enzyme, G-D-S-L family protein3e+0At1g08780AIP3 (ABI3-INTERACTING PROTEIN 3)O.I.C.G.H.G.
38.999.836.8Os03g0633800AK073044.1-IAA6 (Fragment)2e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)O.I.C.G.H.G.
38.199.864.6Os11g0102200AB018444.1-NPH1-12e-28At3g45780PHOT1 (PHOTOTROPIN 1)O.I.C.G.H.G.
38.099.81.5Os12g0267200AK069115.1-Cyclopropane-fatty-acyl-phospholipid synthasefamily protein6e-9At3g23510cyclopropane fatty acid synthase, putative / CPA-FA synthase, putativeO.I.C.G.H.G.
36.299.821.9Os07g0106700AK100221.1-Hypothetical protein5e-1At1g79700ovule development protein, putativeO.I.C.G.H.G.
36.299.80.9Os11g0450300AK059900.1-Hypothetical protein1e-1At5g40070-O.I.C.G.H.G.
35.899.8112.5Os10g0551800L27209.1-Root-specific protein (RCc2 protein)2e+0At5g17870PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)O.I.C.G.H.G.
35.499.8219.3Os08g0189200AF032972.1-Oxalate oxidase (Fragment)3e-2At5g39110germin-like protein, putativeO.I.C.G.H.G.
35.299.80.6Os03g03133009631.m01974-Poly(A) polymerase, central region domaincontaining protein2e-1At5g65080MAF5 (MADS AFFECTING FLOWERING 5)O.I.C.G.H.G.
34.899.833.1Os01g0270300AK101508.1-Cationic peroxidase isozyme 40K precursor2e-1At2g38390peroxidase, putativeO.I.C.G.H.G.
33.899.890.7Os05g0477600U85246.1-Alpha-expansin OsEXPA42e-16At1g69530ATEXPA1 (ARABIDOPSIS THALIANA EXPANSIN A1)O.I.C.G.H.G.
33.899.864.1Os01g0799500AU066087-Methyladenine glycosylase family protein1e-8At3g12710methyladenine glycosylase family proteinO.I.C.G.H.G.
33.599.82.8Os08g0509400AK059210.1-Glycoside hydrolase, family 1 protein4e-3At3g09260PYK10O.I.C.G.H.G.
32.199.734.6Os08g0199400AK105852.1-Fatty acid desaturase, type 2 family protein3e-3At5g16230acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.C.G.H.G.
32.099.72.8Os08g0124000AK067378.1-Resistance protein candidate (Fragment)8e-2At4g39040RNA bindingO.I.C.G.H.G.
31.999.74.3Os08g0450100AK058651.1-Pectinesterase (EC 3.1.1.11) (Fragment)2e-2At1g11370pectinesterase family proteinO.I.C.G.H.G.
31.899.779.9Os03g0676300AK108103.1-P-type trefoil domain containing protein7e+0At3g28210PMZO.I.C.G.H.G.
31.799.79.0Os04g0175900AK061551.1-0-methyltransferase (EC 2.1.1.6) (Fragment)1e-2At1g33030O-methyltransferase family 2 proteinO.I.C.G.H.G.
31.199.7410.7Os01g0348900AF435970.1-Jacalin-related lectin domain containing protein2e+0At1g0108033 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp33, putativeO.I.C.G.H.G.
30.499.79.0Os03g0118800AK071039.1-HMG-CoA synthase2e-32At4g11820MVA1O.I.C.G.H.G.
30.499.72.4Os02g0303500AK059847.1-Eggshell protein family protein2e-3At5g46730glycine-rich proteinO.I.C.G.H.G.
30.299.70.6Os01g0594300AK105670.1-Extensin-like protein4e+0At4g13340leucine-rich repeat family protein / extensin family proteinO.I.C.G.H.G.
30.199.77.6Os12g0170800AK059809.1-24 kDa protein SC24 (24 kDa seed coat protein)5e-1At3g50670U1-70K (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K)O.I.C.G.H.G.
30.199.71.6Os03g0348900AK059950.1-CHY zinc finger domain containing protein3e-2At3g62970protein binding / zinc ion bindingO.I.C.G.H.G.
29.799.712.7Os06g0655200AK121090.1-Pollen allergen Lol p2 family protein5e+0At5g08080SYP132 (SYNTAXIN OF PLANTS 132)O.I.C.G.H.G.
29.699.729.3Os10g0370500AK065000.1-Glycoside hydrolase, family 5 protein2e-2At5g37550unknown proteinO.I.C.G.H.G.
29.599.776.7Os05g0209600AY580163.1-Lipolytic enzyme, G-D-S-L family protein2e-1At5g03980GDSL-motif lipase/hydrolase family proteinO.I.C.G.H.G.
29.399.71.2Os02g0178700AK110943.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein5e-1At2g40475unknown proteinO.I.C.G.H.G.
