CoP: Co-expressed Biological Processes

Microarray experiments to specifically-expressed genes

GSM ID GSM157312

Assay name Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1

GSE experiment GSE6825: Differential gene expression patterns in potassium-starved and Caesium-treated plants

Click Gene ID to show a list of GSM assays in which the gene are specifically expressed.

Std2 GX %ile Std GX Gene ID Repr. ID Gene name Functional description O.I. C.G. H.G. Other DB
118.2 99.9 117.0 At4g25000 828603 AMY1 (ALPHA-AMYLASE-LIKE) Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830). O.I. C.G. H.G.
117.0 99.9 100.2 At1g16510 838221 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
82.1 99.9 253.5 At3g51860 824349 CAX3 (CATION EXCHANGER 3) F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM O.I. C.G. H.G.
80.5 99.9 184.4 At4g18280 827554 glycine-rich cell wall protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown O.I. C.G. H.G.
78.7 99.9 116.0 At3g50770 824241 calmodulin-related protein, putative F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB O.I. C.G. H.G.
77.4 99.9 306.1 At2g18660 816381 EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein. O.I. C.G. H.G.
67.1 99.8 78.3 At1g58420 842211 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
60.0 99.8 60.4 At5g64000 836521 SAL2 3'(2'),5'-bisphosphate nucleotidase O.I. C.G. H.G.
56.0 99.8 99.7 At2g32680 817828 AtRLP23 (Receptor Like Protein 23) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
45.9 99.8 270.8 At4g19200 827660 proline-rich family protein F:unknown;P:unknown;C:unknown;MBPFOVA O.I. C.G. H.G.
44.3 99.8 35.3 At4g01130 828207 acetylesterase, putative F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM O.I. C.G. H.G.
39.2 99.8 47.1 At4g04500 825780 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
35.4 99.7 554.8 At1g75040 843842 PR5 (PATHOGENESIS-RELATED GENE 5) Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment. O.I. C.G. H.G.
35.1 99.7 152.8 At5g18470 831965 curculin-like (mannose-binding) lectin family protein F:sugar binding;P:biological_process unknown;C:plant-type cell wall;P O.I. C.G. H.G.
32.6 99.7 74.3 At3g47380 823892 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
31.4 99.7 108.6 At4g10500 826642 oxidoreductase, 2OG-Fe(II) oxygenase family protein F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM O.I. C.G. H.G.
31.2 99.7 192.1 At1g55210 841964 disease resistance response F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P O.I. C.G. H.G.
29.9 99.7 252.8 At5g10380 830902 RING1 Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators. O.I. C.G. H.G.
29.2 99.7 269.9 At2g43570 818959 chitinase, putative F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV O.I. C.G. H.G.
27.7 99.7 433.3 At3g57260 824893 BGL2 (BETA-1,3-GLUCANASE 2) beta 1,3-glucanase O.I. C.G. H.G.
27.7 99.7 49.8 At1g56150 842068 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
27.0 99.7 66.2 At5g52390 835315 photoassimilate-responsive protein, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
26.3 99.7 35.4 At2g42360 818837 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV O.I. C.G. H.G.
25.7 99.7 251.0 At1g65490 842861 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P O.I. C.G. H.G.
24.3 99.6 12.9 At1g76530 843986 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO O.I. C.G. H.G.
23.4 99.6 56.0 At3g60520 825223 unknown protein F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
23.3 99.6 122.3 At1g68570 843186 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF O.I. C.G. H.G.
22.8 99.6 26.0 At1g72240 843556 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
22.2 99.6 287.3 At5g10760 830943 aspartyl protease family protein F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO O.I. C.G. H.G.
21.5 99.6 39.0 At3g12830 820465 auxin-responsive family protein F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
