CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM157390

Assay name Sakakibara_1-9_DMSO-treatment-wild_Rep3_ATH1

GSE experiment GSE6832: Cytokinin treatment on aerial parts of seedlings

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
34.0 99.7 28.2 At4g30825 829206 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:cell cycle;C:nucleus;POMFBA O.I. C.G. H.G.
23.5 99.6 93.7 At3g59780 825147 - F:molecular_function unknown;P:biological_process unknown;C:nucleus, chloroplast;OBMFPV O.I. C.G. H.G.
18.6 99.5 296.6 At3g13470 820549 chaperonin, putative F:protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:in 7 components;BOMFPAV O.I. C.G. H.G.
18.6 99.5 72.7 At3g53900 824557 uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative F:uracil phosphoribosyltransferase activity;P:uracil salvage, nucleoside metabolic process;C:chloroplast;BOFMPA O.I. C.G. H.G.
18.3 99.5 267.8 At1g70370 843373 BURP domain-containing protein / polygalacturonase, putative F:polygalacturonase activity;P:biological_process unknown;C:endomembrane system;OBMPFAV O.I. C.G. H.G.
16.8 99.5 80.3 At5g52520 835328 OVA6 (OVULE ABORTION 6) F:proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:regulation of photosynthesis, seed development, embryo sac development, ovule development, tRNA aminoacylation for protein translation;C:mitochondrion, chloroplast, chloroplast stroma;BOAMFP O.I. C.G. H.G.
16.7 99.5 64.0 At4g13670 827001 PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5) F:unfolded protein binding, heat shock protein binding;P:protein folding, metabolic process;C:plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope;BOMPFAV O.I. C.G. H.G.
16.1 99.5 49.1 At1g31690 840056 amine oxidase/ copper ion binding / quinone binding F:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA O.I. C.G. H.G.
15.9 99.5 66.5 At1g61180 842411 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:plasma membrane;PMBOFA O.I. C.G. H.G.
15.7 99.5 109.3 At3g53560 824524 chloroplast lumen common family protein F:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOMPAF O.I. C.G. H.G.
15.0 99.4 22.4 At3g57180 824885 GTP binding F:GTP binding;P:biological_process unknown;C:chloroplast;MOBFPVA O.I. C.G. H.G.
14.3 99.4 26.9 At1g70070 843343 EMB25 (EMBRYO DEFECTIVE 25) Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. O.I. C.G. H.G.
14.2 99.4 97.5 At1g24170 839030 LGT9 Encodes a protein with putative galacturonosyltransferase activity. O.I. C.G. H.G.
14.1 99.4 54.8 At3g52750 824441 FTSZ2-2 Nuclear gene that encodes a plastidial division protein (FtsZ2-2). O.I. C.G. H.G.
13.7 99.4 18.0 At2g15820 816078 OTP51 (ORGANELLE TRANSCRIPT PROCESSING 51) Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage. O.I. C.G. H.G.
13.6 99.4 78.4 At3g54090 824576 pfkB-type carbohydrate kinase family protein F:kinase activity;P:acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:nucleus, chloroplast, nucleoid, cytoplasm;BOPAMF O.I. C.G. H.G.
13.4 99.4 411.4 At1g55490 841996 CPN60B (CHAPERONIN 60 BETA) encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro. O.I. C.G. H.G.
13.2 99.4 39.6 At5g54630 835552 zinc finger protein-related F:transcription factor activity;P:regulation of transcription;C:intracellular;PFMO O.I. C.G. H.G.
13.0 99.4 10.9 At3g63330 825508 protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA O.I. C.G. H.G.