29.299.72.8Os09g0433000AK063243.1-Conserved hypothetical protein4e+0At2g42360zinc finger (C3HC4-type RING finger) family proteinO.I.C.G.H.G.
28.799.621.4Os04g0474800AK100820.1-Glycoside hydrolase, family 1 protein3e-3At5g42260BGLU12 (BETA GLUCOSIDASE 12)O.I.C.G.H.G.
28.799.64.8Os08g0550200AK070238.1-Multi antimicrobial extrusion protein MatE familyprotein4e-3At1g23300MATE efflux family proteinO.I.C.G.H.G.
28.599.62.4Os04g0180400AK071546.1-Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment)6e-5At5g47990CYP705A5O.I.C.G.H.G.
28.499.63.1Os01g0627900AB038597.1-Cytochrome P450 monooxygenase CYP72A5 (Fragment)9e-4At1g17060CYP72C1 (CYTOCHROME P450 72C1)O.I.C.G.H.G.
27.699.67.6Os07g0694300AK061013.1-Fungal lignin peroxidase family protein1e-1At3g50220unknown proteinO.I.C.G.H.G.
27.299.61.4Os02g0594700AK111339.1-Conserved hypothetical protein4e-1At3g16870zinc finger (GATA type) family proteinO.I.C.G.H.G.
27.099.65.0Os11g05918009639.m03440-Wound-induced protein WIN2 precursor4e-9At3g04720PR4 (PATHOGENESIS-RELATED 4)O.I.C.G.H.G.
26.999.63.4Os03g0314500AK065474.1-Quinonprotein alcohol dehydrogenase-like domaincontaining protein1e+0At1g13860dehydration-responsive protein-relatedO.I.C.G.H.G.
26.299.510.6Os01g0529800AK101002.1-The start codon is not identified.3e-4At1g25450KCS5 (3-KETOACYL-COA SYNTHASE 5)O.I.C.G.H.G.
25.499.538.5Os02g0658800AK059638.1-Beta-expansin4e-2At4g28250ATEXPB3 (ARABIDOPSIS THALIANA EXPANSIN B3)O.I.C.G.H.G.
25.499.56.4Os08g0544400AK107688.1-ABC transporter related domain containing protein2e-10At2g29940PDR3 (PLEIOTROPIC DRUG RESISTANCE 3)O.I.C.G.H.G.
24.599.41.4Os01g0609300AF093586-PDR-like ABC transporter (PDR3 ABC transporter)6e-1At3g18590plastocyanin-like domain-containing proteinO.I.C.G.H.G.
23.599.41.4Os08g0112300AK070381.1-Transferase family protein8e-1At3g03920Gar1 RNA-binding region family proteinO.I.C.G.H.G.
23.399.44.6Os01g0957600AK059235.1-Elicitor-inducible cytochrome P4503e+0At3g53280CYP71B5 (CYTOCHROME P450 71B5)O.I.C.G.H.G.
23.399.44.4Os10g0479500AK108805.1-Conserved hypothetical protein 730 family protein2e-7At2g37210-O.I.C.G.H.G.
23.299.313.4Os06g0215600AU222916-Oxo-phytodienoic acid reductase(12-oxophytodienoic acid reductase)6e-4At2g06050OPR3 (OPDA-REDUCTASE 3)O.I.C.G.H.G.
23.199.317.4Os02g0218800AK105964.1-Allene oxide synthase (EC 4.2.1.92)2e-1At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.C.G.H.G.
22.699.3124.4Os11g0289700AK065302.1-E-class P450, group I family protein4e+0At5g56075ATP binding / nucleotide binding / phenylalanine-tRNA ligaseO.I.C.G.H.G.
22.499.30.7Os02g0484200AK103832.1-Transferase family protein1e+1At5g18180Gar1 RNA-binding region family proteinO.I.C.G.H.G.
22.299.30.7Os09g0360500AK105487.1-Conserved hypothetical protein1e-2At5g48920TED7 (TRACHEARY ELEMENT DIFFERENTIATION-RELATED 7)O.I.C.G.H.G.
22.199.36.4Os09g0504000AK068607.1-Nucleotide sugar epimerase-like protein(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6)7e-11At1g02000GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)O.I.C.G.H.G.
22.099.335.3Os03g0341600AK067497.1-Hypothetical protein2e+0At4g36660unknown proteinO.I.C.G.H.G.
21.799.222.1Os03g0140200AK061292.1-Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)(P450-dependent fatty acid omega-hydroxylase)1e-1At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.C.G.H.G.
21.499.24.6Os11g0142400AK067423.1-Strictosidine synthase family protein1e-2At2g41290strictosidine synthase family proteinO.I.C.G.H.G.
21.499.22.4Os03g01706009631.m00676-Hypothetical protein3e-12At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.C.G.H.G.
21.399.26.0Os01g0130400AK063966.1-Alpha-xylosidase precursor (F24J5.20 protein)(At1g68560/F24J5_10)3e-2At1g68560XYL1 (ALPHA-XYLOSIDASE 1)O.I.C.G.H.G.



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