21.3 99.6 28.1 At1g20350 838623 ATTIM17-1 mitochondrial inner membrane translocase O.I. C.G. H.G.
20.7 99.6 62.0 At4g28390 828955 AAC3 (ADP/ATP CARRIER 3) Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli). O.I. C.G. H.G.
20.2 99.6 43.9 At3g10190 820181 calmodulin, putative F:calcium ion binding;P:biological_process unknown;C:plasma membrane;MPFOB O.I. C.G. H.G.
19.5 99.6 11.0 At5g20430 832165 mob1/phocein family protein F:protein binding;P:biological_process unknown;C:nucleus, phragmoplast;MFOP O.I. C.G. H.G.
18.0 99.5 265.6 At5g55450 835638 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein F:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;P O.I. C.G. H.G.
17.6 99.5 71.1 At5g39670 833963 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB O.I. C.G. H.G.
17.4 99.5 51.1 At5g50720 835144 ATHVA22E Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration. O.I. C.G. H.G.
17.0 99.5 22.5 At5g43910 834413 pfkB-type carbohydrate kinase family protein F:kinase activity, ribokinase activity;P:D-ribose metabolic process;C:cellular_component unknown;BOMPAF O.I. C.G. H.G.
15.9 99.5 41.8 At2g12290 815700 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
15.7 99.5 73.6 At5g45800 834620 MEE62 (maternal effect embryo arrest 62) F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:embryonic development ending in seed dormancy, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOBFVA O.I. C.G. H.G.
15.4 99.5 18.6 At1g14260 837987 zinc finger (C3HC4-type RING finger) family protein F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV O.I. C.G. H.G.
15.2 99.4 55.4 At3g60540 825225 sec61beta family protein F:protein transporter activity;P:protein transport;C:unknown;MFPO O.I. C.G. H.G.
15.0 99.4 77.5 At1g50290 841451 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:cytosol;P O.I. C.G. H.G.
14.9 99.4 61.6 At1g21525 3766777 - pseudogene of unknown protein O.I. C.G. H.G.
14.2 99.4 91.7 At3g47540 823908 chitinase, putative F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF O.I. C.G. H.G.
13.9 99.4 20.2 At2g28710 817420 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMO O.I. C.G. H.G.
13.7 99.4 26.6 At1g34180 840317 anac016 (Arabidopsis NAC domain containing protein 16) F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P O.I. C.G. H.G.
13.5 99.4 24.9 At3g52710 824437 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
13.3 99.4 7.6 At2g22200 816754 AP2 domain-containing transcription factor encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4. O.I. C.G. H.G.
13.2 99.4 34.8 At5g12890 831129 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF O.I. C.G. H.G.
12.9 99.3 155.6 At1g08450 837365 CRT3 (CALRETICULIN 3) Encodes calreticulin CRT3. O.I. C.G. H.G.
12.9 99.3 24.3 At1g16500 838220 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFV O.I. C.G. H.G.
12.7 99.3 198.6 At1g18210 838401 calcium-binding protein, putative F:calcium ion binding;P:biological_process unknown;C:plasma membrane, vacuole;MFPOB O.I. C.G. H.G.
12.7 99.3 32.3 At1g05000 839348 tyrosine specific protein phosphatase family protein F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBM O.I. C.G. H.G.
12.5 99.3 364.0 At2g46600 819272 calcium-binding protein, putative F:calcium ion binding;P:unknown;C:cellular_component unknown;MPOFB O.I. C.G. H.G.
12.5 99.3 29.2 At1g23840 838995 unknown protein F:unknown;P:unknown;C:endomembrane system;P O.I. C.G. H.G.
12.4 99.3 54.7 At1g20070 838596 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P O.I. C.G. H.G.
12.4 99.3 47.1 At1g23850 838996 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
12.3 99.3 51.7 At1g66880 843006 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA O.I. C.G. H.G.
11.9 99.3 30.0 At2g39710 818555 aspartyl protease family protein Encodes a Cysteine-rich peptide (CRP) family protein O.I. C.G. H.G.
11.8 99.3 273.9 At2g41410 818739 calmodulin, putative F:calcium ion binding;P:unknown;C:plasma membrane;MPFOB O.I. C.G. H.G.