12.2 99.3 232.2 At1g17220 838293 FUG1 (fu-gaeri1) Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. O.I. C.G. H.G.
12.1 99.3 90.4 At3g16000 820845 MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1) encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes. O.I. C.G. H.G.
12.1 99.3 21.8 At3g53700 824537 MEE40 (maternal effect embryo arrest 40) F:unknown;P:embryonic development ending in seed dormancy;C:chloroplast;POMFBA O.I. C.G. H.G.
12.0 99.3 124.7 At1g33040 840199 NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA O.I. C.G. H.G.
11.9 99.3 35.1 At3g49140 824075 - F:unknown;P:unknown;C:unknown;PBMOFVA O.I. C.G. H.G.
11.5 99.3 33.7 At1g11870 837734 SRS (SERYL-TRNA SYNTHETASE) Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. O.I. C.G. H.G.
10.9 99.2 275.6 At5g23060 832370 CaS (Calcium sensing receptor) F:unknown;P:unknown;C:thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast;PBOFM O.I. C.G. H.G.
10.9 99.2 137.7 At1g08520 837374 CHLD F:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVA O.I. C.G. H.G.
10.9 99.2 35.1 At1g69730 843309 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA O.I. C.G. H.G.
10.8 99.2 37.6 At3g16290 820876 EMB2083 (embryo defective 2083) F:in 8 functions;P:embryonic development ending in seed dormancy;C:chloroplast, chloroplast envelope;OBMFPAV O.I. C.G. H.G.
10.5 99.2 243.9 At4g09010 826480 APX4 (ASCORBATE PEROXIDASE 4) Encodes a microsomal ascorbate peroxidase APX4. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. O.I. C.G. H.G.
10.4 99.2 98.6 At5g44650 834494 unknown protein F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast;PMO O.I. C.G. H.G.
10.3 99.2 20.8 At1g73090 843640 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P O.I. C.G. H.G.
10.0 99.2 100.9 At3g24430 822033 HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101) encodes a MRP-like protein with a nucleotide-binding domain. O.I. C.G. H.G.
9.9 99.1 102.2 At2g41680 818766 NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C) Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage. O.I. C.G. H.G.
9.9 99.1 43.4 At2g34640 818029 PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. O.I. C.G. H.G.
9.8 99.1 17.9 At3g16010 820846 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POMFBA O.I. C.G. H.G.
9.7 99.1 53.2 At5g17670 831633 hydrolase, acting on ester bonds F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOP O.I. C.G. H.G.
9.7 99.1 27.7 At4g25870 828693 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;POB O.I. C.G. H.G.
9.6 99.1 177.3 At1g03630 839009 POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE) Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent. O.I. C.G. H.G.
9.6 99.1 147.6 At3g51820 824345 G4 Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP. O.I. C.G. H.G.
9.2 99.1 194.3 At5g09650 830824 AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6) Encodes a protein with inorganic pyrophosphatase activity. O.I. C.G. H.G.
9.2 99.1 46.8 At5g36210 833618 serine-type peptidase F:serine-type peptidase activity;P:proteolysis;C:chloroplast;BOMFAP O.I. C.G. H.G.
9.2 99.1 36.7 At1g05150 839312 calcium-binding EF hand family protein F:binding, zinc ion binding, calcium ion binding;P:biological_process unknown;C:plasma membrane;BOMAPF O.I. C.G. H.G.
9.1 99.1 27.0 At5g07240 830615 IQD24 (IQ-domain 24) F:calmodulin binding;P:biological_process unknown;C:unknown;PMOB O.I. C.G. H.G.