11.8 99.3 22.2 At4g23880 828487 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPF O.I. C.G. H.G.
11.8 99.3 12.7 At1g53100 841744 acetylglucosaminyltransferase F:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO O.I. C.G. H.G.
11.7 99.3 62.0 At4g00490 827959 BAM2 (BETA-AMYLASE 2) Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype. O.I. C.G. H.G.
11.6 99.3 40.2 At5g19875 832109 unknown protein F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;P O.I. C.G. H.G.
11.6 99.3 34.2 At4g04540 825785 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA O.I. C.G. H.G.
11.6 99.3 15.4 At2g25690 817110 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
11.4 99.3 48.8 At4g17670 827487 senescence-associated protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
10.7 99.2 65.2 At1g48320 841252 thioesterase family protein F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPM O.I. C.G. H.G.
10.6 99.2 30.9 At2g35820 818155 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO O.I. C.G. H.G.
10.5 99.2 118.2 At1g63840 842687 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:response to abscisic acid stimulus;C:endomembrane system;PMOFV O.I. C.G. H.G.
10.4 99.2 15.5 At2g21510 816690 DNAJ heat shock N-terminal domain-containing protein F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV O.I. C.G. H.G.
10.3 99.2 13.3 At2g29090 817457 CYP707A2 Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition. O.I. C.G. H.G.
10.2 99.2 30.7 At5g41400 834142 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVB O.I. C.G. H.G.
10.2 99.2 21.1 At3g23110 821886 AtRLP37 (Receptor Like Protein 37) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
10.0 99.2 13.4 At1g16530 838223 ASL9 (ASYMMETRIC LEAVES 2 LIKE 9) F:unknown;P:biological_process unknown;C:cellular_component unknown;P O.I. C.G. H.G.
9.7 99.1 10.7 At3g47090 823862 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVA O.I. C.G. H.G.
9.5 99.1 221.9 At5g13190 831158 - F:unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
9.4 99.1 160.8 At2g43510 818952 ATTI1 Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. O.I. C.G. H.G.
9.4 99.1 18.9 At1g25370 839122 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM O.I. C.G. H.G.
9.3 99.1 43.0 At3g47480 823902 calcium-binding EF hand family protein F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB O.I. C.G. H.G.
9.2 99.1 85.0 At1g01140 839349 CIPK9 (CBL-INTERACTING PROTEIN KINASE 9) Encodes a CBL-interacting protein kinase with similarity to SOS2 O.I. C.G. H.G.
9.2 99.1 23.7 At3g05650 819732 AtRLP32 (Receptor Like Protein 32) F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV O.I. C.G. H.G.
9.0 99.1 97.7 At1g31130 839998 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOA O.I. C.G. H.G.
9.0 99.1 47.5 At3g13560 820558 glycosyl hydrolase family 17 protein F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFO O.I. C.G. H.G.
8.9 99.0 116.8 At3g60420 825213 - F:unknown;P:unknown;C:cellular_component unknown;OBFPM O.I. C.G. H.G.
8.9 99.0 55.7 At3g60690 825240 auxin-responsive family protein F:unknown;P:response to auxin stimulus;C:unknown;PO O.I. C.G. H.G.
8.9 99.0 41.5 At3g22160 821780 VQ motif-containing protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBV O.I. C.G. H.G.
8.8 99.0 96.8 At2g30140 817566 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to cyclopentenone;C:cellular_component unknown;PMBVOF O.I. C.G. H.G.
8.8 99.0 36.6 At1g67970 843125 AT-HSFA8 member of Heat Stress Transcription Factor (Hsf) family O.I. C.G. H.G.
8.7 99.0 353.8 At2g23120 816844 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P O.I. C.G. H.G.
8.7 99.0 84.4 At2g30550 817604 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV O.I. C.G. H.G.
8.6 99.0 34.0 At1g12990 837857 glycosyl transferase family 17 protein F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV O.I. C.G. H.G.

Std2 GX	%ile	Std GX	Gene ID	Repr. ID	Gene name	Functional description	O.I.	C.G.	H.G.
118.2	99.9	117.0	At4g25000	828603	AMY1 (ALPHA-AMYLASE-LIKE)	Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).	O.I.	C.G.	H.G.
117.0	99.9	100.2	At1g16510	838221	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
82.1	99.9	253.5	At3g51860	824349	CAX3 (CATION EXCHANGER 3)	F:cation:cation antiporter activity, calcium:cation antiporter activity, calcium:hydrogen antiporter activity;P:in 9 processes;C:plant-type vacuole membrane, vacuolar membrane, vacuole;BFOPAM	O.I.	C.G.	H.G.
80.5	99.9	184.4	At4g18280	827554	glycine-rich cell wall protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown	O.I.	C.G.	H.G.
78.7	99.9	116.0	At3g50770	824241	calmodulin-related protein, putative	F:calcium ion binding;P:biological_process unknown;C:chloroplast;MFPOB	O.I.	C.G.	H.G.
77.4	99.9	306.1	At2g18660	816381	EXLB3 (EXPANSIN-LIKE B3 PRECURSOR)	Encodes PNP-A (Plant Natriuretic Peptide A). PNPs are a class of systemically mobile molecules distantly related to expansins; their biological role has remained elusive. PNP-A contains a signal peptide domain and is secreted into the extracellular space. Co-expression analyses using microarray data suggest that PNP-A may function as a component of plant defence response and SAR in particular, and could be classified as a newly identified PR protein.	O.I.	C.G.	H.G.
67.1	99.8	78.3	At1g58420	842211	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
60.0	99.8	60.4	At5g64000	836521	SAL2	3'(2'),5'-bisphosphate nucleotidase	O.I.	C.G.	H.G.
56.0	99.8	99.7	At2g32680	817828	AtRLP23 (Receptor Like Protein 23)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
45.9	99.8	270.8	At4g19200	827660	proline-rich family protein	F:unknown;P:unknown;C:unknown;MBPFOVA	O.I.	C.G.	H.G.
44.3	99.8	35.3	At4g01130	828207	acetylesterase, putative	F:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOM	O.I.	C.G.	H.G.
39.2	99.8	47.1	At4g04500	825780	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
35.4	99.7	554.8	At1g75040	843842	PR5 (PATHOGENESIS-RELATED GENE 5)	Thaumatin-like protein involved in response to pathogens. mRNA level of the PR-5 gene (At1g75040)is significantly changed after cutting the inflorescence stem indicating the existence of a network of signal transducing pathways as other stress-regulated genes (At5g01410, At3g17800, At1g29930)do not response to the treatment.	O.I.	C.G.	H.G.
35.1	99.7	152.8	At5g18470	831965	curculin-like (mannose-binding) lectin family protein	F:sugar binding;P:biological_process unknown;C:plant-type cell wall;P	O.I.	C.G.	H.G.
32.6	99.7	74.3	At3g47380	823892	invertase/pectin methylesterase inhibitor family protein	F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
31.4	99.7	108.6	At4g10500	826642	oxidoreductase, 2OG-Fe(II) oxygenase family protein	F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:unknown;POBFM	O.I.	C.G.	H.G.
31.2	99.7	192.1	At1g55210	841964	disease resistance response	F:molecular_function unknown;P:lignan biosynthetic process, defense response;C:endomembrane system;P	O.I.	C.G.	H.G.
29.9	99.7	252.8	At5g10380	830902	RING1	Encodes a RING finger domain protein with E3 ligase activity that is localized to the lipid rafts of the plasma membrane. Expression is increased in response to fungal pathogen. May be involved in regulation of programmed cell death by facilitating degredation of regulation of PDC activators.	O.I.	C.G.	H.G.
29.2	99.7	269.9	At2g43570	818959	chitinase, putative	F:chitin binding, chitinase activity;P:cell wall macromolecule catabolic process;C:apoplast, plant-type cell wall;PBFOMV	O.I.	C.G.	H.G.