9.0 99.1 57.9 At1g32500 840144 ATNAP6 (NON-INTRINSIC ABC PROTEIN 6) Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data. O.I. C.G. H.G.
8.9 99.0 9.2 At1g69550 843291 disease resistance protein (TIR-NBS class), putative F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMF O.I. C.G. H.G.
8.8 99.0 40.0 At3g59040 825073 pentatricopeptide (PPR) repeat-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBA O.I. C.G. H.G.
8.8 99.0 38.9 At3g48110 823966 EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1) glycine-tRNA ligase O.I. C.G. H.G.
8.7 99.0 76.7 At1g31800 840067 CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3) Encodes a protein with β-ring carotenoid hydroxylase activity. O.I. C.G. H.G.
8.7 99.0 9.8 At2g23950 816928 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA O.I. C.G. H.G.
8.6 99.0 89.4 At4g00370 827908 ANTR2 Encodes an inorganic phosphate transporter (PHT4;4). O.I. C.G. H.G.
8.6 99.0 30.7 At3g47490 823903 HNH endonuclease domain-containing protein F:nucleic acid binding, endonuclease activity;P:biological_process unknown;C:cellular_component unknown;POB O.I. C.G. H.G.
8.6 99.0 8.7 At4g37380 829892 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:unknown;POMFB O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
34.0	99.7	28.2	At4g30825	829206	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:cell cycle;C:nucleus;POMFBA	O.I.	C.G.	H.G.
23.5	99.6	93.7	At3g59780	825147	-	F:molecular_function unknown;P:biological_process unknown;C:nucleus, chloroplast;OBMFPV	O.I.	C.G.	H.G.
18.6	99.5	296.6	At3g13470	820549	chaperonin, putative	F:protein binding, ATP binding;P:protein folding, cellular protein metabolic process;C:in 7 components;BOMFPAV	O.I.	C.G.	H.G.
18.6	99.5	72.7	At3g53900	824557	uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative	F:uracil phosphoribosyltransferase activity;P:uracil salvage, nucleoside metabolic process;C:chloroplast;BOFMPA	O.I.	C.G.	H.G.
18.3	99.5	267.8	At1g70370	843373	BURP domain-containing protein / polygalacturonase, putative	F:polygalacturonase activity;P:biological_process unknown;C:endomembrane system;OBMPFAV	O.I.	C.G.	H.G.
16.8	99.5	80.3	At5g52520	835328	OVA6 (OVULE ABORTION 6)	F:proline-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding;P:regulation of photosynthesis, seed development, embryo sac development, ovule development, tRNA aminoacylation for protein translation;C:mitochondrion, chloroplast, chloroplast stroma;BOAMFP	O.I.	C.G.	H.G.
16.7	99.5	64.0	At4g13670	827001	PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)	F:unfolded protein binding, heat shock protein binding;P:protein folding, metabolic process;C:plastid chromosome, chloroplast thylakoid membrane, chloroplast, nucleoid, chloroplast envelope;BOMPFAV	O.I.	C.G.	H.G.
16.1	99.5	49.1	At1g31690	840056	amine oxidase/ copper ion binding / quinone binding	F:quinone binding, amine oxidase activity, copper ion binding;P:cellular amine metabolic process;C:endomembrane system;FBMOPA	O.I.	C.G.	H.G.
15.9	99.5	66.5	At1g61180	842411	disease resistance protein (CC-NBS-LRR class), putative	F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:plasma membrane;PMBOFA	O.I.	C.G.	H.G.
15.7	99.5	109.3	At3g53560	824524	chloroplast lumen common family protein	F:binding;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast thylakoid lumen, chloroplast;BOMPAF	O.I.	C.G.	H.G.
15.0	99.4	22.4	At3g57180	824885	GTP binding	F:GTP binding;P:biological_process unknown;C:chloroplast;MOBFPVA	O.I.	C.G.	H.G.