27.7	99.7	433.3	At3g57260	824893	BGL2 (BETA-1,3-GLUCANASE 2)	beta 1,3-glucanase	O.I.	C.G.	H.G.
27.7	99.7	49.8	At1g56150	842068	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
27.0	99.7	66.2	At5g52390	835315	photoassimilate-responsive protein, putative	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
26.3	99.7	35.4	At2g42360	818837	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV	O.I.	C.G.	H.G.
25.7	99.7	251.0	At1g65490	842861	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
24.3	99.6	12.9	At1g76530	843986	auxin efflux carrier family protein	F:auxin:hydrogen symporter activity;P:auxin polar transport;C:endomembrane system, integral to membrane;PFO	O.I.	C.G.	H.G.
23.4	99.6	56.0	At3g60520	825223	unknown protein	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
23.3	99.6	122.3	At1g68570	843186	proton-dependent oligopeptide transport (POT) family protein	F:transporter activity;P:oligopeptide transport;C:membrane;BPMOF	O.I.	C.G.	H.G.
22.8	99.6	26.0	At1g72240	843556	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
22.2	99.6	287.3	At5g10760	830943	aspartyl protease family protein	F:aspartic-type endopeptidase activity;P:proteolysis;C:apoplast;PMFO	O.I.	C.G.	H.G.
21.5	99.6	39.0	At3g12830	820465	auxin-responsive family protein	F:molecular_function unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
21.3	99.6	28.1	At1g20350	838623	ATTIM17-1	mitochondrial inner membrane translocase	O.I.	C.G.	H.G.
20.7	99.6	62.0	At4g28390	828955	AAC3 (ADP/ATP CARRIER 3)	Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).	O.I.	C.G.	H.G.
20.2	99.6	43.9	At3g10190	820181	calmodulin, putative	F:calcium ion binding;P:biological_process unknown;C:plasma membrane;MPFOB	O.I.	C.G.	H.G.
19.5	99.6	11.0	At5g20430	832165	mob1/phocein family protein	F:protein binding;P:biological_process unknown;C:nucleus, phragmoplast;MFOP	O.I.	C.G.	H.G.
18.0	99.5	265.6	At5g55450	835638	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	F:lipid binding;P:response to other organism, lipid transport;C:endomembrane system;P	O.I.	C.G.	H.G.
17.6	99.5	71.1	At5g39670	833963	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;MPFOB	O.I.	C.G.	H.G.
17.4	99.5	51.1	At5g50720	835144	ATHVA22E	Encodes one of five HVA22 homologs in Arabidopsis. HVA22 is an ABA- and stress-inducible gene first isolated from barley. Members of this gene family have only been found in eukaryotes. AtHVA22e mRNA is upregulated to varying degrees in response to cold stress, salt stress, ABA treatment or dehydration.	O.I.	C.G.	H.G.
17.0	99.5	22.5	At5g43910	834413	pfkB-type carbohydrate kinase family protein	F:kinase activity, ribokinase activity;P:D-ribose metabolic process;C:cellular_component unknown;BOMPAF	O.I.	C.G.	H.G.
15.9	99.5	41.8	At2g12290	815700	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
15.7	99.5	73.6	At5g45800	834620	MEE62 (maternal effect embryo arrest 62)	F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:embryonic development ending in seed dormancy, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOBFVA	O.I.	C.G.	H.G.
15.4	99.5	18.6	At1g14260	837987	zinc finger (C3HC4-type RING finger) family protein	F:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:unknown;C:unknown;MPOFV	O.I.	C.G.	H.G.
15.2	99.4	55.4	At3g60540	825225	sec61beta family protein	F:protein transporter activity;P:protein transport;C:unknown;MFPO	O.I.	C.G.	H.G.
15.0	99.4	77.5	At1g50290	841451	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:cytosol;P	O.I.	C.G.	H.G.
14.9	99.4	61.6	At1g21525	3766777	-	pseudogene of unknown protein	O.I.	C.G.	H.G.
14.2	99.4	91.7	At3g47540	823908	chitinase, putative	F:chitinase activity;P:cell wall macromolecule catabolic process;C:endomembrane system;PBMOF	O.I.	C.G.	H.G.
13.9	99.4	20.2	At2g28710	817420	zinc finger (C2H2 type) family protein	F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;PMO	O.I.	C.G.	H.G.
13.7	99.4	26.6	At1g34180	840317	anac016 (Arabidopsis NAC domain containing protein 16)	F:transcription factor activity;P:multicellular organismal development, response to chitin;C:cellular_component unknown;P	O.I.	C.G.	H.G.
13.5	99.4	24.9	At3g52710	824437	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
13.3	99.4	7.6	At2g22200	816754	AP2 domain-containing transcription factor	encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.	O.I.	C.G.	H.G.
13.2	99.4	34.8	At5g12890	831129	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOF	O.I.	C.G.	H.G.
12.9	99.3	155.6	At1g08450	837365	CRT3 (CALRETICULIN 3)	Encodes calreticulin CRT3.	O.I.	C.G.	H.G.
12.9	99.3	24.3	At1g16500	838220	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFV	O.I.	C.G.	H.G.
12.7	99.3	198.6	At1g18210	838401	calcium-binding protein, putative	F:calcium ion binding;P:biological_process unknown;C:plasma membrane, vacuole;MFPOB	O.I.	C.G.	H.G.
12.7	99.3	32.3	At1g05000	839348	tyrosine specific protein phosphatase family protein	F:phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity;P:dephosphorylation;C:cellular_component unknown;FPOBM	O.I.	C.G.	H.G.
12.5	99.3	364.0	At2g46600	819272	calcium-binding protein, putative	F:calcium ion binding;P:unknown;C:cellular_component unknown;MPOFB	O.I.	C.G.	H.G.
12.5	99.3	29.2	At1g23840	838995	unknown protein	F:unknown;P:unknown;C:endomembrane system;P	O.I.	C.G.	H.G.
12.4	99.3	54.7	At1g20070	838596	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	O.I.	C.G.	H.G.
12.4	99.3	47.1	At1g23850	838996	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
12.3	99.3	51.7	At1g66880	843006	serine/threonine protein kinase family protein	F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA	O.I.	C.G.	H.G.
11.9	99.3	30.0	At2g39710	818555	aspartyl protease family protein	Encodes a Cysteine-rich peptide (CRP) family protein	O.I.	C.G.	H.G.
11.8	99.3	273.9	At2g41410	818739	calmodulin, putative	F:calcium ion binding;P:unknown;C:plasma membrane;MPFOB	O.I.	C.G.	H.G.
11.8	99.3	22.2	At4g23880	828487	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPF	O.I.	C.G.	H.G.
11.8	99.3	12.7	At1g53100	841744	acetylglucosaminyltransferase	F:acetylglucosaminyltransferase activity;P:carbohydrate biosynthetic process;C:membrane;MPBVO	O.I.	C.G.	H.G.
11.7	99.3	62.0	At4g00490	827959	BAM2 (BETA-AMYLASE 2)	Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.	O.I.	C.G.	H.G.
11.6	99.3	40.2	At5g19875	832109	unknown protein	F:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;P	O.I.	C.G.	H.G.
11.6	99.3	34.2	At4g04540	825785	protein kinase family protein	F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA	O.I.	C.G.	H.G.
11.6	99.3	15.4	At2g25690	817110	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
11.4	99.3	48.8	At4g17670	827487	senescence-associated protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
10.7	99.2	65.2	At1g48320	841252	thioesterase family protein	F:hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity;P:biological_process unknown;C:cellular_component unknown;BOPM	O.I.	C.G.	H.G.
10.6	99.2	30.9	At2g35820	818155	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPO	O.I.	C.G.	H.G.
10.5	99.2	118.2	At1g63840	842687	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:response to abscisic acid stimulus;C:endomembrane system;PMOFV	O.I.	C.G.	H.G.
10.4	99.2	15.5	At2g21510	816690	DNAJ heat shock N-terminal domain-containing protein	F:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;BOMFPAV	O.I.	C.G.	H.G.