14.3	99.4	26.9	At1g70070	843343	EMB25 (EMBRYO DEFECTIVE 25)	Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.	O.I.	C.G.	H.G.
14.2	99.4	97.5	At1g24170	839030	LGT9	Encodes a protein with putative galacturonosyltransferase activity.	O.I.	C.G.	H.G.
14.1	99.4	54.8	At3g52750	824441	FTSZ2-2	Nuclear gene that encodes a plastidial division protein (FtsZ2-2).	O.I.	C.G.	H.G.
13.7	99.4	18.0	At2g15820	816078	OTP51 (ORGANELLE TRANSCRIPT PROCESSING 51)	Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage.	O.I.	C.G.	H.G.
13.6	99.4	78.4	At3g54090	824576	pfkB-type carbohydrate kinase family protein	F:kinase activity;P:acetate fermentation, sucrose biosynthetic process, sucrose catabolic process, using beta-fructofuranosidase;C:nucleus, chloroplast, nucleoid, cytoplasm;BOPAMF	O.I.	C.G.	H.G.
13.4	99.4	411.4	At1g55490	841996	CPN60B (CHAPERONIN 60 BETA)	encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.	O.I.	C.G.	H.G.
13.2	99.4	39.6	At5g54630	835552	zinc finger protein-related	F:transcription factor activity;P:regulation of transcription;C:intracellular;PFMO	O.I.	C.G.	H.G.
13.0	99.4	10.9	At3g63330	825508	protein kinase family protein	F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVA	O.I.	C.G.	H.G.
12.2	99.3	232.2	At1g17220	838293	FUG1 (fu-gaeri1)	Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.	O.I.	C.G.	H.G.
12.1	99.3	90.4	At3g16000	820845	MFP1 (MAR BINDING FILAMENT-LIKE PROTEIN 1)	encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.	O.I.	C.G.	H.G.
12.1	99.3	21.8	At3g53700	824537	MEE40 (maternal effect embryo arrest 40)	F:unknown;P:embryonic development ending in seed dormancy;C:chloroplast;POMFBA	O.I.	C.G.	H.G.
12.0	99.3	124.7	At1g33040	840199	NACA5 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPBVA	O.I.	C.G.	H.G.
11.9	99.3	35.1	At3g49140	824075	-	F:unknown;P:unknown;C:unknown;PBMOFVA	O.I.	C.G.	H.G.
11.5	99.3	33.7	At1g11870	837734	SRS (SERYL-TRNA SYNTHETASE)	Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.	O.I.	C.G.	H.G.
10.9	99.2	275.6	At5g23060	832370	CaS (Calcium sensing receptor)	F:unknown;P:unknown;C:thylakoid, mitochondrion, chloroplast thylakoid membrane, chloroplast;PBOFM	O.I.	C.G.	H.G.
10.9	99.2	137.7	At1g08520	837374	CHLD	F:magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:chlorophyll biosynthetic process;C:magnesium chelatase complex, chloroplast;MOBFPVA	O.I.	C.G.	H.G.
10.9	99.2	35.1	At1g69730	843309	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system, integral to membrane;MPOBFVA	O.I.	C.G.	H.G.
10.8	99.2	37.6	At3g16290	820876	EMB2083 (embryo defective 2083)	F:in 8 functions;P:embryonic development ending in seed dormancy;C:chloroplast, chloroplast envelope;OBMFPAV	O.I.	C.G.	H.G.
10.5	99.2	243.9	At4g09010	826480	APX4 (ASCORBATE PEROXIDASE 4)	Encodes a microsomal ascorbate peroxidase APX4. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.	O.I.	C.G.	H.G.
10.4	99.2	98.6	At5g44650	834494	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:thylakoid, chloroplast thylakoid membrane, chloroplast;PMO	O.I.	C.G.	H.G.
10.3	99.2	20.8	At1g73090	843640	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;P	O.I.	C.G.	H.G.
10.0	99.2	100.9	At3g24430	822033	HCF101 (HIGH-CHLOROPHYLL-FLUORESCENCE 101)	encodes a MRP-like protein with a nucleotide-binding domain.	O.I.	C.G.	H.G.
9.9	99.1	102.2	At2g41680	818766	NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C)	Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.	O.I.	C.G.	H.G.