10.3	99.2	13.3	At2g29090	817457	CYP707A2	Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.	O.I.	C.G.	H.G.
10.2	99.2	30.7	At5g41400	834142	zinc finger (C3HC4-type RING finger) family protein	F:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFVB	O.I.	C.G.	H.G.
10.2	99.2	21.1	At3g23110	821886	AtRLP37 (Receptor Like Protein 37)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
10.0	99.2	13.4	At1g16530	838223	ASL9 (ASYMMETRIC LEAVES 2 LIKE 9)	F:unknown;P:biological_process unknown;C:cellular_component unknown;P	O.I.	C.G.	H.G.
9.7	99.1	10.7	At3g47090	823862	leucine-rich repeat transmembrane protein kinase, putative	F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:chloroplast;MPOBFVA	O.I.	C.G.	H.G.
9.5	99.1	221.9	At5g13190	831158	-	F:unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
9.4	99.1	160.8	At2g43510	818952	ATTI1	Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.	O.I.	C.G.	H.G.
9.4	99.1	18.9	At1g25370	839122	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	O.I.	C.G.	H.G.
9.3	99.1	43.0	At3g47480	823902	calcium-binding EF hand family protein	F:calcium ion binding;P:biological_process unknown;C:endomembrane system;MPFOB	O.I.	C.G.	H.G.
9.2	99.1	85.0	At1g01140	839349	CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)	Encodes a CBL-interacting protein kinase with similarity to SOS2	O.I.	C.G.	H.G.
9.2	99.1	23.7	At3g05650	819732	AtRLP32 (Receptor Like Protein 32)	F:protein binding, kinase activity;P:signal transduction, defense response;C:endomembrane system;PMOBFAV	O.I.	C.G.	H.G.
9.0	99.1	97.7	At1g31130	839998	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOA	O.I.	C.G.	H.G.
9.0	99.1	47.5	At3g13560	820558	glycosyl hydrolase family 17 protein	F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFO	O.I.	C.G.	H.G.
8.9	99.0	116.8	At3g60420	825213	-	F:unknown;P:unknown;C:cellular_component unknown;OBFPM	O.I.	C.G.	H.G.
8.9	99.0	55.7	At3g60690	825240	auxin-responsive family protein	F:unknown;P:response to auxin stimulus;C:unknown;PO	O.I.	C.G.	H.G.
8.9	99.0	41.5	At3g22160	821780	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POMFBV	O.I.	C.G.	H.G.
8.8	99.0	96.8	At2g30140	817566	UDP-glucoronosyl/UDP-glucosyl transferase family protein	F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:response to cyclopentenone;C:cellular_component unknown;PMBVOF	O.I.	C.G.	H.G.
8.8	99.0	36.6	At1g67970	843125	AT-HSFA8	member of Heat Stress Transcription Factor (Hsf) family	O.I.	C.G.	H.G.
8.7	99.0	353.8	At2g23120	816844	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	O.I.	C.G.	H.G.
8.7	99.0	84.4	At2g30550	817604	lipase class 3 family protein	F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;PFOBMV	O.I.	C.G.	H.G.
8.6	99.0	34.0	At1g12990	837857	glycosyl transferase family 17 protein	F:transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity;P:protein amino acid N-linked glycosylation;C:membrane;OPMBFV	O.I.	C.G.	H.G.

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GSM ID	GSM157312
Assay name	Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1
GSE experiment	GSE6825: Differential gene expression patterns in potassium-starved and Caesium-treated plants

Microarray experiments to specifically-expressed genes

GSM ID GSM157312 Assay name Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1 GSE experiment GSE6825: Differential gene expression patterns in potassium-starved and Caesium-treated plants

GSM ID GSM157312

Assay name Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1

GSE experiment GSE6825: Differential gene expression patterns in potassium-starved and Caesium-treated plants