9.9	99.1	43.4	At2g34640	818029	PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12)	Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.	O.I.	C.G.	H.G.
9.8	99.1	17.9	At3g16010	820846	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POMFBA	O.I.	C.G.	H.G.
9.7	99.1	53.2	At5g17670	831633	hydrolase, acting on ester bonds	F:hydrolase activity, acting on ester bonds;P:intracellular protein transport, GPI anchor metabolic process;C:chloroplast, chloroplast envelope;BOP	O.I.	C.G.	H.G.
9.7	99.1	27.7	At4g25870	828693	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:unknown;POB	O.I.	C.G.	H.G.
9.6	99.1	177.3	At1g03630	839009	POR C (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE)	Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.	O.I.	C.G.	H.G.
9.6	99.1	147.6	At3g51820	824345	G4	Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.	O.I.	C.G.	H.G.
9.2	99.1	194.3	At5g09650	830824	AtPPa6 (Arabidopsis thaliana pyrophosphorylase 6)	Encodes a protein with inorganic pyrophosphatase activity.	O.I.	C.G.	H.G.
9.2	99.1	46.8	At5g36210	833618	serine-type peptidase	F:serine-type peptidase activity;P:proteolysis;C:chloroplast;BOMFAP	O.I.	C.G.	H.G.
9.2	99.1	36.7	At1g05150	839312	calcium-binding EF hand family protein	F:binding, zinc ion binding, calcium ion binding;P:biological_process unknown;C:plasma membrane;BOMAPF	O.I.	C.G.	H.G.
9.1	99.1	27.0	At5g07240	830615	IQD24 (IQ-domain 24)	F:calmodulin binding;P:biological_process unknown;C:unknown;PMOB	O.I.	C.G.	H.G.
9.0	99.1	57.9	At1g32500	840144	ATNAP6 (NON-INTRINSIC ABC PROTEIN 6)	Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.	O.I.	C.G.	H.G.
8.9	99.0	9.2	At1g69550	843291	disease resistance protein (TIR-NBS class), putative	F:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, endomembrane system;PBOMF	O.I.	C.G.	H.G.
8.8	99.0	40.0	At3g59040	825073	pentatricopeptide (PPR) repeat-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBA	O.I.	C.G.	H.G.
8.8	99.0	38.9	At3g48110	823966	EDD1 (EMBRYO-DEFECTIVE-DEVELOPMENT 1)	glycine-tRNA ligase	O.I.	C.G.	H.G.
8.7	99.0	76.7	At1g31800	840067	CYP97A3 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3)	Encodes a protein with β-ring carotenoid hydroxylase activity.	O.I.	C.G.	H.G.
8.7	99.0	9.8	At2g23950	816928	leucine-rich repeat family protein / protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA	O.I.	C.G.	H.G.
8.6	99.0	89.4	At4g00370	827908	ANTR2	Encodes an inorganic phosphate transporter (PHT4;4).	O.I.	C.G.	H.G.
8.6	99.0	30.7	At3g47490	823903	HNH endonuclease domain-containing protein	F:nucleic acid binding, endonuclease activity;P:biological_process unknown;C:cellular_component unknown;POB	O.I.	C.G.	H.G.
8.6	99.0	8.7	At4g37380	829892	pentatricopeptide (PPR) repeat-containing protein	F:unknown;P:biological_process unknown;C:unknown;POMFB	O.I.	C.G.	H.G.

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GSM ID	GSM157390
Assay name	Sakakibara_1-9_DMSO-treatment-wild_Rep3_ATH1
GSE experiment	GSE6832: Cytokinin treatment on aerial parts of seedlings

Microarray experiments to specifically-expressed genes

GSM ID GSM157390 Assay name Sakakibara_1-9_DMSO-treatment-wild_Rep3_ATH1 GSE experiment GSE6832: Cytokinin treatment on aerial parts of seedlings

GSM ID GSM157390

Assay name Sakakibara_1-9_DMSO-treatment-wild_Rep3_ATH1

GSE experiment GSE6832: Cytokinin treatment on aerial parts of seedlings